RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 USP17L10C9JJH3 530 aa6.97□□□□□ -1.29
CLK1-204ENST00000432425 USP17L13C9JLJ4 530 aa6.97□□□□□ -1.29
CLK1-204ENST00000432425 USP17L12C9JPN9 530 aa6.97□□□□□ -1.29
CLK1-204ENST00000432425 USP17L11C9JVI0 530 aa6.97□□□□□ -1.29
CLK1-204ENST00000432425 USP17L21D6R901 530 aa6.97□□□□□ -1.29
CLK1-204ENST00000432425 USP17L18D6R9N7 530 aa6.97□□□□□ -1.29
CLK1-204ENST00000432425 USP17L22D6RA61 530 aa6.97□□□□□ -1.29
CLK1-204ENST00000432425 USP17L17D6RBQ6 530 aa6.97□□□□□ -1.29
CLK1-204ENST00000432425 USP17L19D6RCP7 530 aa6.97□□□□□ -1.29
CLK1-204ENST00000432425 USP17L20D6RJB6 530 aa6.97□□□□□ -1.29
CLK1-204ENST00000432425 SEC13P55735 322 aa6.97□□□□□ -1.29
CLK1-204ENST00000432425 USP17L24Q0WX57 530 aa6.97□□□□□ -1.29
CLK1-204ENST00000432425 GAS6Q14393 721 aa6.97□□□□□ -1.29
CLK1-204ENST00000432425 CRTC2Q53ET0 693 aaPredicted RBP6.97□□□□□ -1.29
CLK1-204ENST00000432425 TBCELQ5QJ74 424 aa6.97□□□□□ -1.29
CLK1-204ENST00000432425 ZNF295-AS1Q8N0V1 137 aa6.97□□□□□ -1.29
CLK1-204ENST00000432425 CRISPLD1Q9H336 500 aa6.97□□□□□ -1.29
CLK1-204ENST00000432425 ZDHHC3Q9NYG2 299 aa6.97□□□□□ -1.29
CLK1-204ENST00000432425 ZNF232Q9UNY5 417 aa6.97□□□□□ -1.29
CLK1-204ENST00000432425 PHF24Q9UPV7 400 aa6.97□□□□□ -1.29
CLK1-204ENST00000432425 ATP4AP20648 1035 aa6.96□□□□□ -1.29
CLK1-204ENST00000432425 RFX1P22670 979 aa6.96□□□□□ -1.29
CLK1-204ENST00000432425 PTK7Q13308 1070 aa6.96□□□□□ -1.29
CLK1-204ENST00000432425 TEAD4Q15561 434 aa6.96□□□□□ -1.29
CLK1-204ENST00000432425 ARSJQ5FYB0 599 aaPredicted RBP6.96□□□□□ -1.29
CLK1-204ENST00000432425 C14orf37Q86TY3 774 aa6.96□□□□□ -1.29
CLK1-204ENST00000432425 TSEN2Q8NCE0 465 aaKnown RBP6.96□□□□□ -1.29
CLK1-204ENST00000432425 MBIPQ9NS73 344 aa6.96□□□□□ -1.29
CLK1-204ENST00000432425 PARP3Q9Y6F1 533 aa6.96□□□□□ -1.29
CLK1-204ENST00000432425 LORP23490 312 aaPredicted RBP6.96□□□□□ -1.3
CLK1-204ENST00000432425 NOS2P35228 1153 aa6.96□□□□□ -1.3
CLK1-204ENST00000432425 DPYDQ12882 1025 aa6.96□□□□□ -1.3
CLK1-204ENST00000432425 CCDC97Q96F63 343 aaPredicted RBP6.96□□□□□ -1.3
CLK1-204ENST00000432425 TSPAN10Q9H1Z9 355 aaPredicted RBP6.96□□□□□ -1.3
CLK1-204ENST00000432425 NSFL1CQ9UNZ2 370 aaKnown RBP6.96□□□□□ -1.3
CLK1-204ENST00000432425 SERTM1A2A2V5 107 aa6.95□□□□□ -1.3
CLK1-204ENST00000432425 DKK1O94907 266 aa6.95□□□□□ -1.3
CLK1-204ENST00000432425 THBS1P07996 1170 aa6.95□□□□□ -1.3
CLK1-204ENST00000432425 MX2P20592 715 aa6.95□□□□□ -1.3
CLK1-204ENST00000432425 PSMA6P60900 246 aaKnown RBP6.95□□□□□ -1.3
CLK1-204ENST00000432425 SRSF11Q05519 484 aaKnown RBP6.95□□□□□ -1.3
CLK1-204ENST00000432425 FIGNL1Q6PIW4 674 aa6.95□□□□□ -1.3
CLK1-204ENST00000432425 BICDL1Q6ZP65 573 aa6.95□□□□□ -1.3
CLK1-204ENST00000432425 ANKMY2Q8IV38 441 aa6.95□□□□□ -1.3
CLK1-204ENST00000432425 ZDHHC1Q8WTX9 485 aa6.95□□□□□ -1.3
CLK1-204ENST00000432425 L3MBTL2Q969R5 705 aa6.95□□□□□ -1.3
CLK1-204ENST00000432425 CFHR5Q9BXR6 569 aa6.95□□□□□ -1.3
CLK1-204ENST00000432425 GJA3Q9Y6H8 435 aa6.95□□□□□ -1.3
CLK1-204ENST00000432425 ADAMTS2O95450 1211 aa6.94□□□□□ -1.3
CLK1-204ENST00000432425 CDCA8Q53HL2 280 aa6.94□□□□□ -1.3
CLK1-204ENST00000432425 NLRP8Q86W28 1048 aa6.94□□□□□ -1.3
CLK1-204ENST00000432425 HINFPQ9BQA5 517 aa6.94□□□□□ -1.3
CLK1-204ENST00000432425 A0A1W2PNR3 127 aa6.93□□□□□ -1.3
CLK1-204ENST00000432425 PPP1R12BO60237 982 aaPredicted RBP6.93□□□□□ -1.3
CLK1-204ENST00000432425 SLURP2P0DP57 97 aa6.93□□□□□ -1.3
CLK1-204ENST00000432425 TXLNAP40222 546 aa6.93□□□□□ -1.3
CLK1-204ENST00000432425 ATXN7L1Q9ULK2 861 aaPredicted RBP6.93□□□□□ -1.3
CLK1-204ENST00000432425 IGF1RP08069 1367 aa6.93□□□□□ -1.3
CLK1-204ENST00000432425 SVOPQ8N4V2 548 aa6.93□□□□□ -1.3
CLK1-204ENST00000432425 ZIC5Q96T25 663 aa6.93□□□□□ -1.3
CLK1-204ENST00000432425 SERPINA10Q9UK55 444 aa6.93□□□□□ -1.3
CLK1-204ENST00000432425 ARID3CA6NKF2 412 aa6.92□□□□□ -1.3
CLK1-204ENST00000432425 UBAP2LQ14157 1087 aaKnown RBP6.92□□□□□ -1.3
CLK1-204ENST00000432425 FAM200AQ8TCP9 573 aa6.92□□□□□ -1.3
CLK1-204ENST00000432425 SCG3Q8WXD2 468 aaKnown RBP6.92□□□□□ -1.3
CLK1-204ENST00000432425 ABHD17AQ96GS6 310 aa6.92□□□□□ -1.3
CLK1-204ENST00000432425 ZCCHC2Q9C0B9 1178 aaKnown RBP6.92□□□□□ -1.3
CLK1-204ENST00000432425 NEUROD4Q9HD90 331 aa6.92□□□□□ -1.3
CLK1-204ENST00000432425 ATAD2Q6PL18 1390 aa6.92□□□□□ -1.3
CLK1-204ENST00000432425 EML1O00423 815 aa6.91□□□□□ -1.3
CLK1-204ENST00000432425 ATXN7O15265 892 aaPredicted RBP6.91□□□□□ -1.3
CLK1-204ENST00000432425 SH3PXD2AQ5TCZ1 1133 aa6.91□□□□□ -1.3
CLK1-204ENST00000432425 GAS2L2Q8NHY3 880 aa6.91□□□□□ -1.3
CLK1-204ENST00000432425 RHPN1Q8TCX5 695 aa6.91□□□□□ -1.3
CLK1-204ENST00000432425 CHMP7Q8WUX9 453 aaPredicted RBP6.91□□□□□ -1.3
CLK1-204ENST00000432425 PCDHGC4Q9Y5F7 938 aa6.91□□□□□ -1.3
CLK1-204ENST00000432425 BNIP3LO60238 219 aa6.9□□□□□ -1.3
CLK1-204ENST00000432425 FGFR3P22607 806 aa6.9□□□□□ -1.3
CLK1-204ENST00000432425 MAP2K3P46734 347 aa6.9□□□□□ -1.3
CLK1-204ENST00000432425 MAP3K10Q02779 954 aa6.9□□□□□ -1.3
CLK1-204ENST00000432425 ZNF385CQ66K41 422 aaPredicted RBP6.9□□□□□ -1.3
CLK1-204ENST00000432425 GPC6Q9Y625 555 aaPredicted RBP6.9□□□□□ -1.3
CLK1-204ENST00000432425 LGR5O75473 907 aa6.9□□□□□ -1.31
CLK1-204ENST00000432425 HIRAP54198 1017 aaPredicted RBP6.9□□□□□ -1.31
CLK1-204ENST00000432425 SUZ12Q15022 739 aaKnown RBP6.9□□□□□ -1.31
CLK1-204ENST00000432425 WHAMMQ8TF30 809 aa6.9□□□□□ -1.31
CLK1-204ENST00000432425 ARXQ96QS3 562 aa6.9□□□□□ -1.31
CLK1-204ENST00000432425 NDFIP2Q9NV92 336 aa6.9□□□□□ -1.31
CLK1-204ENST00000432425 NOVA2Q9UNW9 492 aaKnown RBP6.9□□□□□ -1.31
CLK1-204ENST00000432425 HCN4Q9Y3Q4 1203 aa6.9□□□□□ -1.31
CLK1-204ENST00000432425 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.89□□□□□ -1.31
CLK1-204ENST00000432425 DCDC2BA2VCK2 349 aa6.89□□□□□ -1.31
CLK1-204ENST00000432425 KHNYNO15037 678 aaKnown RBP6.89□□□□□ -1.31
CLK1-204ENST00000432425 C21orf2O43822 256 aa6.89□□□□□ -1.31
CLK1-204ENST00000432425 BMP4P12644 408 aa6.89□□□□□ -1.31
CLK1-204ENST00000432425 C1orf53Q5VUE5 145 aa6.89□□□□□ -1.31
CLK1-204ENST00000432425 STAG2Q8N3U4 1231 aa6.89□□□□□ -1.31
CLK1-204ENST00000432425 PHACTR1Q9C0D0 580 aa6.89□□□□□ -1.31
CLK1-204ENST00000432425 IGFBP4P22692 258 aa6.88□□□□□ -1.31
CLK1-204ENST00000432425 SAMD5Q5TGI4 173 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms