RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 YBX3P16989 372 aaKnown RBP eCLIP11.45□□□□□ -0.58
CDH13-203ENST00000431540 KCNQ4P56696 695 aa11.45□□□□□ -0.58
CDH13-203ENST00000431540 SIK1P57059 783 aa11.45□□□□□ -0.58
CDH13-203ENST00000431540 TGFB2P61812 414 aa11.45□□□□□ -0.58
CDH13-203ENST00000431540 KLHL34Q8N239 644 aa11.45□□□□□ -0.58
CDH13-203ENST00000431540 NLGN1Q8N2Q7 840 aa11.45□□□□□ -0.58
CDH13-203ENST00000431540 TOGARAM1Q9Y4F4 1720 aa11.45□□□□□ -0.58
CDH13-203ENST00000431540 TRIM26Q12899 539 aaPredicted RBP11.44□□□□□ -0.58
CDH13-203ENST00000431540 TMOD3Q9NYL9 352 aa11.44□□□□□ -0.58
CDH13-203ENST00000431540 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.43□□□□□ -0.58
CDH13-203ENST00000431540 AMOTQ4VCS5 1084 aa11.43□□□□□ -0.58
CDH13-203ENST00000431540 USHBP1Q8N6Y0 703 aa11.43□□□□□ -0.58
CDH13-203ENST00000431540 EYA1Q99502 592 aa11.43□□□□□ -0.58
CDH13-203ENST00000431540 GPBP1L1Q9HC44 474 aaPredicted RBP11.43□□□□□ -0.58
CDH13-203ENST00000431540 POLKQ9UBT6 870 aa11.43□□□□□ -0.58
CDH13-203ENST00000431540 PCDHB8Q9UN66 801 aa11.43□□□□□ -0.58
CDH13-203ENST00000431540 ADCY9O60503 1353 aa11.42□□□□□ -0.58
CDH13-203ENST00000431540 PYGBP11216 843 aa11.42□□□□□ -0.58
CDH13-203ENST00000431540 PHKG2P15735 406 aa11.42□□□□□ -0.58
CDH13-203ENST00000431540 DCAF5Q96JK2 942 aa11.42□□□□□ -0.58
CDH13-203ENST00000431540 ATP6V1AP38606 617 aa11.41□□□□□ -0.58
CDH13-203ENST00000431540 TRAPPC3LQ5T215 181 aa11.41□□□□□ -0.58
CDH13-203ENST00000431540 EMILIN1Q9Y6C2 1016 aa11.41□□□□□ -0.58
CDH13-203ENST00000431540 ARFGEF1Q9Y6D6 1849 aa11.41□□□□□ -0.58
CDH13-203ENST00000431540 CICQ96RK0 1608 aaPredicted RBP11.41□□□□□ -0.58
CDH13-203ENST00000431540 CEP350Q5VT06 3117 aa11.41□□□□□ -0.58
CDH13-203ENST00000431540 MKRN3Q13064 507 aaKnown RBP11.4□□□□□ -0.58
CDH13-203ENST00000431540 PLEKHO1Q53GL0 409 aaPredicted RBP11.4□□□□□ -0.58
CDH13-203ENST00000431540 RTCBQ9Y3I0 505 aaKnown RBP11.4□□□□□ -0.58
CDH13-203ENST00000431540 ATP10DQ9P241 1426 aa11.4□□□□□ -0.58
CDH13-203ENST00000431540 COL5A3P25940 1745 aaPredicted RBP11.4□□□□□ -0.58
CDH13-203ENST00000431540 BRCA1P38398 1863 aaKnown RBP11.4□□□□□ -0.59
CDH13-203ENST00000431540 IGSF1Q8N6C5 1336 aa11.39□□□□□ -0.59
CDH13-203ENST00000431540 HOXB3P14651 431 aaPredicted RBP11.39□□□□□ -0.59
CDH13-203ENST00000431540 HOXB1P14653 301 aaPredicted RBP11.39□□□□□ -0.59
CDH13-203ENST00000431540 HSPA6P17066 643 aa11.39□□□□□ -0.59
CDH13-203ENST00000431540 IFFO2Q5TF58 517 aa11.39□□□□□ -0.59
CDH13-203ENST00000431540 ATG3Q9NT62 314 aa11.39□□□□□ -0.59
CDH13-203ENST00000431540 MYH14Q7Z406 1995 aaKnown RBP11.39□□□□□ -0.59
CDH13-203ENST00000431540 CNTNAP4Q9C0A0 1308 aa11.38□□□□□ -0.59
CDH13-203ENST00000431540 PPM1GO15355 546 aaPredicted RBP11.38□□□□□ -0.59
CDH13-203ENST00000431540 RPS6KA4O75676 772 aa11.38□□□□□ -0.59
CDH13-203ENST00000431540 MSL1Q68DK7 614 aa11.38□□□□□ -0.59
CDH13-203ENST00000431540 LINC00116Q8NCU8 138 aa11.38□□□□□ -0.59
CDH13-203ENST00000431540 ASAP1Q9ULH1 1129 aa11.38□□□□□ -0.59
CDH13-203ENST00000431540 GNPATO15228 680 aa11.37□□□□□ -0.59
CDH13-203ENST00000431540 EIF4A2Q14240 407 aaKnown RBP11.37□□□□□ -0.59
CDH13-203ENST00000431540 KIAA1551Q9HCM1 1747 aa11.36□□□□□ -0.59
CDH13-203ENST00000431540 GOLGA2Q08379 1002 aa11.36□□□□□ -0.59
CDH13-203ENST00000431540 ITPK1Q13572 414 aa11.36□□□□□ -0.59
CDH13-203ENST00000431540 CCDC87Q9NVE4 849 aa11.36□□□□□ -0.59
CDH13-203ENST00000431540 KDRP35968 1356 aa11.36□□□□□ -0.59
CDH13-203ENST00000431540 SCN11AQ9UI33 1791 aa11.36□□□□□ -0.59
CDH13-203ENST00000431540 TOMM70O94826 608 aa11.35□□□□□ -0.59
CDH13-203ENST00000431540 MMP10P09238 476 aa11.35□□□□□ -0.59
CDH13-203ENST00000431540 RFC4P35249 363 aa11.35□□□□□ -0.59
CDH13-203ENST00000431540 DCAF8Q5TAQ9 597 aa11.35□□□□□ -0.59
CDH13-203ENST00000431540 N4BP2Q86UW6 1770 aaPredicted RBP11.35□□□□□ -0.59
CDH13-203ENST00000431540 SBF1O95248 1867 aa11.35□□□□□ -0.59
CDH13-203ENST00000431540 C4AP0C0L4 1744 aa11.35□□□□□ -0.59
CDH13-203ENST00000431540 PHF14O94880 888 aa11.34□□□□□ -0.59
CDH13-203ENST00000431540 APLP1P51693 650 aa11.34□□□□□ -0.59
CDH13-203ENST00000431540 CABP4P57796 275 aa11.34□□□□□ -0.59
CDH13-203ENST00000431540 EIF4G2P78344 907 aaKnown RBP eCLIP11.34□□□□□ -0.59
CDH13-203ENST00000431540 AMIGO3Q86WK7 504 aa11.34□□□□□ -0.59
CDH13-203ENST00000431540 ARHGEF1Q92888 912 aaKnown RBP11.34□□□□□ -0.59
CDH13-203ENST00000431540 PARP3Q9Y6F1 533 aa11.34□□□□□ -0.59
CDH13-203ENST00000431540 VIRMAQ69YN4 1812 aaKnown RBP11.34□□□□□ -0.59
CDH13-203ENST00000431540 KIF3CO14782 793 aa11.33□□□□□ -0.6
CDH13-203ENST00000431540 GYS1P13807 737 aa11.33□□□□□ -0.6
CDH13-203ENST00000431540 MTHFSP49914 203 aa11.33□□□□□ -0.6
CDH13-203ENST00000431540 ZNF710Q8N1W2 664 aa11.33□□□□□ -0.6
CDH13-203ENST00000431540 C10orf71Q711Q0 1435 aa11.33□□□□□ -0.6
CDH13-203ENST00000431540 ZC3H4Q9UPT8 1303 aaKnown RBP11.33□□□□□ -0.6
CDH13-203ENST00000431540 PXDNLA1KZ92 1463 aa11.32□□□□□ -0.6
CDH13-203ENST00000431540 C1orf141Q5JVX7 400 aa11.32□□□□□ -0.6
CDH13-203ENST00000431540 PIM2Q9P1W9 311 aa11.32□□□□□ -0.6
CDH13-203ENST00000431540 VSIG10Q8N0Z9 540 aa11.31□□□□□ -0.6
CDH13-203ENST00000431540 SLC4A9Q96Q91 983 aa11.31□□□□□ -0.6
CDH13-203ENST00000431540 PANK3Q9H999 370 aa11.31□□□□□ -0.6
CDH13-203ENST00000431540 PDZRN3Q9UPQ7 1066 aa11.31□□□□□ -0.6
CDH13-203ENST00000431540 KCNA3P22001 575 aa11.3□□□□□ -0.6
CDH13-203ENST00000431540 FSTL1Q12841 308 aa11.3□□□□□ -0.6
CDH13-203ENST00000431540 AKAP4Q5JQC9 854 aa11.3□□□□□ -0.6
CDH13-203ENST00000431540 ZNF530Q6P9A1 599 aaPredicted RBP11.3□□□□□ -0.6
CDH13-203ENST00000431540 NFATC2IPQ8NCF5 419 aa11.3□□□□□ -0.6
CDH13-203ENST00000431540 RBM46Q8TBY0 533 aaKnown RBP11.3□□□□□ -0.6
CDH13-203ENST00000431540 TM4SF1P30408 202 aa11.29□□□□□ -0.6
CDH13-203ENST00000431540 MORC1Q86VD1 984 aa11.29□□□□□ -0.6
CDH13-203ENST00000431540 BCS1LQ9Y276 419 aa11.29□□□□□ -0.6
CDH13-203ENST00000431540 KNSTRNQ9Y448 316 aa11.29□□□□□ -0.6
CDH13-203ENST00000431540 KDM2BQ8NHM5 1336 aa11.29□□□□□ -0.6
CDH13-203ENST00000431540 KDM6AO15550 1401 aaPredicted RBP11.28□□□□□ -0.6
CDH13-203ENST00000431540 A0A0G2JLW4 131 aa11.28□□□□□ -0.6
CDH13-203ENST00000431540 IL13P35225 146 aa11.28□□□□□ -0.6
CDH13-203ENST00000431540 CRKLP46109 303 aaKnown RBP11.28□□□□□ -0.6
CDH13-203ENST00000431540 DALRD3Q5D0E6 543 aaKnown RBP11.28□□□□□ -0.6
CDH13-203ENST00000431540 ARHGAP27Q6ZUM4 889 aa11.28□□□□□ -0.6
CDH13-203ENST00000431540 USP42Q9H9J4 1324 aaKnown RBP11.28□□□□□ -0.6
CDH13-203ENST00000431540 CCDC88AQ3V6T2 1871 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms