RNA–Protein interactions for RNA: ENST00000431374.6

TSPAN9-203, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-203ENST00000431374 CCDC146Q8IYE0 955 aa20.21■□□□□ 0.83
TSPAN9-203ENST00000431374 THUMPD2Q9BTF0 503 aaKnown RBP20.21■□□□□ 0.83
TSPAN9-203ENST00000431374 ADAMTS8Q9UP79 889 aa20.21■□□□□ 0.83
TSPAN9-203ENST00000431374 CD2APQ9Y5K6 639 aa20.21■□□□□ 0.83
TSPAN9-203ENST00000431374 TMPOP42166 694 aaKnown RBP20.2■□□□□ 0.82
TSPAN9-203ENST00000431374 UTRNP46939 3433 aa20.2■□□□□ 0.82
TSPAN9-203ENST00000431374 RIPK4P57078 832 aa20.19■□□□□ 0.82
TSPAN9-203ENST00000431374 PNISRQ8TF01 805 aaKnown RBP20.19■□□□□ 0.82
TSPAN9-203ENST00000431374 MIS18AQ9NYP9 233 aa20.19■□□□□ 0.82
TSPAN9-203ENST00000431374 COL15A1P39059 1388 aa20.19■□□□□ 0.82
TSPAN9-203ENST00000431374 CANXP27824 592 aaKnown RBP20.18■□□□□ 0.82
TSPAN9-203ENST00000431374 FKBP8Q14318 412 aa20.18■□□□□ 0.82
TSPAN9-203ENST00000431374 RUNDC1Q96C34 613 aa20.18■□□□□ 0.82
TSPAN9-203ENST00000431374 SNRPA1P09661 255 aaKnown RBP20.17■□□□□ 0.82
TSPAN9-203ENST00000431374 EIF5P55010 431 aaKnown RBP20.17■□□□□ 0.82
TSPAN9-203ENST00000431374 PRAMEF22A3QJZ6 481 aa20.16■□□□□ 0.82
TSPAN9-203ENST00000431374 ZPR1O75312 459 aa20.16■□□□□ 0.82
TSPAN9-203ENST00000431374 LMOD3Q0VAK6 560 aa20.16■□□□□ 0.82
TSPAN9-203ENST00000431374 USPL1Q5W0Q7 1092 aa20.16■□□□□ 0.82
TSPAN9-203ENST00000431374 NARFQ9UHQ1 456 aa20.16■□□□□ 0.82
TSPAN9-203ENST00000431374 RRP7AQ9Y3A4 280 aaKnown RBP20.16■□□□□ 0.82
TSPAN9-203ENST00000431374 A1BGP04217 495 aa20.15■□□□□ 0.82
TSPAN9-203ENST00000431374 USP16Q9Y5T5 823 aa20.15■□□□□ 0.82
TSPAN9-203ENST00000431374 C4AP0C0L4 1744 aa20.15■□□□□ 0.82
TSPAN9-203ENST00000431374 A0A087WZG4 1122 aa20.14■□□□□ 0.81
TSPAN9-203ENST00000431374 IL6STP40189 918 aaPredicted RBP20.14■□□□□ 0.81
TSPAN9-203ENST00000431374 GOLGB1Q14789 3259 aaKnown RBP20.14■□□□□ 0.81
TSPAN9-203ENST00000431374 DDR1Q08345 913 aa20.13■□□□□ 0.81
TSPAN9-203ENST00000431374 CCDC184Q52MB2 194 aa20.13■□□□□ 0.81
TSPAN9-203ENST00000431374 BCL2L12Q9HB09 334 aa20.13■□□□□ 0.81
TSPAN9-203ENST00000431374 PARP3Q9Y6F1 533 aa20.13■□□□□ 0.81
TSPAN9-203ENST00000431374 C10orf71Q711Q0 1435 aa20.12■□□□□ 0.81
TSPAN9-203ENST00000431374 ANP32CO43423 234 aa20.12■□□□□ 0.81
TSPAN9-203ENST00000431374 EIF4A1P60842 406 aaKnown RBP20.12■□□□□ 0.81
TSPAN9-203ENST00000431374 NEUROD2Q15784 382 aa20.12■□□□□ 0.81
TSPAN9-203ENST00000431374 GPR162Q16538 588 aa20.12■□□□□ 0.81
TSPAN9-203ENST00000431374 TM4SF1P30408 202 aa20.11■□□□□ 0.81
TSPAN9-203ENST00000431374 TRIM35Q9UPQ4 493 aa20.11■□□□□ 0.81
TSPAN9-203ENST00000431374 GIGYF1O75420 1035 aaPredicted RBP20.1■□□□□ 0.81
TSPAN9-203ENST00000431374 PELP1Q8IZL8 1130 aaKnown RBP20.1■□□□□ 0.81
TSPAN9-203ENST00000431374 BABAM1Q9NWV8 329 aa20.1■□□□□ 0.81
TSPAN9-203ENST00000431374 TSPYL4Q9UJ04 414 aa20.1■□□□□ 0.81
TSPAN9-203ENST00000431374 ZNF330Q9Y3S2 320 aaPredicted RBP20.1■□□□□ 0.81
TSPAN9-203ENST00000431374 DLG5Q8TDM6 1919 aa20.1■□□□□ 0.81
TSPAN9-203ENST00000431374 POLRMTO00411 1230 aaKnown RBP20.09■□□□□ 0.81
TSPAN9-203ENST00000431374 PIP4K2AP48426 406 aaPredicted RBP20.09■□□□□ 0.81
TSPAN9-203ENST00000431374 NFIXQ14938 502 aa20.09■□□□□ 0.81
TSPAN9-203ENST00000431374 NBPF26B4DH59 902 aa20.08■□□□□ 0.81
TSPAN9-203ENST00000431374 YBX3P16989 372 aaKnown RBP eCLIP20.08■□□□□ 0.81
TSPAN9-203ENST00000431374 NBPF10Q6P3W6 841 aaKnown RBP20.08■□□□□ 0.81
TSPAN9-203ENST00000431374 NBPF15Q8N660 670 aa20.08■□□□□ 0.81
TSPAN9-203ENST00000431374 TBC1D2BQ9UPU7 963 aa20.08■□□□□ 0.81
TSPAN9-203ENST00000431374 PXDNLA1KZ92 1463 aa20.07■□□□□ 0.8
TSPAN9-203ENST00000431374 NPM2Q86SE8 214 aaKnown RBP20.07■□□□□ 0.8
TSPAN9-203ENST00000431374 KDM3BQ7LBC6 1761 aa20.07■□□□□ 0.8
TSPAN9-203ENST00000431374 APAF1O14727 1248 aa20.06■□□□□ 0.8
TSPAN9-203ENST00000431374 CAMTA2O94983 1202 aa20.06■□□□□ 0.8
TSPAN9-203ENST00000431374 TGFB2P61812 414 aa20.06■□□□□ 0.8
TSPAN9-203ENST00000431374 YY1P25490 414 aa20.05■□□□□ 0.8
TSPAN9-203ENST00000431374 DZIP3Q86Y13 1208 aaKnown RBP20.05■□□□□ 0.8
TSPAN9-203ENST00000431374 MRS2Q9HD23 443 aa20.05■□□□□ 0.8
TSPAN9-203ENST00000431374 CHL1O00533 1208 aa20.04■□□□□ 0.8
TSPAN9-203ENST00000431374 GRIN3BO60391 1043 aa20.04■□□□□ 0.8
TSPAN9-203ENST00000431374 TBC1D9BQ66K14 1250 aa20.03■□□□□ 0.8
TSPAN9-203ENST00000431374 BICDL1Q6ZP65 573 aa20.03■□□□□ 0.8
TSPAN9-203ENST00000431374 A0A0G2JLW4 131 aa20.02■□□□□ 0.8
TSPAN9-203ENST00000431374 SERPINB2P05120 415 aa20.02■□□□□ 0.8
TSPAN9-203ENST00000431374 DPEP1P16444 411 aa20.02■□□□□ 0.8
TSPAN9-203ENST00000431374 WWC3Q9ULE0 1092 aa20.02■□□□□ 0.8
TSPAN9-203ENST00000431374 SCN7AQ01118 1682 aa20.01■□□□□ 0.79
TSPAN9-203ENST00000431374 LAS1LQ9Y4W2 734 aaKnown RBP20■□□□□ 0.79
TSPAN9-203ENST00000431374 ERBB4Q15303 1308 aa20■□□□□ 0.79
TSPAN9-203ENST00000431374 KIF13BQ9NQT8 1826 aa19.99■□□□□ 0.79
TSPAN9-203ENST00000431374 RGL2O15211 777 aa19.99■□□□□ 0.79
TSPAN9-203ENST00000431374 KCNA3P22001 575 aa19.99■□□□□ 0.79
TSPAN9-203ENST00000431374 CLEC4GQ6UXB4 293 aa19.99■□□□□ 0.79
TSPAN9-203ENST00000431374 CFAP44Q96MT7 982 aa19.99■□□□□ 0.79
TSPAN9-203ENST00000431374 LAMB4A4D0S4 1761 aa19.98■□□□□ 0.79
TSPAN9-203ENST00000431374 CARMIL3Q8ND23 1372 aa19.98■□□□□ 0.79
TSPAN9-203ENST00000431374 ZNF652Q9Y2D9 606 aa19.98■□□□□ 0.79
TSPAN9-203ENST00000431374 KIAA1551Q9HCM1 1747 aa19.98■□□□□ 0.79
TSPAN9-203ENST00000431374 ZNF853P0CG23 659 aa19.97■□□□□ 0.79
TSPAN9-203ENST00000431374 EIF2S2P20042 333 aaKnown RBP19.97■□□□□ 0.79
TSPAN9-203ENST00000431374 CALD1Q05682 793 aaKnown RBP19.97■□□□□ 0.79
TSPAN9-203ENST00000431374 KRT24Q2M2I5 525 aa19.97■□□□□ 0.79
TSPAN9-203ENST00000431374 SETDB2Q96T68 719 aa19.97■□□□□ 0.79
TSPAN9-203ENST00000431374 MYL6BP14649 208 aa19.96■□□□□ 0.79
TSPAN9-203ENST00000431374 CHRNA5P30532 468 aa19.96■□□□□ 0.79
TSPAN9-203ENST00000431374 NGEFQ8N5V2 710 aa19.96■□□□□ 0.79
TSPAN9-203ENST00000431374 IFT57Q9NWB7 429 aa19.96■□□□□ 0.79
TSPAN9-203ENST00000431374 PDIA6Q15084 440 aa19.95■□□□□ 0.78
TSPAN9-203ENST00000431374 PRR5LQ6MZQ0 368 aa19.95■□□□□ 0.78
TSPAN9-203ENST00000431374 TTLL7Q6ZT98 887 aa19.95■□□□□ 0.78
TSPAN9-203ENST00000431374 LRP10Q7Z4F1 713 aa19.95■□□□□ 0.78
TSPAN9-203ENST00000431374 MBIPQ9NS73 344 aa19.95■□□□□ 0.78
TSPAN9-203ENST00000431374 BCS1LQ9Y276 419 aa19.95■□□□□ 0.78
TSPAN9-203ENST00000431374 NRXN2Q9P2S2 1712 aa19.94■□□□□ 0.78
TSPAN9-203ENST00000431374 HLFQ16534 295 aa19.94■□□□□ 0.78
TSPAN9-203ENST00000431374 PROSER3Q2NL68 480 aa19.94■□□□□ 0.78
TSPAN9-203ENST00000431374 PIM2Q9P1W9 311 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms