RNA–Protein interactions for RNA: ENST00000430978.6

LINC00454-202, long intergenic non-protein coding RNA 454, humanhuman

TSL 5 BASIC

Gene LINC00454, Length 1,327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00454-202ENST00000430978 CANXP27824 592 aaKnown RBP28.83■■■□□ 2.21
LINC00454-202ENST00000430978 ZBTB1Q9Y2K1 713 aa28.83■■■□□ 2.21
LINC00454-202ENST00000430978 SOS1Q07889 1333 aaPredicted RBP28.82■■■□□ 2.2
LINC00454-202ENST00000430978 YY1P25490 414 aa28.82■■■□□ 2.2
LINC00454-202ENST00000430978 USP42Q9H9J4 1324 aaKnown RBP28.82■■■□□ 2.2
LINC00454-202ENST00000430978 WDR43Q15061 677 aaKnown RBP eCLIP28.81■■■□□ 2.2
LINC00454-202ENST00000430978 TAF7Q15545 349 aaPredicted RBP28.81■■■□□ 2.2
LINC00454-202ENST00000430978 PARP3Q9Y6F1 533 aa28.8■■■□□ 2.2
LINC00454-202ENST00000430978 COL15A1P39059 1388 aa28.79■■■□□ 2.2
LINC00454-202ENST00000430978 CHD4Q14839 1912 aa28.78■■■□□ 2.2
LINC00454-202ENST00000430978 ZNF316A6NFI3 1004 aaPredicted RBP28.78■■■□□ 2.2
LINC00454-202ENST00000430978 FKBP8Q14318 412 aa28.77■■■□□ 2.2
LINC00454-202ENST00000430978 USPL1Q5W0Q7 1092 aa28.77■■■□□ 2.2
LINC00454-202ENST00000430978 MIS18AQ9NYP9 233 aa28.76■■■□□ 2.19
LINC00454-202ENST00000430978 ZNF330Q9Y3S2 320 aaPredicted RBP28.76■■■□□ 2.19
LINC00454-202ENST00000430978 NPM2Q86SE8 214 aaKnown RBP28.75■■■□□ 2.19
LINC00454-202ENST00000430978 NARFQ9UHQ1 456 aa28.75■■■□□ 2.19
LINC00454-202ENST00000430978 SNRPA1P09661 255 aaKnown RBP28.74■■■□□ 2.19
LINC00454-202ENST00000430978 RIPK4P57078 832 aa28.74■■■□□ 2.19
LINC00454-202ENST00000430978 PNISRQ8TF01 805 aaKnown RBP28.74■■■□□ 2.19
LINC00454-202ENST00000430978 THUMPD2Q9BTF0 503 aaKnown RBP28.74■■■□□ 2.19
LINC00454-202ENST00000430978 A0A087WZG4 1122 aa28.73■■■□□ 2.19
LINC00454-202ENST00000430978 A1BGP04217 495 aa28.73■■■□□ 2.19
LINC00454-202ENST00000430978 CCDC146Q8IYE0 955 aa28.73■■■□□ 2.19
LINC00454-202ENST00000430978 EIF5P55010 431 aaKnown RBP28.72■■■□□ 2.19
LINC00454-202ENST00000430978 USP16Q9Y5T5 823 aa28.72■■■□□ 2.19
LINC00454-202ENST00000430978 KIF13BQ9NQT8 1826 aa28.71■■■□□ 2.19
LINC00454-202ENST00000430978 GRIN3BO60391 1043 aa28.7■■■□□ 2.19
LINC00454-202ENST00000430978 YBX3P16989 372 aaKnown RBP eCLIP28.7■■■□□ 2.19
LINC00454-202ENST00000430978 IL6STP40189 918 aaPredicted RBP28.7■■■□□ 2.19
LINC00454-202ENST00000430978 TMPOP42166 694 aaKnown RBP28.7■■■□□ 2.19
LINC00454-202ENST00000430978 ADAMTS8Q9UP79 889 aa28.7■■■□□ 2.19
LINC00454-202ENST00000430978 UTRNP46939 3433 aa28.7■■■□□ 2.18
LINC00454-202ENST00000430978 PRAMEF22A3QJZ6 481 aa28.69■■■□□ 2.18
LINC00454-202ENST00000430978 NEUROD2Q15784 382 aa28.69■■■□□ 2.18
LINC00454-202ENST00000430978 RUNDC1Q96C34 613 aa28.69■■■□□ 2.18
LINC00454-202ENST00000430978 WWC3Q9ULE0 1092 aa28.69■■■□□ 2.18
LINC00454-202ENST00000430978 TM4SF1P30408 202 aa28.69■■■□□ 2.18
LINC00454-202ENST00000430978 LMOD3Q0VAK6 560 aa28.69■■■□□ 2.18
LINC00454-202ENST00000430978 RRP7AQ9Y3A4 280 aaKnown RBP28.69■■■□□ 2.18
LINC00454-202ENST00000430978 N4BP2Q86UW6 1770 aaPredicted RBP28.68■■■□□ 2.18
LINC00454-202ENST00000430978 GOLGB1Q14789 3259 aaKnown RBP28.68■■■□□ 2.18
LINC00454-202ENST00000430978 DDR1Q08345 913 aa28.68■■■□□ 2.18
LINC00454-202ENST00000430978 KDM3BQ7LBC6 1761 aa28.67■■■□□ 2.18
LINC00454-202ENST00000430978 TGFB2P61812 414 aa28.67■■■□□ 2.18
LINC00454-202ENST00000430978 TBC1D2BQ9UPU7 963 aa28.67■■■□□ 2.18
LINC00454-202ENST00000430978 C10orf71Q711Q0 1435 aa28.65■■■□□ 2.18
LINC00454-202ENST00000430978 POLRMTO00411 1230 aaKnown RBP28.65■■■□□ 2.18
LINC00454-202ENST00000430978 PIP4K2AP48426 406 aaPredicted RBP28.65■■■□□ 2.18
LINC00454-202ENST00000430978 NFIXQ14938 502 aa28.65■■■□□ 2.18
LINC00454-202ENST00000430978 BCL2L12Q9HB09 334 aa28.65■■■□□ 2.18
LINC00454-202ENST00000430978 A0A0G2JLW4 131 aa28.64■■■□□ 2.17
LINC00454-202ENST00000430978 BICDL1Q6ZP65 573 aa28.63■■■□□ 2.17
LINC00454-202ENST00000430978 TSPYL4Q9UJ04 414 aa28.63■■■□□ 2.17
LINC00454-202ENST00000430978 AFDNP55196 1824 aaKnown RBP28.62■■■□□ 2.17
LINC00454-202ENST00000430978 PXDNLA1KZ92 1463 aa28.61■■■□□ 2.17
LINC00454-202ENST00000430978 EIF4A1P60842 406 aaKnown RBP28.61■■■□□ 2.17
LINC00454-202ENST00000430978 DZIP3Q86Y13 1208 aaKnown RBP28.61■■■□□ 2.17
LINC00454-202ENST00000430978 LAMB4A4D0S4 1761 aa28.6■■■□□ 2.17
LINC00454-202ENST00000430978 DPEP1P16444 411 aa28.6■■■□□ 2.17
LINC00454-202ENST00000430978 KIAA1551Q9HCM1 1747 aa28.59■■■□□ 2.17
LINC00454-202ENST00000430978 GIGYF1O75420 1035 aaPredicted RBP28.59■■■□□ 2.17
LINC00454-202ENST00000430978 SERPINB2P05120 415 aa28.59■■■□□ 2.17
LINC00454-202ENST00000430978 SCN7AQ01118 1682 aa28.58■■■□□ 2.17
LINC00454-202ENST00000430978 ANP32CO43423 234 aa28.58■■■□□ 2.17
LINC00454-202ENST00000430978 TBC1D9BQ66K14 1250 aa28.57■■■□□ 2.16
LINC00454-202ENST00000430978 BCS1LQ9Y276 419 aa28.57■■■□□ 2.16
LINC00454-202ENST00000430978 NBPF26B4DH59 902 aa28.56■■■□□ 2.16
LINC00454-202ENST00000430978 CAMTA2O94983 1202 aa28.56■■■□□ 2.16
LINC00454-202ENST00000430978 NBPF10Q6P3W6 841 aaKnown RBP28.56■■■□□ 2.16
LINC00454-202ENST00000430978 NBPF15Q8N660 670 aa28.56■■■□□ 2.16
LINC00454-202ENST00000430978 BABAM1Q9NWV8 329 aa28.56■■■□□ 2.16
LINC00454-202ENST00000430978 LAS1LQ9Y4W2 734 aaKnown RBP28.55■■■□□ 2.16
LINC00454-202ENST00000430978 SETDB2Q96T68 719 aa28.54■■■□□ 2.16
LINC00454-202ENST00000430978 TRIM35Q9UPQ4 493 aa28.54■■■□□ 2.16
LINC00454-202ENST00000430978 NRXN2Q9P2S2 1712 aa28.53■■■□□ 2.16
LINC00454-202ENST00000430978 BCORQ6W2J9 1755 aa28.53■■■□□ 2.16
LINC00454-202ENST00000430978 PIM2Q9P1W9 311 aa28.53■■■□□ 2.16
LINC00454-202ENST00000430978 BRCA1P38398 1863 aaKnown RBP28.52■■■□□ 2.16
LINC00454-202ENST00000430978 NGEFQ8N5V2 710 aa28.52■■■□□ 2.16
LINC00454-202ENST00000430978 ZNF652Q9Y2D9 606 aa28.52■■■□□ 2.16
LINC00454-202ENST00000430978 APAF1O14727 1248 aa28.51■■■□□ 2.15
LINC00454-202ENST00000430978 NPHP1O15259 732 aa28.51■■■□□ 2.15
LINC00454-202ENST00000430978 KCNA3P22001 575 aa28.51■■■□□ 2.15
LINC00454-202ENST00000430978 CHRNA5P30532 468 aa28.51■■■□□ 2.15
LINC00454-202ENST00000430978 CCDC184Q52MB2 194 aa28.51■■■□□ 2.15
LINC00454-202ENST00000430978 ZNF784Q8NCA9 323 aaPredicted RBP28.5■■■□□ 2.15
LINC00454-202ENST00000430978 CARMIL3Q8ND23 1372 aa28.5■■■□□ 2.15
LINC00454-202ENST00000430978 MYL6BP14649 208 aa28.49■■■□□ 2.15
LINC00454-202ENST00000430978 CLEC4GQ6UXB4 293 aa28.49■■■□□ 2.15
LINC00454-202ENST00000430978 EIF2S2P20042 333 aaKnown RBP28.48■■■□□ 2.15
LINC00454-202ENST00000430978 CHL1O00533 1208 aa28.47■■■□□ 2.15
LINC00454-202ENST00000430978 DALRD3Q5D0E6 543 aaKnown RBP28.47■■■□□ 2.15
LINC00454-202ENST00000430978 MRS2Q9HD23 443 aa28.46■■■□□ 2.15
LINC00454-202ENST00000430978 ARFGEF1Q9Y6D6 1849 aa28.46■■■□□ 2.15
LINC00454-202ENST00000430978 ARHGAP27Q6ZUM4 889 aa28.45■■■□□ 2.15
LINC00454-202ENST00000430978 KIF6Q6ZMV9 814 aa28.44■■■□□ 2.14
LINC00454-202ENST00000430978 C2CD5Q86YS7 1000 aa28.44■■■□□ 2.14
LINC00454-202ENST00000430978 CCDC24Q8N4L8 307 aa28.44■■■□□ 2.14
LINC00454-202ENST00000430978 CNBD1Q8NA66 436 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms