RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 ZPR1O75312 459 aa12.94□□□□□ -0.34
HDAC6-207ENST00000430858 SNRPA1P09661 255 aaKnown RBP12.94□□□□□ -0.34
HDAC6-207ENST00000430858 CANXP27824 592 aaKnown RBP12.94□□□□□ -0.34
HDAC6-207ENST00000430858 RIPK4P57078 832 aa12.94□□□□□ -0.34
HDAC6-207ENST00000430858 LMOD3Q0VAK6 560 aa12.94□□□□□ -0.34
HDAC6-207ENST00000430858 NLGN2Q8NFZ4 835 aa12.94□□□□□ -0.34
HDAC6-207ENST00000430858 RUNDC1Q96C34 613 aa12.94□□□□□ -0.34
HDAC6-207ENST00000430858 COL15A1P39059 1388 aa12.94□□□□□ -0.34
HDAC6-207ENST00000430858 TMPOP42166 694 aaKnown RBP12.93□□□□□ -0.34
HDAC6-207ENST00000430858 SRP68Q9UHB9 627 aaKnown RBP12.93□□□□□ -0.34
HDAC6-207ENST00000430858 ADAMTS8Q9UP79 889 aa12.93□□□□□ -0.34
HDAC6-207ENST00000430858 A0A087WZG4 1122 aa12.92□□□□□ -0.34
HDAC6-207ENST00000430858 IL6STP40189 918 aaPredicted RBP12.92□□□□□ -0.34
HDAC6-207ENST00000430858 EIF5P55010 431 aaKnown RBP12.92□□□□□ -0.34
HDAC6-207ENST00000430858 FKBP8Q14318 412 aa12.92□□□□□ -0.34
HDAC6-207ENST00000430858 GPR162Q16538 588 aa12.92□□□□□ -0.34
HDAC6-207ENST00000430858 USPL1Q5W0Q7 1092 aa12.92□□□□□ -0.34
HDAC6-207ENST00000430858 CCDC146Q8IYE0 955 aa12.92□□□□□ -0.34
HDAC6-207ENST00000430858 THUMPD2Q9BTF0 503 aaKnown RBP12.92□□□□□ -0.34
HDAC6-207ENST00000430858 NARFQ9UHQ1 456 aa12.92□□□□□ -0.34
HDAC6-207ENST00000430858 PARP3Q9Y6F1 533 aa12.92□□□□□ -0.34
HDAC6-207ENST00000430858 A1BGP04217 495 aa12.91□□□□□ -0.34
HDAC6-207ENST00000430858 NPM2Q86SE8 214 aaKnown RBP12.91□□□□□ -0.34
HDAC6-207ENST00000430858 MIS18AQ9NYP9 233 aa12.91□□□□□ -0.34
HDAC6-207ENST00000430858 USP16Q9Y5T5 823 aa12.91□□□□□ -0.34
HDAC6-207ENST00000430858 C4AP0C0L4 1744 aa12.91□□□□□ -0.34
HDAC6-207ENST00000430858 ANP32CO43423 234 aa12.9□□□□□ -0.34
HDAC6-207ENST00000430858 BABAM1Q9NWV8 329 aa12.9□□□□□ -0.34
HDAC6-207ENST00000430858 PRAMEF22A3QJZ6 481 aa12.89□□□□□ -0.35
HDAC6-207ENST00000430858 TM4SF1P30408 202 aa12.89□□□□□ -0.35
HDAC6-207ENST00000430858 EIF4A1P60842 406 aaKnown RBP12.89□□□□□ -0.35
HDAC6-207ENST00000430858 NEUROD2Q15784 382 aa12.89□□□□□ -0.35
HDAC6-207ENST00000430858 PELP1Q8IZL8 1130 aaKnown RBP12.89□□□□□ -0.35
HDAC6-207ENST00000430858 RRP7AQ9Y3A4 280 aaKnown RBP12.89□□□□□ -0.35
HDAC6-207ENST00000430858 ZNF330Q9Y3S2 320 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-207ENST00000430858 DLG5Q8TDM6 1919 aa12.89□□□□□ -0.35
HDAC6-207ENST00000430858 GRIN3BO60391 1043 aa12.88□□□□□ -0.35
HDAC6-207ENST00000430858 GIGYF1O75420 1035 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-207ENST00000430858 YY1P25490 414 aa12.88□□□□□ -0.35
HDAC6-207ENST00000430858 TGFB2P61812 414 aa12.88□□□□□ -0.35
HDAC6-207ENST00000430858 BCL2L12Q9HB09 334 aa12.88□□□□□ -0.35
HDAC6-207ENST00000430858 TSPYL4Q9UJ04 414 aa12.88□□□□□ -0.35
HDAC6-207ENST00000430858 C10orf71Q711Q0 1435 aa12.88□□□□□ -0.35
HDAC6-207ENST00000430858 POLRMTO00411 1230 aaKnown RBP12.87□□□□□ -0.35
HDAC6-207ENST00000430858 DDR1Q08345 913 aa12.87□□□□□ -0.35
HDAC6-207ENST00000430858 NFIXQ14938 502 aa12.87□□□□□ -0.35
HDAC6-207ENST00000430858 TBC1D2BQ9UPU7 963 aa12.87□□□□□ -0.35
HDAC6-207ENST00000430858 YBX3P16989 372 aaKnown RBP eCLIP12.86□□□□□ -0.35
HDAC6-207ENST00000430858 DZIP3Q86Y13 1208 aaKnown RBP12.86□□□□□ -0.35
HDAC6-207ENST00000430858 TRIM35Q9UPQ4 493 aa12.86□□□□□ -0.35
HDAC6-207ENST00000430858 APAF1O14727 1248 aa12.85□□□□□ -0.35
HDAC6-207ENST00000430858 CAMTA2O94983 1202 aa12.85□□□□□ -0.35
HDAC6-207ENST00000430858 PIP4K2AP48426 406 aaPredicted RBP12.85□□□□□ -0.35
HDAC6-207ENST00000430858 CCDC184Q52MB2 194 aa12.85□□□□□ -0.35
HDAC6-207ENST00000430858 KDM3BQ7LBC6 1761 aa12.84□□□□□ -0.35
HDAC6-207ENST00000430858 NBPF26B4DH59 902 aa12.84□□□□□ -0.35
HDAC6-207ENST00000430858 CHL1O00533 1208 aa12.84□□□□□ -0.35
HDAC6-207ENST00000430858 SERPINB2P05120 415 aa12.84□□□□□ -0.35
HDAC6-207ENST00000430858 NBPF10Q6P3W6 841 aaKnown RBP12.84□□□□□ -0.35
HDAC6-207ENST00000430858 NBPF15Q8N660 670 aa12.84□□□□□ -0.35
HDAC6-207ENST00000430858 MRS2Q9HD23 443 aa12.84□□□□□ -0.35
HDAC6-207ENST00000430858 PXDNLA1KZ92 1463 aa12.84□□□□□ -0.35
HDAC6-207ENST00000430858 A0A0G2JLW4 131 aa12.83□□□□□ -0.36
HDAC6-207ENST00000430858 RGL2O15211 777 aa12.83□□□□□ -0.36
HDAC6-207ENST00000430858 TBC1D9BQ66K14 1250 aa12.83□□□□□ -0.36
HDAC6-207ENST00000430858 CLEC4GQ6UXB4 293 aa12.83□□□□□ -0.36
HDAC6-207ENST00000430858 BICDL1Q6ZP65 573 aa12.83□□□□□ -0.36
HDAC6-207ENST00000430858 ZNF652Q9Y2D9 606 aa12.83□□□□□ -0.36
HDAC6-207ENST00000430858 ERBB4Q15303 1308 aa12.83□□□□□ -0.36
HDAC6-207ENST00000430858 KIF13BQ9NQT8 1826 aa12.83□□□□□ -0.36
HDAC6-207ENST00000430858 DPEP1P16444 411 aa12.82□□□□□ -0.36
HDAC6-207ENST00000430858 CALD1Q05682 793 aaKnown RBP12.82□□□□□ -0.36
HDAC6-207ENST00000430858 SETDB2Q96T68 719 aa12.82□□□□□ -0.36
HDAC6-207ENST00000430858 LAS1LQ9Y4W2 734 aaKnown RBP12.82□□□□□ -0.36
HDAC6-207ENST00000430858 CARMIL3Q8ND23 1372 aa12.81□□□□□ -0.36
HDAC6-207ENST00000430858 CFAP44Q96MT7 982 aa12.81□□□□□ -0.36
HDAC6-207ENST00000430858 WWC3Q9ULE0 1092 aa12.81□□□□□ -0.36
HDAC6-207ENST00000430858 UTRNP46939 3433 aa12.81□□□□□ -0.36
HDAC6-207ENST00000430858 SCN7AQ01118 1682 aa12.8□□□□□ -0.36
HDAC6-207ENST00000430858 LAMB4A4D0S4 1761 aa12.8□□□□□ -0.36
HDAC6-207ENST00000430858 KCNA3P22001 575 aa12.8□□□□□ -0.36
HDAC6-207ENST00000430858 PIM2Q9P1W9 311 aa12.8□□□□□ -0.36
HDAC6-207ENST00000430858 BCS1LQ9Y276 419 aa12.8□□□□□ -0.36
HDAC6-207ENST00000430858 ERVV-1B6SEH8 477 aa12.79□□□□□ -0.36
HDAC6-207ENST00000430858 ZNF853P0CG23 659 aa12.79□□□□□ -0.36
HDAC6-207ENST00000430858 MYL6BP14649 208 aa12.79□□□□□ -0.36
HDAC6-207ENST00000430858 EIF2S2P20042 333 aaKnown RBP12.79□□□□□ -0.36
HDAC6-207ENST00000430858 NGEFQ8N5V2 710 aa12.79□□□□□ -0.36
HDAC6-207ENST00000430858 IFT57Q9NWB7 429 aa12.79□□□□□ -0.36
HDAC6-207ENST00000430858 NRXN2Q9P2S2 1712 aa12.79□□□□□ -0.36
HDAC6-207ENST00000430858 NPHP1O15259 732 aa12.78□□□□□ -0.36
HDAC6-207ENST00000430858 HOXB7P09629 217 aa12.78□□□□□ -0.36
HDAC6-207ENST00000430858 CHRNA5P30532 468 aa12.78□□□□□ -0.36
HDAC6-207ENST00000430858 GNAI1P63096 354 aa12.78□□□□□ -0.36
HDAC6-207ENST00000430858 CCDC27Q2M243 656 aa12.78□□□□□ -0.36
HDAC6-207ENST00000430858 NCBP3Q53F19 620 aaKnown RBP12.78□□□□□ -0.36
HDAC6-207ENST00000430858 KIF6Q6ZMV9 814 aa12.78□□□□□ -0.36
HDAC6-207ENST00000430858 CNBD1Q8NA66 436 aa12.78□□□□□ -0.36
HDAC6-207ENST00000430858 BRIP1Q9BX63 1249 aa12.78□□□□□ -0.36
HDAC6-207ENST00000430858 MBIPQ9NS73 344 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms