RNA–Protein interactions for RNA: ENST00000429913.2

GAPDHP29-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 29, humanhuman

BASIC

Gene GAPDHP29, Length 985 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP29-201ENST00000429913 PHF14O94880 888 aa17.06■□□□□ 0.32
GAPDHP29-201ENST00000429913 ADRA2BP18089 450 aa17.06■□□□□ 0.32
GAPDHP29-201ENST00000429913 GOLGA2Q08379 1002 aa17.06■□□□□ 0.32
GAPDHP29-201ENST00000429913 CICQ96RK0 1608 aaPredicted RBP17.06■□□□□ 0.32
GAPDHP29-201ENST00000429913 HOXB7P09629 217 aa17.05■□□□□ 0.32
GAPDHP29-201ENST00000429913 TRAPPC3LQ5T215 181 aa17.05■□□□□ 0.32
GAPDHP29-201ENST00000429913 TJP1Q07157 1748 aa17.04■□□□□ 0.32
GAPDHP29-201ENST00000429913 SOS1Q07889 1333 aaPredicted RBP17.04■□□□□ 0.32
GAPDHP29-201ENST00000429913 A0A087WZG4 1122 aa17.04■□□□□ 0.32
GAPDHP29-201ENST00000429913 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.04■□□□□ 0.32
GAPDHP29-201ENST00000429913 E9PSI1 815 aa17.04■□□□□ 0.32
GAPDHP29-201ENST00000429913 CANXP27824 592 aaKnown RBP17.04■□□□□ 0.32
GAPDHP29-201ENST00000429913 USP16Q9Y5T5 823 aa17.04■□□□□ 0.32
GAPDHP29-201ENST00000429913 TAF1LQ8IZX4 1826 aa17.03■□□□□ 0.32
GAPDHP29-201ENST00000429913 PNPLA7Q6ZV29 1317 aa17.03■□□□□ 0.32
GAPDHP29-201ENST00000429913 EIF2S2P20042 333 aaKnown RBP17.03■□□□□ 0.32
GAPDHP29-201ENST00000429913 RFC4P35249 363 aa17.03■□□□□ 0.32
GAPDHP29-201ENST00000429913 INTS5Q6P9B9 1019 aaKnown RBP17.03■□□□□ 0.32
GAPDHP29-201ENST00000429913 SLC16A10Q8TF71 515 aa17.03■□□□□ 0.32
GAPDHP29-201ENST00000429913 TSR2Q969E8 191 aaKnown RBP17.03■□□□□ 0.32
GAPDHP29-201ENST00000429913 ZBTB1Q9Y2K1 713 aa17.03■□□□□ 0.32
GAPDHP29-201ENST00000429913 ZNF330Q9Y3S2 320 aaPredicted RBP17.03■□□□□ 0.32
GAPDHP29-201ENST00000429913 ERBB4Q15303 1308 aa17.02■□□□□ 0.32
GAPDHP29-201ENST00000429913 FANCIQ9NVI1 1328 aa17.02■□□□□ 0.32
GAPDHP29-201ENST00000429913 PRAMEF22A3QJZ6 481 aa17.02■□□□□ 0.32
GAPDHP29-201ENST00000429913 IL6STP40189 918 aaPredicted RBP17.02■□□□□ 0.32
GAPDHP29-201ENST00000429913 DUSP27Q5VZP5 1158 aa17.02■□□□□ 0.32
GAPDHP29-201ENST00000429913 COL5A3P25940 1745 aaPredicted RBP17.01■□□□□ 0.31
GAPDHP29-201ENST00000429913 ZNF521Q96K83 1311 aa17.01■□□□□ 0.31
GAPDHP29-201ENST00000429913 A1BGP04217 495 aa17.01■□□□□ 0.31
GAPDHP29-201ENST00000429913 HDGFL1Q5TGJ6 251 aa17.01■□□□□ 0.31
GAPDHP29-201ENST00000429913 COL23A1Q86Y22 540 aaPredicted RBP17.01■□□□□ 0.31
GAPDHP29-201ENST00000429913 ARXQ96QS3 562 aa17.01■□□□□ 0.31
GAPDHP29-201ENST00000429913 ZPR1O75312 459 aa17■□□□□ 0.31
GAPDHP29-201ENST00000429913 COL15A1P39059 1388 aa17■□□□□ 0.31
GAPDHP29-201ENST00000429913 ELL2O00472 640 aaPredicted RBP16.99■□□□□ 0.31
GAPDHP29-201ENST00000429913 ARHGEF1Q92888 912 aaKnown RBP16.99■□□□□ 0.31
GAPDHP29-201ENST00000429913 MTFR1LQ9H019 292 aa16.99■□□□□ 0.31
GAPDHP29-201ENST00000429913 LAMB4A4D0S4 1761 aa16.98■□□□□ 0.31
GAPDHP29-201ENST00000429913 KRT24Q2M2I5 525 aa16.98■□□□□ 0.31
GAPDHP29-201ENST00000429913 TWISTNBQ3B726 338 aaPredicted RBP16.98■□□□□ 0.31
GAPDHP29-201ENST00000429913 CCDC30Q5VVM6 783 aa16.98■□□□□ 0.31
GAPDHP29-201ENST00000429913 NECTIN2Q92692 538 aa16.98■□□□□ 0.31
GAPDHP29-201ENST00000429913 SPON1Q9HCB6 807 aa16.98■□□□□ 0.31
GAPDHP29-201ENST00000429913 QSER1Q2KHR3 1735 aa16.98■□□□□ 0.31
GAPDHP29-201ENST00000429913 ZBTB7AO95365 584 aa16.97■□□□□ 0.31
GAPDHP29-201ENST00000429913 POLD1P28340 1107 aa16.97■□□□□ 0.31
GAPDHP29-201ENST00000429913 EIF5P55010 431 aaKnown RBP16.97■□□□□ 0.31
GAPDHP29-201ENST00000429913 EXOSC9Q06265 439 aaKnown RBP16.97■□□□□ 0.31
GAPDHP29-201ENST00000429913 SLFN5Q08AF3 891 aa16.97■□□□□ 0.31
GAPDHP29-201ENST00000429913 C8orf58Q8NAV2 365 aa16.97■□□□□ 0.31
GAPDHP29-201ENST00000429913 STK31Q9BXU1 1019 aa16.97■□□□□ 0.31
GAPDHP29-201ENST00000429913 ZBED9Q6R2W3 1325 aa16.96■□□□□ 0.31
GAPDHP29-201ENST00000429913 MYL6BP14649 208 aa16.96■□□□□ 0.31
GAPDHP29-201ENST00000429913 KIF6Q6ZMV9 814 aa16.96■□□□□ 0.31
GAPDHP29-201ENST00000429913 DBF4Q9UBU7 674 aaPredicted RBP16.96■□□□□ 0.31
GAPDHP29-201ENST00000429913 PIP4K2AP48426 406 aaPredicted RBP16.95■□□□□ 0.3
GAPDHP29-201ENST00000429913 SMIM5Q71RC9 77 aa16.95■□□□□ 0.3
GAPDHP29-201ENST00000429913 AMIGO3Q86WK7 504 aa16.95■□□□□ 0.3
GAPDHP29-201ENST00000429913 DZIP3Q86Y13 1208 aaKnown RBP16.95■□□□□ 0.3
GAPDHP29-201ENST00000429913 NLGN1Q8N2Q7 840 aa16.95■□□□□ 0.3
GAPDHP29-201ENST00000429913 SPINK5Q9NQ38 1064 aaPredicted RBP16.95■□□□□ 0.3
GAPDHP29-201ENST00000429913 DDX21Q9NR30 783 aaKnown RBP eCLIP16.95■□□□□ 0.3
GAPDHP29-201ENST00000429913 NARFQ9UHQ1 456 aa16.95■□□□□ 0.3
GAPDHP29-201ENST00000429913 UBR3Q6ZT12 1888 aa16.95■□□□□ 0.3
GAPDHP29-201ENST00000429913 NBPF26B4DH59 902 aa16.94■□□□□ 0.3
GAPDHP29-201ENST00000429913 NBPF10Q6P3W6 841 aaKnown RBP16.94■□□□□ 0.3
GAPDHP29-201ENST00000429913 NBPF15Q8N660 670 aa16.94■□□□□ 0.3
GAPDHP29-201ENST00000429913 HYPKQ9NX55 129 aa16.94■□□□□ 0.3
GAPDHP29-201ENST00000429913 ATF5Q9Y2D1 282 aaPredicted RBP16.94■□□□□ 0.3
GAPDHP29-201ENST00000429913 ZNF652Q9Y2D9 606 aa16.94■□□□□ 0.3
GAPDHP29-201ENST00000429913 USP42Q9H9J4 1324 aaKnown RBP16.94■□□□□ 0.3
GAPDHP29-201ENST00000429913 USPL1Q5W0Q7 1092 aa16.93■□□□□ 0.3
GAPDHP29-201ENST00000429913 CDCA7LQ96GN5 454 aa16.93■□□□□ 0.3
GAPDHP29-201ENST00000429913 PDGFDQ9GZP0 370 aaPredicted RBP16.93■□□□□ 0.3
GAPDHP29-201ENST00000429913 CHPF2Q9P2E5 772 aa16.93■□□□□ 0.3
GAPDHP29-201ENST00000429913 TBC1D2BQ9UPU7 963 aa16.93■□□□□ 0.3
GAPDHP29-201ENST00000429913 CASZ1Q86V15 1759 aa16.92■□□□□ 0.3
GAPDHP29-201ENST00000429913 TUBGCP6Q96RT7 1819 aa16.92■□□□□ 0.3
GAPDHP29-201ENST00000429913 MSL1Q68DK7 614 aa16.92■□□□□ 0.3
GAPDHP29-201ENST00000429913 TSPYL6Q8N831 410 aa16.92■□□□□ 0.3
GAPDHP29-201ENST00000429913 PPP1R1BQ9UD71 204 aaPredicted RBP16.92■□□□□ 0.3
GAPDHP29-201ENST00000429913 SRP68Q9UHB9 627 aaKnown RBP16.91■□□□□ 0.3
GAPDHP29-201ENST00000429913 MYH14Q7Z406 1995 aaKnown RBP16.91■□□□□ 0.3
GAPDHP29-201ENST00000429913 RGL2O15211 777 aa16.9■□□□□ 0.3
GAPDHP29-201ENST00000429913 VAMP4O75379 141 aa16.9■□□□□ 0.3
GAPDHP29-201ENST00000429913 CT47B1P0C2W7 299 aaPredicted RBP16.9■□□□□ 0.3
GAPDHP29-201ENST00000429913 GYS1P13807 737 aa16.9■□□□□ 0.3
GAPDHP29-201ENST00000429913 ZNF428Q96B54 188 aa16.9■□□□□ 0.3
GAPDHP29-201ENST00000429913 DDX58O95786 925 aaKnown RBP16.89■□□□□ 0.29
GAPDHP29-201ENST00000429913 ANXA1P04083 346 aa16.89■□□□□ 0.29
GAPDHP29-201ENST00000429913 AIMP1Q12904 312 aaKnown RBP16.89■□□□□ 0.29
GAPDHP29-201ENST00000429913 PDIA6Q15084 440 aa16.89■□□□□ 0.29
GAPDHP29-201ENST00000429913 TRMT2AQ8IZ69 625 aaKnown RBP16.89■□□□□ 0.29
GAPDHP29-201ENST00000429913 PARP3Q9Y6F1 533 aa16.89■□□□□ 0.29
GAPDHP29-201ENST00000429913 ERVV-1B6SEH8 477 aa16.88■□□□□ 0.29
GAPDHP29-201ENST00000429913 PROSER3Q2NL68 480 aa16.88■□□□□ 0.29
GAPDHP29-201ENST00000429913 CLEC4GQ6UXB4 293 aa16.88■□□□□ 0.29
GAPDHP29-201ENST00000429913 COPS6Q7L5N1 327 aa16.88■□□□□ 0.29
GAPDHP29-201ENST00000429913 XAGE3Q8WTP9 111 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms