RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 TRIM5Q9C035 493 aa13.22□□□□□ -0.29
SEMA4D-209ENST00000429836 ZNF215Q9UL58 517 aaPredicted RBP13.22□□□□□ -0.29
SEMA4D-209ENST00000429836 FANCAO15360 1455 aa13.22□□□□□ -0.29
SEMA4D-209ENST00000429836 NPHP1O15259 732 aa13.22□□□□□ -0.29
SEMA4D-209ENST00000429836 TYRO3Q06418 890 aa13.22□□□□□ -0.29
SEMA4D-209ENST00000429836 HDGFL2Q7Z4V5 671 aaPredicted RBP13.22□□□□□ -0.29
SEMA4D-209ENST00000429836 CACTINQ8WUQ7 758 aaKnown RBP13.22□□□□□ -0.29
SEMA4D-209ENST00000429836 ANKRD26Q9UPS8 1709 aa13.22□□□□□ -0.29
SEMA4D-209ENST00000429836 SALL3Q9BXA9 1300 aa13.22□□□□□ -0.29
SEMA4D-209ENST00000429836 VPS37CA5D8V6 355 aaPredicted RBP13.22□□□□□ -0.29
SEMA4D-209ENST00000429836 USP27XA6NNY8 438 aa13.22□□□□□ -0.29
SEMA4D-209ENST00000429836 CAPN2P17655 700 aa13.22□□□□□ -0.29
SEMA4D-209ENST00000429836 LIG1P18858 919 aa13.22□□□□□ -0.29
SEMA4D-209ENST00000429836 CBX8Q9HC52 389 aa13.22□□□□□ -0.29
SEMA4D-209ENST00000429836 HSPA4P34932 840 aa13.21□□□□□ -0.29
SEMA4D-209ENST00000429836 CCDC144BQ3MJ40 725 aa13.21□□□□□ -0.29
SEMA4D-209ENST00000429836 ANO6Q4KMQ2 910 aa13.21□□□□□ -0.29
SEMA4D-209ENST00000429836 CEP135Q66GS9 1140 aa13.21□□□□□ -0.29
SEMA4D-209ENST00000429836 FAM173BQ6P4H8 233 aa13.21□□□□□ -0.29
SEMA4D-209ENST00000429836 FBXO38Q6PIJ6 1188 aa13.21□□□□□ -0.29
SEMA4D-209ENST00000429836 CCDC83Q8IWF9 413 aa13.21□□□□□ -0.29
SEMA4D-209ENST00000429836 CCDC144CPQ8IYA2 1237 aa13.21□□□□□ -0.29
SEMA4D-209ENST00000429836 PAXBP1Q9Y5B6 917 aa13.21□□□□□ -0.29
SEMA4D-209ENST00000429836 CDC42BPGQ6DT37 1551 aa13.21□□□□□ -0.3
SEMA4D-209ENST00000429836 SLC4A2P04920 1241 aa13.21□□□□□ -0.3
SEMA4D-209ENST00000429836 ARID5BQ14865 1188 aa13.21□□□□□ -0.3
SEMA4D-209ENST00000429836 RASEFQ8IZ41 740 aa13.21□□□□□ -0.3
SEMA4D-209ENST00000429836 ZNF397Q8NF99 534 aaPredicted RBP13.21□□□□□ -0.3
SEMA4D-209ENST00000429836 LRRCC1Q9C099 1032 aa13.21□□□□□ -0.3
SEMA4D-209ENST00000429836 ABCC3O15438 1527 aa13.2□□□□□ -0.3
SEMA4D-209ENST00000429836 DLG5Q8TDM6 1919 aa13.2□□□□□ -0.3
SEMA4D-209ENST00000429836 GJB2P29033 226 aa13.2□□□□□ -0.3
SEMA4D-209ENST00000429836 IL13P35225 146 aa13.2□□□□□ -0.3
SEMA4D-209ENST00000429836 ZNF75DP51815 510 aa13.2□□□□□ -0.3
SEMA4D-209ENST00000429836 ELF2Q15723 593 aa13.2□□□□□ -0.3
SEMA4D-209ENST00000429836 G2E3Q7L622 706 aa13.2□□□□□ -0.3
SEMA4D-209ENST00000429836 PRAM1Q96QH2 718 aa13.2□□□□□ -0.3
SEMA4D-209ENST00000429836 MTMR6Q9Y217 621 aa13.2□□□□□ -0.3
SEMA4D-209ENST00000429836 SNX14Q9Y5W7 946 aa13.2□□□□□ -0.3
SEMA4D-209ENST00000429836 ZFYVE9O95405 1425 aa13.2□□□□□ -0.3
SEMA4D-209ENST00000429836 RBM6P78332 1123 aaKnown RBP13.2□□□□□ -0.3
SEMA4D-209ENST00000429836 MAP3K11Q16584 847 aa13.2□□□□□ -0.3
SEMA4D-209ENST00000429836 ATP6V1DQ9Y5K8 247 aa13.2□□□□□ -0.3
SEMA4D-209ENST00000429836 FERMT3Q86UX7 667 aa13.19□□□□□ -0.3
SEMA4D-209ENST00000429836 TTC14Q96N46 770 aa13.19□□□□□ -0.3
SEMA4D-209ENST00000429836 CHMP4AQ9BY43 222 aa13.19□□□□□ -0.3
SEMA4D-209ENST00000429836 NUP62CLQ9H1M0 184 aa13.19□□□□□ -0.3
SEMA4D-209ENST00000429836 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.19□□□□□ -0.3
SEMA4D-209ENST00000429836 PNMA6EA0A0J9YXQ4 647 aa13.19□□□□□ -0.3
SEMA4D-209ENST00000429836 LMOD3Q0VAK6 560 aa13.19□□□□□ -0.3
SEMA4D-209ENST00000429836 TTC6Q86TZ1 520 aa13.19□□□□□ -0.3
SEMA4D-209ENST00000429836 DDX54Q8TDD1 881 aaKnown RBP13.19□□□□□ -0.3
SEMA4D-209ENST00000429836 ZRANB1Q9UGI0 708 aa13.19□□□□□ -0.3
SEMA4D-209ENST00000429836 LIMCH1Q9UPQ0 1083 aa13.19□□□□□ -0.3
SEMA4D-209ENST00000429836 MCM10Q7L590 875 aa13.18□□□□□ -0.3
SEMA4D-209ENST00000429836 IL1RAPL2Q9NP60 686 aa13.18□□□□□ -0.3
SEMA4D-209ENST00000429836 MIS18AQ9NYP9 233 aa13.18□□□□□ -0.3
SEMA4D-209ENST00000429836 CLIP2Q9UDT6 1046 aa13.18□□□□□ -0.3
SEMA4D-209ENST00000429836 KIAA0232Q92628 1395 aa13.18□□□□□ -0.3
SEMA4D-209ENST00000429836 NPATQ14207 1427 aa13.18□□□□□ -0.3
SEMA4D-209ENST00000429836 SSH2Q76I76 1423 aa13.18□□□□□ -0.3
SEMA4D-209ENST00000429836 PLA2G4DQ86XP0 818 aa13.18□□□□□ -0.3
SEMA4D-209ENST00000429836 NUTM1Q86Y26 1132 aa13.18□□□□□ -0.3
SEMA4D-209ENST00000429836 TRMT1Q9NXH9 659 aaKnown RBP13.18□□□□□ -0.3
SEMA4D-209ENST00000429836 KIF13AQ9H1H9 1805 aa13.17□□□□□ -0.3
SEMA4D-209ENST00000429836 RAD50Q92878 1312 aa13.17□□□□□ -0.3
SEMA4D-209ENST00000429836 TSPOAP1O95153 1857 aa13.17□□□□□ -0.3
SEMA4D-209ENST00000429836 IL17RAQ96F46 866 aa13.17□□□□□ -0.3
SEMA4D-209ENST00000429836 ZNF446Q9NWS9 450 aa13.17□□□□□ -0.3
SEMA4D-209ENST00000429836 MAP2P11137 1827 aaKnown RBP13.17□□□□□ -0.3
SEMA4D-209ENST00000429836 RAPGEF3O95398 923 aa13.17□□□□□ -0.3
SEMA4D-209ENST00000429836 RRS1Q15050 365 aaKnown RBP13.17□□□□□ -0.3
SEMA4D-209ENST00000429836 GTF3C6Q969F1 213 aa13.17□□□□□ -0.3
SEMA4D-209ENST00000429836 CDK19Q9BWU1 502 aa13.17□□□□□ -0.3
SEMA4D-209ENST00000429836 TNMDQ9H2S6 317 aa13.17□□□□□ -0.3
SEMA4D-209ENST00000429836 DACT1Q9NYF0 836 aa13.17□□□□□ -0.3
SEMA4D-209ENST00000429836 ARAP3Q8WWN8 1544 aa13.17□□□□□ -0.3
SEMA4D-209ENST00000429836 TUBGCP6Q96RT7 1819 aa13.16□□□□□ -0.3
SEMA4D-209ENST00000429836 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.16□□□□□ -0.3
SEMA4D-209ENST00000429836 VGFO15240 615 aaPredicted RBP13.16□□□□□ -0.3
SEMA4D-209ENST00000429836 GNAI2P04899 355 aa13.16□□□□□ -0.3
SEMA4D-209ENST00000429836 CASTP20810 708 aaKnown RBP13.16□□□□□ -0.3
SEMA4D-209ENST00000429836 NECAB1Q8N987 351 aa13.16□□□□□ -0.3
SEMA4D-209ENST00000429836 TRIM34Q9BYJ4 488 aa13.16□□□□□ -0.3
SEMA4D-209ENST00000429836 DNAJC25Q9H1X3 360 aa13.16□□□□□ -0.3
SEMA4D-209ENST00000429836 CALCOCO1Q9P1Z2 691 aa13.16□□□□□ -0.3
SEMA4D-209ENST00000429836 PTPRCP08575 1304 aa13.16□□□□□ -0.3
SEMA4D-209ENST00000429836 RPGRIP1LQ68CZ1 1315 aa13.16□□□□□ -0.3
SEMA4D-209ENST00000429836 AEBP1Q8IUX7 1158 aa13.16□□□□□ -0.3
SEMA4D-209ENST00000429836 DNAJC2Q99543 621 aaKnown RBP13.16□□□□□ -0.3
SEMA4D-209ENST00000429836 FAM53CQ9NYF3 392 aa13.16□□□□□ -0.3
SEMA4D-209ENST00000429836 SPG7Q9UQ90 795 aa13.16□□□□□ -0.3
SEMA4D-209ENST00000429836 ERBB3P21860 1342 aa13.16□□□□□ -0.3
SEMA4D-209ENST00000429836 YTHDC2Q9H6S0 1430 aaKnown RBP13.15□□□□□ -0.3
SEMA4D-209ENST00000429836 TULP2O00295 520 aa13.15□□□□□ -0.3
SEMA4D-209ENST00000429836 PTPN14Q15678 1187 aa13.15□□□□□ -0.3
SEMA4D-209ENST00000429836 TFIP11Q9UBB9 837 aaKnown RBP13.15□□□□□ -0.3
SEMA4D-209ENST00000429836 KIF20BQ96Q89 1820 aa13.15□□□□□ -0.3
SEMA4D-209ENST00000429836 HNRNPH2P55795 449 aaKnown RBP13.14□□□□□ -0.31
SEMA4D-209ENST00000429836 CERS3Q8IU89 383 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms