RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 C10orf71Q711Q0 1435 aa12.26□□□□□ -0.45
NEDD1-203ENST00000429527 CABP4P57796 275 aa12.26□□□□□ -0.45
NEDD1-203ENST00000429527 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.26□□□□□ -0.45
NEDD1-203ENST00000429527 GNAT3A8MTJ3 354 aa12.26□□□□□ -0.45
NEDD1-203ENST00000429527 MPRIPQ6WCQ1 1025 aa12.26□□□□□ -0.45
NEDD1-203ENST00000429527 COL23A1Q86Y22 540 aaPredicted RBP12.26□□□□□ -0.45
NEDD1-203ENST00000429527 AFDNP55196 1824 aaKnown RBP12.25□□□□□ -0.45
NEDD1-203ENST00000429527 KAT6BQ8WYB5 2073 aa12.25□□□□□ -0.45
NEDD1-203ENST00000429527 E9PSI1 815 aa12.25□□□□□ -0.45
NEDD1-203ENST00000429527 RPS6KA4O75676 772 aa12.25□□□□□ -0.45
NEDD1-203ENST00000429527 IL17REQ8NFR9 667 aa12.23□□□□□ -0.45
NEDD1-203ENST00000429527 SOS1Q07889 1333 aaPredicted RBP12.23□□□□□ -0.45
NEDD1-203ENST00000429527 PDGFDQ9GZP0 370 aaPredicted RBP12.23□□□□□ -0.45
NEDD1-203ENST00000429527 CD2APQ9Y5K6 639 aa12.22□□□□□ -0.45
NEDD1-203ENST00000429527 INTS5Q6P9B9 1019 aaKnown RBP12.22□□□□□ -0.45
NEDD1-203ENST00000429527 SYTL4Q96C24 671 aaPredicted RBP12.22□□□□□ -0.45
NEDD1-203ENST00000429527 TEX13AQ9BXU3 409 aaPredicted RBP12.22□□□□□ -0.45
NEDD1-203ENST00000429527 RTL5Q5HYW3 569 aaPredicted RBP12.21□□□□□ -0.45
NEDD1-203ENST00000429527 LGR6Q9HBX8 967 aa12.21□□□□□ -0.45
NEDD1-203ENST00000429527 ANKRD36CQ5JPF3 1778 aa12.21□□□□□ -0.45
NEDD1-203ENST00000429527 HMOX1P09601 288 aa12.21□□□□□ -0.45
NEDD1-203ENST00000429527 PRKAR2BP31323 418 aa12.21□□□□□ -0.45
NEDD1-203ENST00000429527 C20orf194Q5TEA3 1177 aa12.21□□□□□ -0.45
NEDD1-203ENST00000429527 NFATC2IPQ8NCF5 419 aa12.21□□□□□ -0.45
NEDD1-203ENST00000429527 PHACTR3Q96KR7 559 aa12.21□□□□□ -0.45
NEDD1-203ENST00000429527 TFCP2L1Q9NZI6 479 aa12.21□□□□□ -0.45
NEDD1-203ENST00000429527 MAPK8IP3Q9UPT6 1336 aa12.21□□□□□ -0.46
NEDD1-203ENST00000429527 CYP19A1P11511 503 aaPredicted RBP12.21□□□□□ -0.46
NEDD1-203ENST00000429527 ATP6V1AP38606 617 aa12.21□□□□□ -0.46
NEDD1-203ENST00000429527 AK7Q96M32 723 aa12.21□□□□□ -0.46
NEDD1-203ENST00000429527 ARXQ96QS3 562 aa12.21□□□□□ -0.46
NEDD1-203ENST00000429527 RIC1Q4ADV7 1423 aa12.2□□□□□ -0.46
NEDD1-203ENST00000429527 AMIGO3Q86WK7 504 aa12.2□□□□□ -0.46
NEDD1-203ENST00000429527 CT47B1P0C2W7 299 aaPredicted RBP12.19□□□□□ -0.46
NEDD1-203ENST00000429527 NFE2L2Q16236 605 aa12.19□□□□□ -0.46
NEDD1-203ENST00000429527 ANKRD31Q8N7Z5 1873 aa12.19□□□□□ -0.46
NEDD1-203ENST00000429527 POLD1P28340 1107 aa12.19□□□□□ -0.46
NEDD1-203ENST00000429527 USP42Q9H9J4 1324 aaKnown RBP12.19□□□□□ -0.46
NEDD1-203ENST00000429527 WDR63Q8IWG1 891 aa12.18□□□□□ -0.46
NEDD1-203ENST00000429527 ZNF790Q6PG37 636 aa12.18□□□□□ -0.46
NEDD1-203ENST00000429527 PXDNLA1KZ92 1463 aa12.17□□□□□ -0.46
NEDD1-203ENST00000429527 ZBTB7AO95365 584 aa12.17□□□□□ -0.46
NEDD1-203ENST00000429527 WDR43Q15061 677 aaKnown RBP eCLIP12.17□□□□□ -0.46
NEDD1-203ENST00000429527 CCDC87Q9NVE4 849 aa12.17□□□□□ -0.46
NEDD1-203ENST00000429527 ERBB4Q15303 1308 aa12.17□□□□□ -0.46
NEDD1-203ENST00000429527 IBTKQ9P2D0 1353 aaPredicted RBP12.17□□□□□ -0.46
NEDD1-203ENST00000429527 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.17□□□□□ -0.46
NEDD1-203ENST00000429527 CRKLP46109 303 aaKnown RBP12.17□□□□□ -0.46
NEDD1-203ENST00000429527 SYT17Q9BSW7 474 aa12.17□□□□□ -0.46
NEDD1-203ENST00000429527 RTCBQ9Y3I0 505 aaKnown RBP12.17□□□□□ -0.46
NEDD1-203ENST00000429527 LAMB2P55268 1798 aa12.17□□□□□ -0.46
NEDD1-203ENST00000429527 A0A087WZG4 1122 aa12.16□□□□□ -0.46
NEDD1-203ENST00000429527 U2SURPO15042 1029 aaKnown RBP12.16□□□□□ -0.46
NEDD1-203ENST00000429527 NLGN1Q8N2Q7 840 aa12.16□□□□□ -0.46
NEDD1-203ENST00000429527 COL15A1P39059 1388 aa12.16□□□□□ -0.46
NEDD1-203ENST00000429527 N4BP2Q86UW6 1770 aaPredicted RBP12.16□□□□□ -0.46
NEDD1-203ENST00000429527 TM4SF1P30408 202 aa12.16□□□□□ -0.46
NEDD1-203ENST00000429527 PLIN1O60240 522 aa12.15□□□□□ -0.46
NEDD1-203ENST00000429527 U2AF1L5P0DN76 240 aaPredicted RBP12.15□□□□□ -0.46
NEDD1-203ENST00000429527 EIF5P55010 431 aaKnown RBP12.15□□□□□ -0.46
NEDD1-203ENST00000429527 U2AF1Q01081 240 aaKnown RBP eCLIP12.15□□□□□ -0.46
NEDD1-203ENST00000429527 COL11A2P13942 1736 aaPredicted RBP12.15□□□□□ -0.46
NEDD1-203ENST00000429527 GYS1P13807 737 aa12.15□□□□□ -0.46
NEDD1-203ENST00000429527 TRAPPC3LQ5T215 181 aa12.15□□□□□ -0.46
NEDD1-203ENST00000429527 FMNL2Q96PY5 1086 aa12.15□□□□□ -0.46
NEDD1-203ENST00000429527 IL6STP40189 918 aaPredicted RBP12.15□□□□□ -0.47
NEDD1-203ENST00000429527 ARHGEF1Q92888 912 aaKnown RBP12.15□□□□□ -0.47
NEDD1-203ENST00000429527 FHDC1Q9C0D6 1143 aaPredicted RBP12.15□□□□□ -0.47
NEDD1-203ENST00000429527 NARFQ9UHQ1 456 aa12.15□□□□□ -0.47
NEDD1-203ENST00000429527 NUP98P52948 1817 aa12.14□□□□□ -0.47
NEDD1-203ENST00000429527 GNPATO15228 680 aa12.14□□□□□ -0.47
NEDD1-203ENST00000429527 LMOD3Q0VAK6 560 aa12.14□□□□□ -0.47
NEDD1-203ENST00000429527 NBR1Q14596 966 aa12.14□□□□□ -0.47
NEDD1-203ENST00000429527 GSE1Q14687 1217 aa12.14□□□□□ -0.47
NEDD1-203ENST00000429527 TAF7Q15545 349 aaPredicted RBP12.14□□□□□ -0.47
NEDD1-203ENST00000429527 NFKBIBQ15653 356 aa12.14□□□□□ -0.47
NEDD1-203ENST00000429527 SPINK5Q9NQ38 1064 aaPredicted RBP12.14□□□□□ -0.47
NEDD1-203ENST00000429527 ADCY9O60503 1353 aa12.13□□□□□ -0.47
NEDD1-203ENST00000429527 NEFMP07197 916 aa12.13□□□□□ -0.47
NEDD1-203ENST00000429527 KCNQ4P56696 695 aa12.13□□□□□ -0.47
NEDD1-203ENST00000429527 TGFB2P61812 414 aa12.13□□□□□ -0.47
NEDD1-203ENST00000429527 ATF5Q9Y2D1 282 aaPredicted RBP12.13□□□□□ -0.47
NEDD1-203ENST00000429527 WWC1Q8IX03 1113 aa12.13□□□□□ -0.47
NEDD1-203ENST00000429527 TEFQ10587 303 aa12.12□□□□□ -0.47
NEDD1-203ENST00000429527 DNAJC10Q8IXB1 793 aa12.12□□□□□ -0.47
NEDD1-203ENST00000429527 RUNDC1Q96C34 613 aa12.12□□□□□ -0.47
NEDD1-203ENST00000429527 ANTXR1Q9H6X2 564 aa12.12□□□□□ -0.47
NEDD1-203ENST00000429527 PPP1R1BQ9UD71 204 aaPredicted RBP12.12□□□□□ -0.47
NEDD1-203ENST00000429527 PDZRN3Q9UPQ7 1066 aa12.12□□□□□ -0.47
NEDD1-203ENST00000429527 ATP10DQ9P241 1426 aa12.12□□□□□ -0.47
NEDD1-203ENST00000429527 IL16Q14005 1332 aa12.12□□□□□ -0.47
NEDD1-203ENST00000429527 STARD3NLO95772 234 aa12.12□□□□□ -0.47
NEDD1-203ENST00000429527 ZNF496Q96IT1 587 aaPredicted RBP12.12□□□□□ -0.47
NEDD1-203ENST00000429527 HOXB7P09629 217 aa12.11□□□□□ -0.47
NEDD1-203ENST00000429527 BRPF1P55201 1214 aaPredicted RBP12.11□□□□□ -0.47
NEDD1-203ENST00000429527 CLUAP1Q96AJ1 413 aa12.11□□□□□ -0.47
NEDD1-203ENST00000429527 RBM42Q9BTD8 480 aaKnown RBP12.11□□□□□ -0.47
NEDD1-203ENST00000429527 BCL2L12Q9HB09 334 aa12.11□□□□□ -0.47
NEDD1-203ENST00000429527 DICER1Q9UPY3 1922 aaKnown RBP12.11□□□□□ -0.47
NEDD1-203ENST00000429527 BTBD11A6QL63 1104 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms