RNA–Protein interactions for RNA: ENST00000429205.6

SENP3-202, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SENP3, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-202ENST00000429205 PLCD3Q8N3E9 789 aa16.65■□□□□ 0.26
SENP3-202ENST00000429205 G2E3Q7L622 706 aa16.64■□□□□ 0.25
SENP3-202ENST00000429205 CEP120Q8N960 986 aa16.64■□□□□ 0.25
SENP3-202ENST00000429205 KCNQ3O43525 872 aa16.64■□□□□ 0.25
SENP3-202ENST00000429205 NECTIN2Q92692 538 aa16.64■□□□□ 0.25
SENP3-202ENST00000429205 PLCD4Q9BRC7 762 aa16.64■□□□□ 0.25
SENP3-202ENST00000429205 HDAC5Q9UQL6 1122 aa16.64■□□□□ 0.25
SENP3-202ENST00000429205 PTPRCP08575 1304 aa16.63■□□□□ 0.25
SENP3-202ENST00000429205 VIRMAQ69YN4 1812 aaKnown RBP16.63■□□□□ 0.25
SENP3-202ENST00000429205 BTBD11A6QL63 1104 aa16.63■□□□□ 0.25
SENP3-202ENST00000429205 PSEN1P49768 467 aa16.63■□□□□ 0.25
SENP3-202ENST00000429205 EIF4A1P60842 406 aaKnown RBP16.62■□□□□ 0.25
SENP3-202ENST00000429205 CCDC30Q5VVM6 783 aa16.62■□□□□ 0.25
SENP3-202ENST00000429205 STK31Q9BXU1 1019 aa16.62■□□□□ 0.25
SENP3-202ENST00000429205 WDR17Q8IZU2 1322 aa16.62■□□□□ 0.25
SENP3-202ENST00000429205 HDAC1Q13547 482 aaPredicted RBP16.62■□□□□ 0.25
SENP3-202ENST00000429205 TMEM132AQ24JP5 1023 aa16.62■□□□□ 0.25
SENP3-202ENST00000429205 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.62■□□□□ 0.25
SENP3-202ENST00000429205 SPG7Q9UQ90 795 aa16.62■□□□□ 0.25
SENP3-202ENST00000429205 SOS1Q07889 1333 aaPredicted RBP16.61■□□□□ 0.25
SENP3-202ENST00000429205 SLC4A3P48751 1232 aa16.61■□□□□ 0.25
SENP3-202ENST00000429205 INTS3Q68E01 1043 aaKnown RBP16.61■□□□□ 0.25
SENP3-202ENST00000429205 OVOS2A0A0G2JMS6 1433 aa16.61■□□□□ 0.25
SENP3-202ENST00000429205 PHKG2P15735 406 aa16.61■□□□□ 0.25
SENP3-202ENST00000429205 C1orf115Q9H7X2 142 aa16.61■□□□□ 0.25
SENP3-202ENST00000429205 TOM1L2Q6ZVM7 507 aa16.6■□□□□ 0.25
SENP3-202ENST00000429205 COL5A2P05997 1499 aaPredicted RBP16.6■□□□□ 0.25
SENP3-202ENST00000429205 SETQ01105 290 aaPredicted RBP16.6■□□□□ 0.25
SENP3-202ENST00000429205 HDGFL1Q5TGJ6 251 aa16.6■□□□□ 0.25
SENP3-202ENST00000429205 STRN4Q9NRL3 753 aa16.6■□□□□ 0.25
SENP3-202ENST00000429205 PDZRN3Q9UPQ7 1066 aa16.59■□□□□ 0.25
SENP3-202ENST00000429205 F6X3S4 739 aa16.58■□□□□ 0.25
SENP3-202ENST00000429205 CYP27B1O15528 508 aa16.58■□□□□ 0.25
SENP3-202ENST00000429205 IFNL2Q8IZJ0 200 aa16.58■□□□□ 0.25
SENP3-202ENST00000429205 KDM6AO15550 1401 aaPredicted RBP16.58■□□□□ 0.24
SENP3-202ENST00000429205 KDM3BQ7LBC6 1761 aa16.58■□□□□ 0.24
SENP3-202ENST00000429205 FLIIQ13045 1269 aa16.58■□□□□ 0.24
SENP3-202ENST00000429205 ZHX1Q9UKY1 873 aaPredicted RBP16.58■□□□□ 0.24
SENP3-202ENST00000429205 AHDC1Q5TGY3 1603 aaPredicted RBP16.57■□□□□ 0.24
SENP3-202ENST00000429205 EIF2S2P20042 333 aaKnown RBP16.57■□□□□ 0.24
SENP3-202ENST00000429205 PLEKHG2Q9H7P9 1386 aa16.57■□□□□ 0.24
SENP3-202ENST00000429205 HOXB7P09629 217 aa16.57■□□□□ 0.24
SENP3-202ENST00000429205 LARP1Q6PKG0 1096 aaKnown RBP16.57■□□□□ 0.24
SENP3-202ENST00000429205 FKBP5Q13451 457 aaPredicted RBP16.56■□□□□ 0.24
SENP3-202ENST00000429205 SLC4A10Q6U841 1118 aa16.56■□□□□ 0.24
SENP3-202ENST00000429205 DNAJC2Q99543 621 aaKnown RBP16.56■□□□□ 0.24
SENP3-202ENST00000429205 SLC52A2Q9HAB3 445 aa16.55■□□□□ 0.24
SENP3-202ENST00000429205 ADAMTS7Q9UKP4 1686 aa16.55■□□□□ 0.24
SENP3-202ENST00000429205 ZSCAN20P17040 1043 aaPredicted RBP16.55■□□□□ 0.24
SENP3-202ENST00000429205 EVA1CP58658 441 aa16.55■□□□□ 0.24
SENP3-202ENST00000429205 PIP4K2BP78356 416 aa16.55■□□□□ 0.24
SENP3-202ENST00000429205 SMC5Q8IY18 1101 aa16.55■□□□□ 0.24
SENP3-202ENST00000429205 NFATC2IPQ8NCF5 419 aa16.55■□□□□ 0.24
SENP3-202ENST00000429205 CARD10Q9BWT7 1032 aa16.55■□□□□ 0.24
SENP3-202ENST00000429205 PKD1L3Q7Z443 1732 aa16.54■□□□□ 0.24
SENP3-202ENST00000429205 SIRT2Q8IXJ6 389 aa16.54■□□□□ 0.24
SENP3-202ENST00000429205 DCAF5Q96JK2 942 aa16.54■□□□□ 0.24
SENP3-202ENST00000429205 GEMIN8Q9NWZ8 242 aaKnown RBP16.54■□□□□ 0.24
SENP3-202ENST00000429205 GIGYF1O75420 1035 aaPredicted RBP16.54■□□□□ 0.24
SENP3-202ENST00000429205 FRAT2O75474 233 aaPredicted RBP16.54■□□□□ 0.24
SENP3-202ENST00000429205 SLC39A6Q13433 755 aa16.54■□□□□ 0.24
SENP3-202ENST00000429205 DNTTIP2Q5QJE6 756 aaKnown RBP16.54■□□□□ 0.24
SENP3-202ENST00000429205 PHAXQ9H814 394 aaKnown RBP16.54■□□□□ 0.24
SENP3-202ENST00000429205 CHPF2Q9P2E5 772 aa16.54■□□□□ 0.24
SENP3-202ENST00000429205 HEG1Q9ULI3 1381 aa16.54■□□□□ 0.24
SENP3-202ENST00000429205 MEIS3Q99687 375 aa16.53■□□□□ 0.24
SENP3-202ENST00000429205 PARP4Q9UKK3 1724 aaKnown RBP16.53■□□□□ 0.24
SENP3-202ENST00000429205 SIPA1L3O60292 1781 aaPredicted RBP16.53■□□□□ 0.24
SENP3-202ENST00000429205 PHLPP1O60346 1717 aa16.53■□□□□ 0.24
SENP3-202ENST00000429205 SCN11AQ9UI33 1791 aa16.53■□□□□ 0.24
SENP3-202ENST00000429205 PRAMEF22A3QJZ6 481 aa16.53■□□□□ 0.24
SENP3-202ENST00000429205 ZCRB1Q8TBF4 217 aaKnown RBP16.53■□□□□ 0.24
SENP3-202ENST00000429205 BTG4Q9NY30 223 aa16.53■□□□□ 0.24
SENP3-202ENST00000429205 IL2RBP14784 551 aa16.52■□□□□ 0.24
SENP3-202ENST00000429205 CCT4P50991 539 aaKnown RBP16.52■□□□□ 0.24
SENP3-202ENST00000429205 ZNF790Q6PG37 636 aa16.52■□□□□ 0.24
SENP3-202ENST00000429205 FAM161AQ3B820 660 aa16.51■□□□□ 0.23
SENP3-202ENST00000429205 C8orf34Q49A92 452 aa16.51■□□□□ 0.23
SENP3-202ENST00000429205 ANXA1P04083 346 aa16.51■□□□□ 0.23
SENP3-202ENST00000429205 HSP90AB1P08238 724 aaKnown RBP16.51■□□□□ 0.23
SENP3-202ENST00000429205 PCDH11XQ9BZA7 1347 aa16.5■□□□□ 0.23
SENP3-202ENST00000429205 PCDH11YQ9BZA8 1340 aa16.5■□□□□ 0.23
SENP3-202ENST00000429205 PRDM10Q9NQV6 1147 aa16.5■□□□□ 0.23
SENP3-202ENST00000429205 ISY1Q9ULR0 285 aaKnown RBP16.5■□□□□ 0.23
SENP3-202ENST00000429205 COL22A1Q8NFW1 1626 aaPredicted RBP16.5■□□□□ 0.23
SENP3-202ENST00000429205 APPP05067 770 aa16.5■□□□□ 0.23
SENP3-202ENST00000429205 COL16A1Q07092 1604 aaPredicted RBP16.5■□□□□ 0.23
SENP3-202ENST00000429205 VGLL3A8MV65 326 aa16.49■□□□□ 0.23
SENP3-202ENST00000429205 ESPNB1AK53 854 aa16.49■□□□□ 0.23
SENP3-202ENST00000429205 NUCB1Q02818 461 aa16.49■□□□□ 0.23
SENP3-202ENST00000429205 ATP10DQ9P241 1426 aa16.48■□□□□ 0.23
SENP3-202ENST00000429205 TOM1O60784 492 aa16.48■□□□□ 0.23
SENP3-202ENST00000429205 KCNA4P22459 653 aa16.48■□□□□ 0.23
SENP3-202ENST00000429205 CABP4P57796 275 aa16.48■□□□□ 0.23
SENP3-202ENST00000429205 DBF4Q9UBU7 674 aaPredicted RBP16.48■□□□□ 0.23
SENP3-202ENST00000429205 MRC1P22897 1456 aa16.48■□□□□ 0.23
SENP3-202ENST00000429205 COL14A1Q05707 1796 aaKnown RBP16.48■□□□□ 0.23
SENP3-202ENST00000429205 ADAMTS2O95450 1211 aa16.47■□□□□ 0.23
SENP3-202ENST00000429205 PROSER3Q2NL68 480 aa16.47■□□□□ 0.23
SENP3-202ENST00000429205 NBPF20Q3BBV1 942 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms