RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 ADCK5Q3MIX3 580 aa15.01□□□□□ -0.01
CDH3-202ENST00000429102 KLHDC4Q8TBB5 520 aa15.01□□□□□ -0.01
CDH3-202ENST00000429102 ZHX1Q9UKY1 873 aaPredicted RBP15.01□□□□□ -0.01
CDH3-202ENST00000429102 SOS1Q07889 1333 aaPredicted RBP15.01□□□□□ -0.01
CDH3-202ENST00000429102 A0A0U1RQG5 324 aaPredicted RBP15.01□□□□□ -0.01
CDH3-202ENST00000429102 COL9A3Q14050 684 aaPredicted RBP15.01□□□□□ -0.01
CDH3-202ENST00000429102 SIGLEC1Q9BZZ2 1709 aa15.01□□□□□ -0.01
CDH3-202ENST00000429102 WDR33Q9C0J8 1336 aaKnown RBP15.01□□□□□ -0.01
CDH3-202ENST00000429102 GJB2P29033 226 aa15□□□□□ -0.01
CDH3-202ENST00000429102 LMTK2Q8IWU2 1503 aa15□□□□□ -0.01
CDH3-202ENST00000429102 ARAP3Q8WWN8 1544 aa15□□□□□ -0.01
CDH3-202ENST00000429102 MAP2P11137 1827 aaKnown RBP15□□□□□ -0.01
CDH3-202ENST00000429102 PIK3C2BO00750 1634 aa15□□□□□ -0.01
CDH3-202ENST00000429102 GOLGA6L4A6NEF3 574 aa15□□□□□ -0.01
CDH3-202ENST00000429102 STX6O43752 255 aa15□□□□□ -0.01
CDH3-202ENST00000429102 CBX1P83916 185 aa15□□□□□ -0.01
CDH3-202ENST00000429102 PTH1RQ03431 593 aa15□□□□□ -0.01
CDH3-202ENST00000429102 CWF19L2Q2TBE0 894 aaKnown RBP15□□□□□ -0.01
CDH3-202ENST00000429102 CLEC17AQ6ZS10 378 aa15□□□□□ -0.01
CDH3-202ENST00000429102 SNX14Q9Y5W7 946 aa15□□□□□ -0.01
CDH3-202ENST00000429102 IFT172Q9UG01 1749 aa15□□□□□ -0.01
CDH3-202ENST00000429102 SPDYE4A6NLX3 237 aa14.99□□□□□ -0.01
CDH3-202ENST00000429102 LTKP29376 864 aa14.99□□□□□ -0.01
CDH3-202ENST00000429102 BOLA2Q9H3K6 86 aa14.99□□□□□ -0.01
CDH3-202ENST00000429102 IFIT2P09913 472 aaKnown RBP14.99□□□□□ -0.01
CDH3-202ENST00000429102 LRRC59Q96AG4 307 aaKnown RBP14.99□□□□□ -0.01
CDH3-202ENST00000429102 EDC3Q96F86 508 aaKnown RBP14.99□□□□□ -0.01
CDH3-202ENST00000429102 AMOTL2Q9Y2J4 779 aa14.99□□□□□ -0.01
CDH3-202ENST00000429102 ALKQ9UM73 1620 aa14.99□□□□□ -0.01
CDH3-202ENST00000429102 PRAMEF22A3QJZ6 481 aa14.98□□□□□ -0.01
CDH3-202ENST00000429102 RGS12O14924 1447 aa14.98□□□□□ -0.01
CDH3-202ENST00000429102 MCM2P49736 904 aa14.98□□□□□ -0.01
CDH3-202ENST00000429102 RUFY3Q7L099 469 aa14.98□□□□□ -0.01
CDH3-202ENST00000429102 CNTROBQ8N137 903 aa14.98□□□□□ -0.01
CDH3-202ENST00000429102 DDX11Q96FC9 970 aa14.98□□□□□ -0.01
CDH3-202ENST00000429102 PDLIM2Q96JY6 352 aa14.98□□□□□ -0.01
CDH3-202ENST00000429102 ROBO2Q9HCK4 1378 aa14.98□□□□□ -0.01
CDH3-202ENST00000429102 TEFQ10587 303 aa14.98□□□□□ -0.01
CDH3-202ENST00000429102 AACSQ86V21 672 aa14.97□□□□□ -0.01
CDH3-202ENST00000429102 LRRC2Q9BYS8 371 aa14.97□□□□□ -0.01
CDH3-202ENST00000429102 PDRG1Q9NUG6 133 aa14.97□□□□□ -0.01
CDH3-202ENST00000429102 FGD1P98174 961 aa14.97□□□□□ -0.01
CDH3-202ENST00000429102 A0A087WWV3 80 aa14.97□□□□□ -0.01
CDH3-202ENST00000429102 PHF14O94880 888 aa14.97□□□□□ -0.01
CDH3-202ENST00000429102 ZSCAN22P10073 491 aaPredicted RBP14.97□□□□□ -0.01
CDH3-202ENST00000429102 ZNF592Q92610 1267 aa14.97□□□□□ -0.01
CDH3-202ENST00000429102 FAM227BQ96M60 508 aa14.97□□□□□ -0.01
CDH3-202ENST00000429102 HECW2Q9P2P5 1572 aa14.97□□□□□ -0.01
CDH3-202ENST00000429102 HDGFP51858 240 aaKnown RBP14.96□□□□□ -0.01
CDH3-202ENST00000429102 CHGBP05060 677 aa14.96□□□□□ -0.01
CDH3-202ENST00000429102 NOLC1Q14978 699 aaKnown RBP eCLIP14.96□□□□□ -0.01
CDH3-202ENST00000429102 LARP1BQ659C4 914 aaKnown RBP14.96□□□□□ -0.01
CDH3-202ENST00000429102 LIMCH1Q9UPQ0 1083 aa14.96□□□□□ -0.01
CDH3-202ENST00000429102 MYL6BP14649 208 aa14.96□□□□□ -0.02
CDH3-202ENST00000429102 CLASRPQ8N2M8 674 aaKnown RBP14.96□□□□□ -0.02
CDH3-202ENST00000429102 KDM4AO75164 1064 aa14.95□□□□□ -0.02
CDH3-202ENST00000429102 CSPP1Q1MSJ5 1256 aa14.95□□□□□ -0.02
CDH3-202ENST00000429102 MYO5BQ9ULV0 1848 aa14.95□□□□□ -0.02
CDH3-202ENST00000429102 ZNF500O60304 480 aaPredicted RBP14.94□□□□□ -0.02
CDH3-202ENST00000429102 CUL4AQ13619 759 aa14.94□□□□□ -0.02
CDH3-202ENST00000429102 CCDC183Q5T5S1 534 aa14.94□□□□□ -0.02
CDH3-202ENST00000429102 SASS6Q6UVJ0 657 aa14.94□□□□□ -0.02
CDH3-202ENST00000429102 OSBPL3Q9H4L5 887 aa14.94□□□□□ -0.02
CDH3-202ENST00000429102 HSPA4P34932 840 aa14.94□□□□□ -0.02
CDH3-202ENST00000429102 LUZP1Q86V48 1076 aa14.94□□□□□ -0.02
CDH3-202ENST00000429102 SGSM2O43147 1006 aa14.94□□□□□ -0.02
CDH3-202ENST00000429102 HSP90B1P14625 803 aaKnown RBP14.94□□□□□ -0.02
CDH3-202ENST00000429102 RAB11FIP3O75154 756 aa14.93□□□□□ -0.02
CDH3-202ENST00000429102 KIF1BPQ96EK5 621 aa14.93□□□□□ -0.02
CDH3-202ENST00000429102 NPHP1O15259 732 aa14.93□□□□□ -0.02
CDH3-202ENST00000429102 F13A1P00488 732 aa14.93□□□□□ -0.02
CDH3-202ENST00000429102 PROSER3Q2NL68 480 aa14.93□□□□□ -0.02
CDH3-202ENST00000429102 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.93□□□□□ -0.02
CDH3-202ENST00000429102 TAF6LQ9Y6J9 622 aa14.93□□□□□ -0.02
CDH3-202ENST00000429102 KNDC1Q76NI1 1749 aa14.93□□□□□ -0.02
CDH3-202ENST00000429102 DNAAF4Q8WXU2 420 aa14.93□□□□□ -0.02
CDH3-202ENST00000429102 ERCC4Q92889 916 aaPredicted RBP14.93□□□□□ -0.02
CDH3-202ENST00000429102 FSD1Q9BTV5 496 aa14.93□□□□□ -0.02
CDH3-202ENST00000429102 CPSF1Q10570 1443 aaKnown RBP14.93□□□□□ -0.02
CDH3-202ENST00000429102 IBTKQ9P2D0 1353 aaPredicted RBP14.92□□□□□ -0.02
CDH3-202ENST00000429102 BICD2Q8TD16 824 aa14.92□□□□□ -0.02
CDH3-202ENST00000429102 MAP3K2Q9Y2U5 619 aa14.92□□□□□ -0.02
CDH3-202ENST00000429102 CYP46A1Q9Y6A2 500 aa14.92□□□□□ -0.02
CDH3-202ENST00000429102 BTBD11A6QL63 1104 aa14.92□□□□□ -0.02
CDH3-202ENST00000429102 PYCARDQ9ULZ3 195 aa14.92□□□□□ -0.02
CDH3-202ENST00000429102 ZNF530Q6P9A1 599 aaPredicted RBP14.92□□□□□ -0.02
CDH3-202ENST00000429102 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.92□□□□□ -0.02
CDH3-202ENST00000429102 AATKQ6ZMQ8 1374 aa14.91□□□□□ -0.02
CDH3-202ENST00000429102 USP32Q8NFA0 1604 aa14.91□□□□□ -0.02
CDH3-202ENST00000429102 ZKSCAN1P17029 563 aaPredicted RBP14.91□□□□□ -0.02
CDH3-202ENST00000429102 ME3Q16798 604 aa14.91□□□□□ -0.02
CDH3-202ENST00000429102 PI4K2BQ8TCG2 481 aa14.91□□□□□ -0.02
CDH3-202ENST00000429102 CDK12Q9NYV4 1490 aaPredicted RBP14.91□□□□□ -0.02
CDH3-202ENST00000429102 AP5Z1O43299 807 aa14.91□□□□□ -0.02
CDH3-202ENST00000429102 LRMPQ12912 555 aa14.91□□□□□ -0.02
CDH3-202ENST00000429102 SLC39A6Q13433 755 aa14.91□□□□□ -0.02
CDH3-202ENST00000429102 TLR7Q9NYK1 1049 aaKnown RBP14.91□□□□□ -0.02
CDH3-202ENST00000429102 KIAA0232Q92628 1395 aa14.91□□□□□ -0.02
CDH3-202ENST00000429102 CRB1P82279 1406 aa14.91□□□□□ -0.02
CDH3-202ENST00000429102 LIG1P18858 919 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms