RNA–Protein interactions for RNA: ENST00000428939.3

HOTAIRM1-202, Transcript of HOXA transcript antisense RNA, myeloid-specific 1, humanhuman

TSL 2 BASIC

Gene HOTAIRM1, Length 889 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOTAIRM1-202ENST00000428939 PRIM1P49642 420 aaKnown RBP15.35■□□□□ 0.05
HOTAIRM1-202ENST00000428939 AAMPQ13685 434 aa15.35■□□□□ 0.05
HOTAIRM1-202ENST00000428939 ZNF772Q68DY9 489 aaPredicted RBP15.35■□□□□ 0.05
HOTAIRM1-202ENST00000428939 ITPRIPQ8IWB1 547 aa15.35■□□□□ 0.05
HOTAIRM1-202ENST00000428939 DBF4Q9UBU7 674 aaPredicted RBP15.35■□□□□ 0.05
HOTAIRM1-202ENST00000428939 VIRMAQ69YN4 1812 aaKnown RBP15.35■□□□□ 0.05
HOTAIRM1-202ENST00000428939 GLI3P10071 1580 aa15.35■□□□□ 0.05
HOTAIRM1-202ENST00000428939 ABCC4O15439 1325 aa15.35■□□□□ 0.05
HOTAIRM1-202ENST00000428939 BCL9O00512 1426 aa15.34■□□□□ 0.05
HOTAIRM1-202ENST00000428939 PRAMEF22A3QJZ6 481 aa15.34■□□□□ 0.05
HOTAIRM1-202ENST00000428939 FLIIQ13045 1269 aa15.34■□□□□ 0.05
HOTAIRM1-202ENST00000428939 B4GALNT3Q6L9W6 998 aa15.34■□□□□ 0.05
HOTAIRM1-202ENST00000428939 TMEM57Q8N5G2 664 aa15.34■□□□□ 0.05
HOTAIRM1-202ENST00000428939 CHPF2Q9P2E5 772 aa15.34■□□□□ 0.05
HOTAIRM1-202ENST00000428939 DDX19BQ9UMR2 479 aa15.34■□□□□ 0.05
HOTAIRM1-202ENST00000428939 TOGARAM1Q9Y4F4 1720 aa15.34■□□□□ 0.05
HOTAIRM1-202ENST00000428939 THSD7AQ9UPZ6 1657 aa15.33■□□□□ 0.04
HOTAIRM1-202ENST00000428939 ONECUT3O60422 494 aaPredicted RBP15.33■□□□□ 0.04
HOTAIRM1-202ENST00000428939 PTCD1O75127 700 aaKnown RBP15.33■□□□□ 0.04
HOTAIRM1-202ENST00000428939 FKBP5Q13451 457 aaPredicted RBP15.33■□□□□ 0.04
HOTAIRM1-202ENST00000428939 G2E3Q7L622 706 aa15.33■□□□□ 0.04
HOTAIRM1-202ENST00000428939 ACSBG1Q96GR2 724 aa15.33■□□□□ 0.04
HOTAIRM1-202ENST00000428939 CHMP4BQ9H444 224 aaKnown RBP15.33■□□□□ 0.04
HOTAIRM1-202ENST00000428939 ATG3Q9NT62 314 aa15.33■□□□□ 0.04
HOTAIRM1-202ENST00000428939 SEPT12Q8IYM1 358 aa15.32■□□□□ 0.04
HOTAIRM1-202ENST00000428939 DDX21Q9NR30 783 aaKnown RBP eCLIP15.32■□□□□ 0.04
HOTAIRM1-202ENST00000428939 HYPKQ9NX55 129 aa15.32■□□□□ 0.04
HOTAIRM1-202ENST00000428939 ASAP1Q9ULH1 1129 aa15.32■□□□□ 0.04
HOTAIRM1-202ENST00000428939 KCPQ6ZWJ8 1503 aa15.32■□□□□ 0.04
HOTAIRM1-202ENST00000428939 PAPPAQ13219 1627 aa15.31■□□□□ 0.04
HOTAIRM1-202ENST00000428939 RGS12O14924 1447 aa15.3■□□□□ 0.04
HOTAIRM1-202ENST00000428939 ERBB4Q15303 1308 aa15.3■□□□□ 0.04
HOTAIRM1-202ENST00000428939 VSIG10Q8N0Z9 540 aa15.3■□□□□ 0.04
HOTAIRM1-202ENST00000428939 RBM42Q9BTD8 480 aaKnown RBP15.3■□□□□ 0.04
HOTAIRM1-202ENST00000428939 TEX13AQ9BXU3 409 aaPredicted RBP15.3■□□□□ 0.04
HOTAIRM1-202ENST00000428939 USP16Q9Y5T5 823 aa15.3■□□□□ 0.04
HOTAIRM1-202ENST00000428939 ANXA1P04083 346 aa15.29■□□□□ 0.04
HOTAIRM1-202ENST00000428939 INTS3Q68E01 1043 aaKnown RBP15.29■□□□□ 0.04
HOTAIRM1-202ENST00000428939 PHAXQ9H814 394 aaKnown RBP15.29■□□□□ 0.04
HOTAIRM1-202ENST00000428939 DDX58O95786 925 aaKnown RBP15.28■□□□□ 0.04
HOTAIRM1-202ENST00000428939 CCT4P50991 539 aaKnown RBP15.28■□□□□ 0.04
HOTAIRM1-202ENST00000428939 RBM6P78332 1123 aaKnown RBP15.28■□□□□ 0.04
HOTAIRM1-202ENST00000428939 PROSER3Q2NL68 480 aa15.28■□□□□ 0.04
HOTAIRM1-202ENST00000428939 SLC4A10Q6U841 1118 aa15.28■□□□□ 0.04
HOTAIRM1-202ENST00000428939 SMARCC1Q92922 1105 aaPredicted RBP15.28■□□□□ 0.04
HOTAIRM1-202ENST00000428939 ATF5Q9Y2D1 282 aaPredicted RBP15.28■□□□□ 0.04
HOTAIRM1-202ENST00000428939 DOT1LQ8TEK3 1739 aa15.28■□□□□ 0.04
HOTAIRM1-202ENST00000428939 F6X3S4 739 aa15.27■□□□□ 0.04
HOTAIRM1-202ENST00000428939 MYL6BP14649 208 aa15.27■□□□□ 0.04
HOTAIRM1-202ENST00000428939 PDIA6Q15084 440 aa15.27■□□□□ 0.04
HOTAIRM1-202ENST00000428939 UBR2Q8IWV8 1755 aa15.26■□□□□ 0.03
HOTAIRM1-202ENST00000428939 STARD3NLO95772 234 aa15.26■□□□□ 0.03
HOTAIRM1-202ENST00000428939 DNAJC10Q8IXB1 793 aa15.26■□□□□ 0.03
HOTAIRM1-202ENST00000428939 C5P01031 1676 aa15.25■□□□□ 0.03
HOTAIRM1-202ENST00000428939 ZBTB7BO15156 539 aaPredicted RBP15.25■□□□□ 0.03
HOTAIRM1-202ENST00000428939 KCNQ2O43526 872 aa15.25■□□□□ 0.03
HOTAIRM1-202ENST00000428939 DNAAF4Q8WXU2 420 aa15.25■□□□□ 0.03
HOTAIRM1-202ENST00000428939 ZBTB40Q9NUA8 1239 aa15.25■□□□□ 0.03
HOTAIRM1-202ENST00000428939 PXDNLA1KZ92 1463 aa15.25■□□□□ 0.03
HOTAIRM1-202ENST00000428939 PALLDQ8WX93 1383 aa15.24■□□□□ 0.03
HOTAIRM1-202ENST00000428939 PI4KAP2A4QPH2 592 aa15.24■□□□□ 0.03
HOTAIRM1-202ENST00000428939 AIMP1Q12904 312 aaKnown RBP15.24■□□□□ 0.03
HOTAIRM1-202ENST00000428939 KSR2Q6VAB6 950 aa15.24■□□□□ 0.03
HOTAIRM1-202ENST00000428939 KRT27Q7Z3Y8 459 aa15.24■□□□□ 0.03
HOTAIRM1-202ENST00000428939 PI4KAP1Q8N8J0 262 aa15.24■□□□□ 0.03
HOTAIRM1-202ENST00000428939 XAGE3Q8WTP9 111 aa15.24■□□□□ 0.03
HOTAIRM1-202ENST00000428939 ITGB4P16144 1822 aa15.24■□□□□ 0.03
HOTAIRM1-202ENST00000428939 A1BGP04217 495 aa15.23■□□□□ 0.03
HOTAIRM1-202ENST00000428939 RXRBP28702 533 aa15.23■□□□□ 0.03
HOTAIRM1-202ENST00000428939 POLA2Q14181 598 aa15.23■□□□□ 0.03
HOTAIRM1-202ENST00000428939 FAM182BQ5T319 152 aa15.23■□□□□ 0.03
HOTAIRM1-202ENST00000428939 COPS6Q7L5N1 327 aa15.23■□□□□ 0.03
HOTAIRM1-202ENST00000428939 PELP1Q8IZL8 1130 aaKnown RBP15.23■□□□□ 0.03
HOTAIRM1-202ENST00000428939 LAMB4A4D0S4 1761 aa15.23■□□□□ 0.03
HOTAIRM1-202ENST00000428939 ADCY9O60503 1353 aa15.23■□□□□ 0.03
HOTAIRM1-202ENST00000428939 LOC102724428A0A0B4J2F2 783 aa15.22■□□□□ 0.03
HOTAIRM1-202ENST00000428939 NBPF26B4DH59 902 aa15.22■□□□□ 0.03
HOTAIRM1-202ENST00000428939 PIP4K2AP48426 406 aaPredicted RBP15.22■□□□□ 0.03
HOTAIRM1-202ENST00000428939 SIK1P57059 783 aa15.22■□□□□ 0.03
HOTAIRM1-202ENST00000428939 NBPF14Q5TI25 921 aa15.22■□□□□ 0.03
HOTAIRM1-202ENST00000428939 NBPF10Q6P3W6 841 aaKnown RBP15.22■□□□□ 0.03
HOTAIRM1-202ENST00000428939 CENPQQ7L2Z9 268 aaPredicted RBP15.22■□□□□ 0.03
HOTAIRM1-202ENST00000428939 LRP10Q7Z4F1 713 aa15.22■□□□□ 0.03
HOTAIRM1-202ENST00000428939 RIC3Q7Z5B4 369 aa15.22■□□□□ 0.03
HOTAIRM1-202ENST00000428939 NBPF15Q8N660 670 aa15.22■□□□□ 0.03
HOTAIRM1-202ENST00000428939 SLC4A9Q96Q91 983 aa15.22■□□□□ 0.03
HOTAIRM1-202ENST00000428939 SRCIN1Q9C0H9 1055 aa15.22■□□□□ 0.03
HOTAIRM1-202ENST00000428939 MAP3K2Q9Y2U5 619 aa15.22■□□□□ 0.03
HOTAIRM1-202ENST00000428939 CYP19A1P11511 503 aaPredicted RBP15.21■□□□□ 0.03
HOTAIRM1-202ENST00000428939 ATP6V1AP38606 617 aa15.21■□□□□ 0.03
HOTAIRM1-202ENST00000428939 FAM196AQ6ZSG2 479 aa15.21■□□□□ 0.03
HOTAIRM1-202ENST00000428939 PCDHB15Q9Y5E8 787 aa15.21■□□□□ 0.03
HOTAIRM1-202ENST00000428939 ATP10DQ9P241 1426 aa15.2■□□□□ 0.02
HOTAIRM1-202ENST00000428939 RWDD1Q9H446 243 aaPredicted RBP15.2■□□□□ 0.02
HOTAIRM1-202ENST00000428939 CACNA1FO60840 1977 aa15.19■□□□□ 0.02
HOTAIRM1-202ENST00000428939 ALDH1L1O75891 902 aa15.19■□□□□ 0.02
HOTAIRM1-202ENST00000428939 GNAI3P08754 354 aa15.19■□□□□ 0.02
HOTAIRM1-202ENST00000428939 NEXNQ0ZGT2 675 aa15.19■□□□□ 0.02
HOTAIRM1-202ENST00000428939 BEND3Q5T5X7 828 aa15.19■□□□□ 0.02
HOTAIRM1-202ENST00000428939 ANKRD13DQ6ZTN6 518 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms