RNA–Protein interactions for RNA: ENST00000428740.5

IMP4-204, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 924 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-204ENST00000428740 NFE2L2Q16236 605 aa19.84■□□□□ 0.77
IMP4-204ENST00000428740 SRP68Q9UHB9 627 aaKnown RBP19.84■□□□□ 0.77
IMP4-204ENST00000428740 ZBTB1Q9Y2K1 713 aa19.84■□□□□ 0.77
IMP4-204ENST00000428740 FKBP8Q14318 412 aa19.83■□□□□ 0.77
IMP4-204ENST00000428740 TJP1Q07157 1748 aa19.82■□□□□ 0.76
IMP4-204ENST00000428740 SNRPA1P09661 255 aaKnown RBP19.82■□□□□ 0.76
IMP4-204ENST00000428740 TM4SF1P30408 202 aa19.82■□□□□ 0.76
IMP4-204ENST00000428740 IL6STP40189 918 aaPredicted RBP19.82■□□□□ 0.76
IMP4-204ENST00000428740 EIF5P55010 431 aaKnown RBP19.82■□□□□ 0.76
IMP4-204ENST00000428740 USPL1Q5W0Q7 1092 aa19.82■□□□□ 0.76
IMP4-204ENST00000428740 MYH14Q7Z406 1995 aaKnown RBP19.82■□□□□ 0.76
IMP4-204ENST00000428740 YBX3P16989 372 aaKnown RBP eCLIP19.81■□□□□ 0.762e-12■■□□□ 12
IMP4-204ENST00000428740 DCTN1Q14203 1278 aa19.81■□□□□ 0.76
IMP4-204ENST00000428740 COL15A1P39059 1388 aa19.81■□□□□ 0.76
IMP4-204ENST00000428740 KCNQ3O43525 872 aa19.8■□□□□ 0.76
IMP4-204ENST00000428740 VIRMAQ69YN4 1812 aaKnown RBP19.79■□□□□ 0.76
IMP4-204ENST00000428740 LMOD3Q0VAK6 560 aa19.78■□□□□ 0.76
IMP4-204ENST00000428740 WDR43Q15061 677 aaKnown RBP eCLIP19.78■□□□□ 0.76
IMP4-204ENST00000428740 PRKRIP1Q9H875 184 aaPredicted RBP19.78■□□□□ 0.76
IMP4-204ENST00000428740 UBR2Q8IWV8 1755 aa19.78■□□□□ 0.76
IMP4-204ENST00000428740 A1BGP04217 495 aa19.77■□□□□ 0.76
IMP4-204ENST00000428740 USP16Q9Y5T5 823 aa19.77■□□□□ 0.76
IMP4-204ENST00000428740 A0A0G2JLW4 131 aa19.76■□□□□ 0.75
IMP4-204ENST00000428740 POLRMTO00411 1230 aaKnown RBP19.76■□□□□ 0.75
IMP4-204ENST00000428740 RIPK4P57078 832 aa19.76■□□□□ 0.75
IMP4-204ENST00000428740 DDR1Q08345 913 aa19.76■□□□□ 0.75
IMP4-204ENST00000428740 SIPA1L3O60292 1781 aaPredicted RBP19.75■□□□□ 0.75
IMP4-204ENST00000428740 NFIXQ14938 502 aa19.75■□□□□ 0.75
IMP4-204ENST00000428740 ZNF784Q8NCA9 323 aaPredicted RBP19.75■□□□□ 0.75
IMP4-204ENST00000428740 BABAM1Q9NWV8 329 aa19.75■□□□□ 0.75
IMP4-204ENST00000428740 ZNF330Q9Y3S2 320 aaPredicted RBP19.75■□□□□ 0.75
IMP4-204ENST00000428740 C10orf71Q711Q0 1435 aa19.75■□□□□ 0.75
IMP4-204ENST00000428740 DPEP1P16444 411 aa19.74■□□□□ 0.75
IMP4-204ENST00000428740 BCL2L12Q9HB09 334 aa19.74■□□□□ 0.75
IMP4-204ENST00000428740 PIM2Q9P1W9 311 aa19.74■□□□□ 0.75
IMP4-204ENST00000428740 C4AP0C0L4 1744 aa19.73■□□□□ 0.75
IMP4-204ENST00000428740 SERPINB2P05120 415 aa19.73■□□□□ 0.75
IMP4-204ENST00000428740 TMPOP42166 694 aaKnown RBP19.73■□□□□ 0.75
IMP4-204ENST00000428740 RUNDC1Q96C34 613 aa19.73■□□□□ 0.75
IMP4-204ENST00000428740 MIS18AQ9NYP9 233 aa19.73■□□□□ 0.75
IMP4-204ENST00000428740 TBC1D2BQ9UPU7 963 aa19.73■□□□□ 0.75
IMP4-204ENST00000428740 PXDNLA1KZ92 1463 aa19.72■□□□□ 0.75
IMP4-204ENST00000428740 RGL2O15211 777 aa19.71■□□□□ 0.75
IMP4-204ENST00000428740 CLEC4GQ6UXB4 293 aa19.71■□□□□ 0.75
IMP4-204ENST00000428740 DZIP3Q86Y13 1208 aaKnown RBP19.71■□□□□ 0.75
IMP4-204ENST00000428740 BCS1LQ9Y276 419 aa19.71■□□□□ 0.75
IMP4-204ENST00000428740 CHD4Q14839 1912 aa19.7■□□□□ 0.74
IMP4-204ENST00000428740 GIGYF1O75420 1035 aaPredicted RBP19.7■□□□□ 0.74
IMP4-204ENST00000428740 EIF4A1P60842 406 aaKnown RBP19.7■□□□□ 0.74
IMP4-204ENST00000428740 SETDB2Q96T68 719 aa19.7■□□□□ 0.74
IMP4-204ENST00000428740 ADAMTS8Q9UP79 889 aa19.7■□□□□ 0.74
IMP4-204ENST00000428740 PDZRN3Q9UPQ7 1066 aa19.7■□□□□ 0.74
IMP4-204ENST00000428740 ZNF652Q9Y2D9 606 aa19.7■□□□□ 0.74
IMP4-204ENST00000428740 PRAMEF22A3QJZ6 481 aa19.69■□□□□ 0.74
IMP4-204ENST00000428740 KCNA3P22001 575 aa19.69■□□□□ 0.74
IMP4-204ENST00000428740 DALRD3Q5D0E6 543 aaKnown RBP19.69■□□□□ 0.74
IMP4-204ENST00000428740 BICDL1Q6ZP65 573 aa19.69■□□□□ 0.74
IMP4-204ENST00000428740 THUMPD2Q9BTF0 503 aaKnown RBP19.69■□□□□ 0.74
IMP4-204ENST00000428740 ZNF316A6NFI3 1004 aaPredicted RBP19.68■□□□□ 0.74
IMP4-204ENST00000428740 CAMTA2O94983 1202 aa19.68■□□□□ 0.74
IMP4-204ENST00000428740 TBC1D9BQ66K14 1250 aa19.68■□□□□ 0.74
IMP4-204ENST00000428740 TSPYL4Q9UJ04 414 aa19.68■□□□□ 0.74
IMP4-204ENST00000428740 WWC3Q9ULE0 1092 aa19.68■□□□□ 0.74
IMP4-204ENST00000428740 KIF13BQ9NQT8 1826 aa19.67■□□□□ 0.74
IMP4-204ENST00000428740 H0YIN7 160 aa19.66■□□□□ 0.74
IMP4-204ENST00000428740 NEUROD2Q15784 382 aa19.66■□□□□ 0.74
IMP4-204ENST00000428740 ARHGAP27Q6ZUM4 889 aa19.66■□□□□ 0.74
IMP4-204ENST00000428740 CCDC146Q8IYE0 955 aa19.66■□□□□ 0.74
IMP4-204ENST00000428740 NBPF26B4DH59 902 aa19.65■□□□□ 0.74
IMP4-204ENST00000428740 NPHP1O15259 732 aa19.65■□□□□ 0.74
IMP4-204ENST00000428740 PDE6BP35913 854 aa19.65■□□□□ 0.74
IMP4-204ENST00000428740 NBPF10Q6P3W6 841 aaKnown RBP19.65■□□□□ 0.74
IMP4-204ENST00000428740 NBPF15Q8N660 670 aa19.65■□□□□ 0.74
IMP4-204ENST00000428740 BRIP1Q9BX63 1249 aa19.65■□□□□ 0.74
IMP4-204ENST00000428740 CARMIL3Q8ND23 1372 aa19.65■□□□□ 0.74
IMP4-204ENST00000428740 CHRNA5P30532 468 aa19.64■□□□□ 0.73
IMP4-204ENST00000428740 ERBB4Q15303 1308 aa19.64■□□□□ 0.73
IMP4-204ENST00000428740 PIP4K2AP48426 406 aaPredicted RBP19.63■□□□□ 0.73
IMP4-204ENST00000428740 RRP7AQ9Y3A4 280 aaKnown RBP19.63■□□□□ 0.73
IMP4-204ENST00000428740 ERVV-1B6SEH8 477 aa19.62■□□□□ 0.73
IMP4-204ENST00000428740 ST5P78524 1137 aa19.62■□□□□ 0.73
IMP4-204ENST00000428740 C2CD5Q86YS7 1000 aa19.62■□□□□ 0.73
IMP4-204ENST00000428740 DLG5Q8TDM6 1919 aa19.61■□□□□ 0.73
IMP4-204ENST00000428740 CHL1O00533 1208 aa19.61■□□□□ 0.73
IMP4-204ENST00000428740 TPTE2Q6XPS3 522 aa19.61■□□□□ 0.73
IMP4-204ENST00000428740 TTLL6Q8N841 843 aa19.61■□□□□ 0.73
IMP4-204ENST00000428740 CNBD1Q8NA66 436 aa19.61■□□□□ 0.73
IMP4-204ENST00000428740 TRIM35Q9UPQ4 493 aa19.61■□□□□ 0.73
IMP4-204ENST00000428740 CALD1Q05682 793 aaKnown RBP19.6■□□□□ 0.73
IMP4-204ENST00000428740 PRR5LQ6MZQ0 368 aa19.6■□□□□ 0.73
IMP4-204ENST00000428740 KIF6Q6ZMV9 814 aa19.6■□□□□ 0.73
IMP4-204ENST00000428740 NBPF5PQ86XG9 351 aaPredicted RBP19.6■□□□□ 0.73
IMP4-204ENST00000428740 ANP32CO43423 234 aa19.59■□□□□ 0.73
IMP4-204ENST00000428740 NIP7Q9Y221 180 aaKnown RBP eCLIP19.59■□□□□ 0.73
IMP4-204ENST00000428740 N4BP2Q86UW6 1770 aaPredicted RBP19.59■□□□□ 0.73
IMP4-204ENST00000428740 NGEFQ8N5V2 710 aa19.58■□□□□ 0.72
IMP4-204ENST00000428740 GPBP1L1Q9HC44 474 aaPredicted RBP19.58■□□□□ 0.72
IMP4-204ENST00000428740 KIAA1551Q9HCM1 1747 aa19.58■□□□□ 0.72
IMP4-204ENST00000428740 NRXN2Q9P2S2 1712 aa19.57■□□□□ 0.72
IMP4-204ENST00000428740 MYL6BP14649 208 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms