RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 TRIM37O94972 964 aa15.99■□□□□ 0.15
TRIM39-207ENST00000428404 G2E3Q7L622 706 aa15.99■□□□□ 0.15
TRIM39-207ENST00000428404 LRP10Q7Z4F1 713 aa15.99■□□□□ 0.15
TRIM39-207ENST00000428404 DDX21Q9NR30 783 aaKnown RBP eCLIP15.99■□□□□ 0.15
TRIM39-207ENST00000428404 BTAF1O14981 1849 aa15.98■□□□□ 0.15
TRIM39-207ENST00000428404 CYP19A1P11511 503 aaPredicted RBP15.98■□□□□ 0.15
TRIM39-207ENST00000428404 PDE3AQ14432 1141 aa15.98■□□□□ 0.15
TRIM39-207ENST00000428404 PROSER3Q2NL68 480 aa15.98■□□□□ 0.15
TRIM39-207ENST00000428404 ZKSCAN2Q63HK3 967 aa15.98■□□□□ 0.15
TRIM39-207ENST00000428404 FRAT1Q92837 279 aaPredicted RBP15.98■□□□□ 0.15
TRIM39-207ENST00000428404 PTPRCP08575 1304 aa15.97■□□□□ 0.15
TRIM39-207ENST00000428404 NBPF26B4DH59 902 aa15.97■□□□□ 0.15
TRIM39-207ENST00000428404 STARD3NLO95772 234 aa15.97■□□□□ 0.15
TRIM39-207ENST00000428404 TRIM27P14373 513 aa15.97■□□□□ 0.15
TRIM39-207ENST00000428404 ITPK1Q13572 414 aa15.97■□□□□ 0.15
TRIM39-207ENST00000428404 C20orf194Q5TEA3 1177 aa15.97■□□□□ 0.15
TRIM39-207ENST00000428404 NBPF14Q5TI25 921 aa15.97■□□□□ 0.15
TRIM39-207ENST00000428404 NBPF10Q6P3W6 841 aaKnown RBP15.97■□□□□ 0.15
TRIM39-207ENST00000428404 ATF7IPQ6VMQ6 1270 aa15.97■□□□□ 0.15
TRIM39-207ENST00000428404 NBPF15Q8N660 670 aa15.97■□□□□ 0.15
TRIM39-207ENST00000428404 HYPKQ9NX55 129 aa15.97■□□□□ 0.15
TRIM39-207ENST00000428404 ZNF831Q5JPB2 1677 aa15.96■□□□□ 0.15
TRIM39-207ENST00000428404 A1BGP04217 495 aa15.96■□□□□ 0.15
TRIM39-207ENST00000428404 ATP6V1AP38606 617 aa15.96■□□□□ 0.15
TRIM39-207ENST00000428404 FLIIQ13045 1269 aa15.96■□□□□ 0.15
TRIM39-207ENST00000428404 CICQ96RK0 1608 aaPredicted RBP15.96■□□□□ 0.15
TRIM39-207ENST00000428404 CACNA1FO60840 1977 aa15.96■□□□□ 0.15
TRIM39-207ENST00000428404 ANXA1P04083 346 aa15.95■□□□□ 0.14
TRIM39-207ENST00000428404 API5Q9BZZ5 524 aaKnown RBP15.95■□□□□ 0.14
TRIM39-207ENST00000428404 PHAXQ9H814 394 aaKnown RBP15.95■□□□□ 0.14
TRIM39-207ENST00000428404 TNNQ9UQP3 1299 aa15.95■□□□□ 0.14
TRIM39-207ENST00000428404 LAMB4A4D0S4 1761 aa15.95■□□□□ 0.14
TRIM39-207ENST00000428404 PLSCR1O15162 318 aa15.94■□□□□ 0.14
TRIM39-207ENST00000428404 MS4A1P11836 297 aa15.94■□□□□ 0.14
TRIM39-207ENST00000428404 RLBP1P12271 317 aa15.94■□□□□ 0.14
TRIM39-207ENST00000428404 CANXP27824 592 aaKnown RBP15.94■□□□□ 0.14
TRIM39-207ENST00000428404 TJP1Q07157 1748 aa15.94■□□□□ 0.14
TRIM39-207ENST00000428404 INTS5Q6P9B9 1019 aaKnown RBP15.93■□□□□ 0.14
TRIM39-207ENST00000428404 DZIP1LQ8IYY4 767 aaKnown RBP15.93■□□□□ 0.14
TRIM39-207ENST00000428404 PANK1Q8TE04 598 aa15.93■□□□□ 0.14
TRIM39-207ENST00000428404 ABCC4O15439 1325 aa15.93■□□□□ 0.14
TRIM39-207ENST00000428404 LY75O60449 1722 aa15.92■□□□□ 0.14
TRIM39-207ENST00000428404 NEFLP07196 543 aa15.92■□□□□ 0.14
TRIM39-207ENST00000428404 MYL6BP14649 208 aa15.92■□□□□ 0.14
TRIM39-207ENST00000428404 IRX6P78412 446 aaPredicted RBP15.92■□□□□ 0.14
TRIM39-207ENST00000428404 LINC00116Q8NCU8 138 aa15.92■□□□□ 0.14
TRIM39-207ENST00000428404 CRKLP46109 303 aaKnown RBP15.91■□□□□ 0.14
TRIM39-207ENST00000428404 PIP4K2AP48426 406 aaPredicted RBP15.91■□□□□ 0.14
TRIM39-207ENST00000428404 SLC27A3Q5K4L6 730 aa15.91■□□□□ 0.14
TRIM39-207ENST00000428404 RC3H1Q5TC82 1133 aaKnown RBP15.91■□□□□ 0.14
TRIM39-207ENST00000428404 COPS6Q7L5N1 327 aa15.91■□□□□ 0.14
TRIM39-207ENST00000428404 PROM2Q8N271 834 aa15.91■□□□□ 0.14
TRIM39-207ENST00000428404 XAGE3Q8WTP9 111 aa15.91■□□□□ 0.14
TRIM39-207ENST00000428404 CLUAP1Q96AJ1 413 aa15.91■□□□□ 0.14
TRIM39-207ENST00000428404 LRRC4BQ9NT99 713 aa15.91■□□□□ 0.14
TRIM39-207ENST00000428404 CCDC87Q9NVE4 849 aa15.91■□□□□ 0.14
TRIM39-207ENST00000428404 CCNL1Q9UK58 526 aaPredicted RBP15.91■□□□□ 0.14
TRIM39-207ENST00000428404 APBA3O96018 575 aa15.9■□□□□ 0.14
TRIM39-207ENST00000428404 KCNQ4P56696 695 aa15.9■□□□□ 0.14
TRIM39-207ENST00000428404 FKBP5Q13451 457 aaPredicted RBP15.9■□□□□ 0.14
TRIM39-207ENST00000428404 FKBP8Q14318 412 aa15.9■□□□□ 0.14
TRIM39-207ENST00000428404 INTS3Q68E01 1043 aaKnown RBP15.9■□□□□ 0.14
TRIM39-207ENST00000428404 ZBTB1Q9Y2K1 713 aa15.9■□□□□ 0.14
TRIM39-207ENST00000428404 CNTNAP4Q9C0A0 1308 aa15.9■□□□□ 0.14
TRIM39-207ENST00000428404 PI4KAP2A4QPH2 592 aa15.89■□□□□ 0.13
TRIM39-207ENST00000428404 IL6STP40189 918 aaPredicted RBP15.89■□□□□ 0.13
TRIM39-207ENST00000428404 EIF5P55010 431 aaKnown RBP15.89■□□□□ 0.13
TRIM39-207ENST00000428404 ERICH6BQ5W0A0 696 aa15.89■□□□□ 0.13
TRIM39-207ENST00000428404 KSR2Q6VAB6 950 aa15.89■□□□□ 0.13
TRIM39-207ENST00000428404 FTSJ3Q8IY81 847 aaKnown RBP15.89■□□□□ 0.13
TRIM39-207ENST00000428404 TMEM57Q8N5G2 664 aa15.89■□□□□ 0.13
TRIM39-207ENST00000428404 PI4KAP1Q8N8J0 262 aa15.89■□□□□ 0.13
TRIM39-207ENST00000428404 CRBNQ96SW2 442 aa15.89■□□□□ 0.13
TRIM39-207ENST00000428404 RREB1Q92766 1687 aa15.89■□□□□ 0.13
TRIM39-207ENST00000428404 ADCY9O60503 1353 aa15.88■□□□□ 0.13
TRIM39-207ENST00000428404 F6X3S4 739 aa15.88■□□□□ 0.13
TRIM39-207ENST00000428404 DDX58O95786 925 aaKnown RBP15.88■□□□□ 0.13
TRIM39-207ENST00000428404 TXNRD1Q16881 649 aa15.88■□□□□ 0.13
TRIM39-207ENST00000428404 EXOC6Q8TAG9 804 aa15.88■□□□□ 0.13
TRIM39-207ENST00000428404 COL5A3P25940 1745 aaPredicted RBP15.88■□□□□ 0.13
TRIM39-207ENST00000428404 AIMP1Q12904 312 aaKnown RBP15.87■□□□□ 0.13
TRIM39-207ENST00000428404 MVPQ14764 893 aaKnown RBP15.87■□□□□ 0.13
TRIM39-207ENST00000428404 TTLL7Q6ZT98 887 aa15.87■□□□□ 0.13
TRIM39-207ENST00000428404 ANKRD13DQ6ZTN6 518 aa15.87■□□□□ 0.13
TRIM39-207ENST00000428404 COG6Q9Y2V7 657 aa15.87■□□□□ 0.13
TRIM39-207ENST00000428404 GTF3C3Q9Y5Q9 886 aa15.87■□□□□ 0.13
TRIM39-207ENST00000428404 MYH14Q7Z406 1995 aaKnown RBP15.87■□□□□ 0.13
TRIM39-207ENST00000428404 TNS1Q9HBL0 1735 aaKnown RBP15.86■□□□□ 0.13
TRIM39-207ENST00000428404 HMGB2P26583 209 aaKnown RBP15.86■□□□□ 0.13
TRIM39-207ENST00000428404 PLBD2Q8NHP8 589 aa15.86■□□□□ 0.13
TRIM39-207ENST00000428404 DNAAF4Q8WXU2 420 aa15.86■□□□□ 0.13
TRIM39-207ENST00000428404 MAP3K2Q9Y2U5 619 aa15.86■□□□□ 0.13
TRIM39-207ENST00000428404 RPS6KA4O75676 772 aa15.85■□□□□ 0.13
TRIM39-207ENST00000428404 CCT4P50991 539 aaKnown RBP15.85■□□□□ 0.13
TRIM39-207ENST00000428404 BEND3Q5T5X7 828 aa15.85■□□□□ 0.13
TRIM39-207ENST00000428404 CAMKK2Q96RR4 588 aa15.85■□□□□ 0.13
TRIM39-207ENST00000428404 PXDNLA1KZ92 1463 aa15.84■□□□□ 0.13
TRIM39-207ENST00000428404 ZBTB7BO15156 539 aaPredicted RBP15.84■□□□□ 0.13
TRIM39-207ENST00000428404 RIC3Q7Z5B4 369 aa15.84■□□□□ 0.13
TRIM39-207ENST00000428404 METTL22Q9BUU2 404 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms