RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 CDCA7LQ96GN5 454 aa19.57■□□□□ 0.72
VARS2-203ENST00000428017 USP16Q9Y5T5 823 aa19.57■□□□□ 0.72
VARS2-203ENST00000428017 EIF2S2P20042 333 aaKnown RBP19.56■□□□□ 0.72
VARS2-203ENST00000428017 EXOSC9Q06265 439 aaKnown RBP19.56■□□□□ 0.72
VARS2-203ENST00000428017 ZNF827Q17R98 1081 aa19.56■□□□□ 0.72
VARS2-203ENST00000428017 C8orf58Q8NAV2 365 aa19.56■□□□□ 0.72
VARS2-203ENST00000428017 AKT1S1Q96B36 256 aa19.56■□□□□ 0.72
VARS2-203ENST00000428017 ANO8Q9HCE9 1232 aaPredicted RBP19.56■□□□□ 0.72
VARS2-203ENST00000428017 ZNF831Q5JPB2 1677 aa19.56■□□□□ 0.72
VARS2-203ENST00000428017 SOS1Q07889 1333 aaPredicted RBP19.55■□□□□ 0.72
VARS2-203ENST00000428017 CANXP27824 592 aaKnown RBP19.55■□□□□ 0.72
VARS2-203ENST00000428017 RTCBQ9Y3I0 505 aaKnown RBP19.55■□□□□ 0.72
VARS2-203ENST00000428017 TWISTNBQ3B726 338 aaPredicted RBP19.54■□□□□ 0.72
VARS2-203ENST00000428017 HDGFL1Q5TGJ6 251 aa19.54■□□□□ 0.72
VARS2-203ENST00000428017 C5P01031 1676 aa19.54■□□□□ 0.72
VARS2-203ENST00000428017 NUP188Q5SRE5 1749 aa19.54■□□□□ 0.72
VARS2-203ENST00000428017 PHF14O94880 888 aa19.53■□□□□ 0.72
VARS2-203ENST00000428017 A1BGP04217 495 aa19.53■□□□□ 0.72
VARS2-203ENST00000428017 INTS5Q6P9B9 1019 aaKnown RBP19.53■□□□□ 0.72
VARS2-203ENST00000428017 FLAD1Q8NFF5 587 aa19.53■□□□□ 0.72
VARS2-203ENST00000428017 NECTIN2Q92692 538 aa19.53■□□□□ 0.72
VARS2-203ENST00000428017 ZBTB1Q9Y2K1 713 aa19.53■□□□□ 0.72
VARS2-203ENST00000428017 ZNF330Q9Y3S2 320 aaPredicted RBP19.53■□□□□ 0.72
VARS2-203ENST00000428017 TJP1Q07157 1748 aa19.53■□□□□ 0.72
VARS2-203ENST00000428017 CICQ96RK0 1608 aaPredicted RBP19.52■□□□□ 0.72
VARS2-203ENST00000428017 C4BP0C0L5 1744 aa19.52■□□□□ 0.72
VARS2-203ENST00000428017 MSH5O43196 834 aa19.52■□□□□ 0.72
VARS2-203ENST00000428017 RPS6KA4O75676 772 aa19.52■□□□□ 0.72
VARS2-203ENST00000428017 R3HDM1Q15032 1099 aaKnown RBP19.52■□□□□ 0.72
VARS2-203ENST00000428017 TSPYL6Q8N831 410 aa19.52■□□□□ 0.72
VARS2-203ENST00000428017 ERBB4Q15303 1308 aa19.51■□□□□ 0.71
VARS2-203ENST00000428017 SSFA2P28290 1259 aa19.51■□□□□ 0.71
VARS2-203ENST00000428017 TRAPPC3LQ5T215 181 aa19.51■□□□□ 0.71
VARS2-203ENST00000428017 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.5■□□□□ 0.71
VARS2-203ENST00000428017 ADRA2BP18089 450 aa19.5■□□□□ 0.71
VARS2-203ENST00000428017 IL6STP40189 918 aaPredicted RBP19.5■□□□□ 0.71
VARS2-203ENST00000428017 CCDC30Q5VVM6 783 aa19.5■□□□□ 0.71
VARS2-203ENST00000428017 TRMT2AQ8IZ69 625 aaKnown RBP19.5■□□□□ 0.71
VARS2-203ENST00000428017 ARXQ96QS3 562 aa19.5■□□□□ 0.71
VARS2-203ENST00000428017 PIP4K2AP48426 406 aaPredicted RBP19.49■□□□□ 0.71
VARS2-203ENST00000428017 STK31Q9BXU1 1019 aa19.49■□□□□ 0.71
VARS2-203ENST00000428017 DBF4Q9UBU7 674 aaPredicted RBP19.49■□□□□ 0.71
VARS2-203ENST00000428017 A0A087WZG4 1122 aa19.48■□□□□ 0.71
VARS2-203ENST00000428017 PSDA5PKW4 1024 aaPredicted RBP19.48■□□□□ 0.71
VARS2-203ENST00000428017 MYL6BP14649 208 aa19.48■□□□□ 0.71
VARS2-203ENST00000428017 RFC4P35249 363 aa19.48■□□□□ 0.71
VARS2-203ENST00000428017 COL5A3P25940 1745 aaPredicted RBP19.48■□□□□ 0.71
VARS2-203ENST00000428017 TAF1LQ8IZX4 1826 aa19.47■□□□□ 0.71
VARS2-203ENST00000428017 DDX21Q9NR30 783 aaKnown RBP eCLIP19.47■□□□□ 0.71
VARS2-203ENST00000428017 CHPF2Q9P2E5 772 aa19.47■□□□□ 0.71
VARS2-203ENST00000428017 PNPLA7Q6ZV29 1317 aa19.47■□□□□ 0.71
VARS2-203ENST00000428017 NBPF26B4DH59 902 aa19.46■□□□□ 0.71
VARS2-203ENST00000428017 VAMP4O75379 141 aa19.46■□□□□ 0.71
VARS2-203ENST00000428017 CT47B1P0C2W7 299 aaPredicted RBP19.46■□□□□ 0.71
VARS2-203ENST00000428017 EIF5P55010 431 aaKnown RBP19.46■□□□□ 0.71
VARS2-203ENST00000428017 NBPF10Q6P3W6 841 aaKnown RBP19.46■□□□□ 0.71
VARS2-203ENST00000428017 SMIM5Q71RC9 77 aa19.46■□□□□ 0.71
VARS2-203ENST00000428017 NBPF15Q8N660 670 aa19.46■□□□□ 0.71
VARS2-203ENST00000428017 COL15A1P39059 1388 aa19.45■□□□□ 0.7
VARS2-203ENST00000428017 LAMB4A4D0S4 1761 aa19.45■□□□□ 0.7
VARS2-203ENST00000428017 ZPR1O75312 459 aa19.45■□□□□ 0.7
VARS2-203ENST00000428017 AMIGO3Q86WK7 504 aa19.45■□□□□ 0.7
VARS2-203ENST00000428017 COL23A1Q86Y22 540 aaPredicted RBP19.45■□□□□ 0.7
VARS2-203ENST00000428017 ARHGEF1Q92888 912 aaKnown RBP19.45■□□□□ 0.7
VARS2-203ENST00000428017 HYPKQ9NX55 129 aa19.45■□□□□ 0.7
VARS2-203ENST00000428017 ZNF428Q96B54 188 aa19.44■□□□□ 0.7
VARS2-203ENST00000428017 TCERG1O14776 1098 aaKnown RBP19.43■□□□□ 0.7
VARS2-203ENST00000428017 ANXA1P04083 346 aa19.43■□□□□ 0.7
VARS2-203ENST00000428017 PROSER3Q2NL68 480 aa19.43■□□□□ 0.7
VARS2-203ENST00000428017 KIF6Q6ZMV9 814 aa19.43■□□□□ 0.7
VARS2-203ENST00000428017 DZIP3Q86Y13 1208 aaKnown RBP19.43■□□□□ 0.7
VARS2-203ENST00000428017 PDIA6Q15084 440 aa19.42■□□□□ 0.7
VARS2-203ENST00000428017 SLC4A2P04920 1241 aa19.41■□□□□ 0.7
VARS2-203ENST00000428017 AIMP1Q12904 312 aaKnown RBP19.41■□□□□ 0.7
VARS2-203ENST00000428017 SLC16A10Q8TF71 515 aa19.41■□□□□ 0.7
VARS2-203ENST00000428017 TBC1D2BQ9UPU7 963 aa19.41■□□□□ 0.7
VARS2-203ENST00000428017 COPS6Q7L5N1 327 aa19.4■□□□□ 0.7
VARS2-203ENST00000428017 XAGE3Q8WTP9 111 aa19.4■□□□□ 0.7
VARS2-203ENST00000428017 NARFQ9UHQ1 456 aa19.4■□□□□ 0.7
VARS2-203ENST00000428017 PDGFDQ9GZP0 370 aaPredicted RBP19.39■□□□□ 0.69
VARS2-203ENST00000428017 SRP68Q9UHB9 627 aaKnown RBP19.39■□□□□ 0.69
VARS2-203ENST00000428017 ZNF652Q9Y2D9 606 aa19.39■□□□□ 0.69
VARS2-203ENST00000428017 USP42Q9H9J4 1324 aaKnown RBP19.39■□□□□ 0.69
VARS2-203ENST00000428017 MYH14Q7Z406 1995 aaKnown RBP19.39■□□□□ 0.69
VARS2-203ENST00000428017 ZBTB7AO95365 584 aa19.38■□□□□ 0.69
VARS2-203ENST00000428017 DDX58O95786 925 aaKnown RBP19.38■□□□□ 0.69
VARS2-203ENST00000428017 ALDH1L2Q3SY69 923 aa19.38■□□□□ 0.69
VARS2-203ENST00000428017 USPL1Q5W0Q7 1092 aa19.38■□□□□ 0.69
VARS2-203ENST00000428017 UBR3Q6ZT12 1888 aa19.38■□□□□ 0.69
VARS2-203ENST00000428017 TTLL7Q6ZT98 887 aa19.38■□□□□ 0.69
VARS2-203ENST00000428017 SMC4Q9NTJ3 1288 aa19.38■□□□□ 0.69
VARS2-203ENST00000428017 NLGN1Q8N2Q7 840 aa19.37■□□□□ 0.69
VARS2-203ENST00000428017 MTFR1LQ9H019 292 aa19.37■□□□□ 0.69
VARS2-203ENST00000428017 PHAXQ9H814 394 aaKnown RBP19.37■□□□□ 0.69
VARS2-203ENST00000428017 MAP3K15Q6ZN16 1313 aa19.36■□□□□ 0.69
VARS2-203ENST00000428017 CAMTA2O94983 1202 aa19.36■□□□□ 0.69
VARS2-203ENST00000428017 LRP10Q7Z4F1 713 aa19.36■□□□□ 0.69
VARS2-203ENST00000428017 SSH1Q8WYL5 1049 aa19.36■□□□□ 0.69
VARS2-203ENST00000428017 ZBTB3Q9H5J0 574 aa19.36■□□□□ 0.69
VARS2-203ENST00000428017 ERVV-1B6SEH8 477 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms