RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 ZBTB1Q9Y2K1 713 aa27.3■■□□□ 1.96
HSPG2-205ENST00000427897 USP42Q9H9J4 1324 aaKnown RBP27.3■■□□□ 1.96
HSPG2-205ENST00000427897 TAF7Q15545 349 aaPredicted RBP27.29■■□□□ 1.96
HSPG2-205ENST00000427897 NFE2L2Q16236 605 aa27.29■■□□□ 1.96
HSPG2-205ENST00000427897 ZNF330Q9Y3S2 320 aaPredicted RBP27.29■■□□□ 1.96
HSPG2-205ENST00000427897 SOS1Q07889 1333 aaPredicted RBP27.29■■□□□ 1.96
HSPG2-205ENST00000427897 C4AP0C0L4 1744 aa27.29■■□□□ 1.96
HSPG2-205ENST00000427897 GRIN3BO60391 1043 aa27.28■■□□□ 1.96
HSPG2-205ENST00000427897 USPL1Q5W0Q7 1092 aa27.28■■□□□ 1.96
HSPG2-205ENST00000427897 KCNQ3O43525 872 aa27.27■■□□□ 1.96
HSPG2-205ENST00000427897 COL15A1P39059 1388 aa27.26■■□□□ 1.95
HSPG2-205ENST00000427897 A0A087WZG4 1122 aa27.26■■□□□ 1.95
HSPG2-205ENST00000427897 FKBP8Q14318 412 aa27.26■■□□□ 1.95
HSPG2-205ENST00000427897 PNISRQ8TF01 805 aaKnown RBP27.25■■□□□ 1.95
HSPG2-205ENST00000427897 NARFQ9UHQ1 456 aa27.25■■□□□ 1.95
HSPG2-205ENST00000427897 PRKRIP1Q9H875 184 aaPredicted RBP27.24■■□□□ 1.95
HSPG2-205ENST00000427897 DLG5Q8TDM6 1919 aa27.24■■□□□ 1.95
HSPG2-205ENST00000427897 SNRPA1P09661 255 aaKnown RBP27.23■■□□□ 1.95
HSPG2-205ENST00000427897 WWC3Q9ULE0 1092 aa27.23■■□□□ 1.95
HSPG2-205ENST00000427897 RIPK4P57078 832 aa27.22■■□□□ 1.95
HSPG2-205ENST00000427897 MIS18AQ9NYP9 233 aa27.22■■□□□ 1.95
HSPG2-205ENST00000427897 A1BGP04217 495 aa27.21■■□□□ 1.95
HSPG2-205ENST00000427897 YBX3P16989 372 aaKnown RBP eCLIP27.21■■□□□ 1.95
HSPG2-205ENST00000427897 TGFB2P61812 414 aa27.21■■□□□ 1.95
HSPG2-205ENST00000427897 CHD4Q14839 1912 aa27.2■■□□□ 1.95
HSPG2-205ENST00000427897 ZNF316A6NFI3 1004 aaPredicted RBP27.19■■□□□ 1.94
HSPG2-205ENST00000427897 IL6STP40189 918 aaPredicted RBP27.19■■□□□ 1.94
HSPG2-205ENST00000427897 EIF5P55010 431 aaKnown RBP27.19■■□□□ 1.94
HSPG2-205ENST00000427897 LMOD3Q0VAK6 560 aa27.19■■□□□ 1.94
HSPG2-205ENST00000427897 CCDC146Q8IYE0 955 aa27.19■■□□□ 1.94
HSPG2-205ENST00000427897 USP16Q9Y5T5 823 aa27.19■■□□□ 1.94
HSPG2-205ENST00000427897 NEUROD2Q15784 382 aa27.18■■□□□ 1.94
HSPG2-205ENST00000427897 THUMPD2Q9BTF0 503 aaKnown RBP27.18■■□□□ 1.94
HSPG2-205ENST00000427897 A0A0G2JLW4 131 aa27.17■■□□□ 1.94
HSPG2-205ENST00000427897 TM4SF1P30408 202 aa27.17■■□□□ 1.94
HSPG2-205ENST00000427897 TBC1D2BQ9UPU7 963 aa27.17■■□□□ 1.94
HSPG2-205ENST00000427897 BICDL1Q6ZP65 573 aa27.16■■□□□ 1.94
HSPG2-205ENST00000427897 TMPOP42166 694 aaKnown RBP27.15■■□□□ 1.94
HSPG2-205ENST00000427897 DDR1Q08345 913 aa27.15■■□□□ 1.94
HSPG2-205ENST00000427897 RUNDC1Q96C34 613 aa27.15■■□□□ 1.94
HSPG2-205ENST00000427897 PRAMEF22A3QJZ6 481 aa27.14■■□□□ 1.94
HSPG2-205ENST00000427897 POLRMTO00411 1230 aaKnown RBP27.14■■□□□ 1.94
HSPG2-205ENST00000427897 ADAMTS8Q9UP79 889 aa27.14■■□□□ 1.94
HSPG2-205ENST00000427897 PIP4K2AP48426 406 aaPredicted RBP27.13■■□□□ 1.93
HSPG2-205ENST00000427897 NFIXQ14938 502 aa27.13■■□□□ 1.93
HSPG2-205ENST00000427897 DZIP3Q86Y13 1208 aaKnown RBP27.13■■□□□ 1.93
HSPG2-205ENST00000427897 RRP7AQ9Y3A4 280 aaKnown RBP27.13■■□□□ 1.93
HSPG2-205ENST00000427897 C10orf71Q711Q0 1435 aa27.13■■□□□ 1.93
HSPG2-205ENST00000427897 NPHP1O15259 732 aa27.12■■□□□ 1.93
HSPG2-205ENST00000427897 TSPYL4Q9UJ04 414 aa27.12■■□□□ 1.93
HSPG2-205ENST00000427897 BCS1LQ9Y276 419 aa27.12■■□□□ 1.93
HSPG2-205ENST00000427897 KIF13BQ9NQT8 1826 aa27.11■■□□□ 1.93
HSPG2-205ENST00000427897 SERPINB2P05120 415 aa27.11■■□□□ 1.93
HSPG2-205ENST00000427897 DPEP1P16444 411 aa27.11■■□□□ 1.93
HSPG2-205ENST00000427897 N4BP2Q86UW6 1770 aaPredicted RBP27.11■■□□□ 1.93
HSPG2-205ENST00000427897 BCL2L12Q9HB09 334 aa27.1■■□□□ 1.93
HSPG2-205ENST00000427897 PXDNLA1KZ92 1463 aa27.1■■□□□ 1.93
HSPG2-205ENST00000427897 EIF4A1P60842 406 aaKnown RBP27.08■■□□□ 1.93
HSPG2-205ENST00000427897 PIM2Q9P1W9 311 aa27.08■■□□□ 1.93
HSPG2-205ENST00000427897 TBC1D9BQ66K14 1250 aa27.07■■□□□ 1.92
HSPG2-205ENST00000427897 SETDB2Q96T68 719 aa27.07■■□□□ 1.92
HSPG2-205ENST00000427897 ZNF652Q9Y2D9 606 aa27.07■■□□□ 1.92
HSPG2-205ENST00000427897 LAS1LQ9Y4W2 734 aaKnown RBP27.07■■□□□ 1.92
HSPG2-205ENST00000427897 ANP32CO43423 234 aa27.06■■□□□ 1.92
HSPG2-205ENST00000427897 GIGYF1O75420 1035 aaPredicted RBP27.06■■□□□ 1.92
HSPG2-205ENST00000427897 ZNF784Q8NCA9 323 aaPredicted RBP27.06■■□□□ 1.92
HSPG2-205ENST00000427897 KDM3BQ7LBC6 1761 aa27.06■■□□□ 1.92
HSPG2-205ENST00000427897 NGEFQ8N5V2 710 aa27.05■■□□□ 1.92
HSPG2-205ENST00000427897 CAMTA2O94983 1202 aa27.04■■□□□ 1.92
HSPG2-205ENST00000427897 BABAM1Q9NWV8 329 aa27.04■■□□□ 1.92
HSPG2-205ENST00000427897 CHRNA5P30532 468 aa27.03■■□□□ 1.92
HSPG2-205ENST00000427897 ARHGAP27Q6ZUM4 889 aa27.03■■□□□ 1.92
HSPG2-205ENST00000427897 DALRD3Q5D0E6 543 aaKnown RBP27.02■■□□□ 1.92
HSPG2-205ENST00000427897 AFDNP55196 1824 aaKnown RBP27.02■■□□□ 1.92
HSPG2-205ENST00000427897 CARMIL3Q8ND23 1372 aa27.01■■□□□ 1.91
HSPG2-205ENST00000427897 NBPF26B4DH59 902 aa27.01■■□□□ 1.91
HSPG2-205ENST00000427897 MYL6BP14649 208 aa27.01■■□□□ 1.91
HSPG2-205ENST00000427897 NBPF10Q6P3W6 841 aaKnown RBP27.01■■□□□ 1.91
HSPG2-205ENST00000427897 NBPF15Q8N660 670 aa27.01■■□□□ 1.91
HSPG2-205ENST00000427897 SCN7AQ01118 1682 aa27.01■■□□□ 1.91
HSPG2-205ENST00000427897 LAMB4A4D0S4 1761 aa27■■□□□ 1.91
HSPG2-205ENST00000427897 KIAA1551Q9HCM1 1747 aa27■■□□□ 1.91
HSPG2-205ENST00000427897 H0YIN7 160 aa27■■□□□ 1.91
HSPG2-205ENST00000427897 CLEC4GQ6UXB4 293 aa27■■□□□ 1.91
HSPG2-205ENST00000427897 EIF2S2P20042 333 aaKnown RBP26.99■■□□□ 1.91
HSPG2-205ENST00000427897 KCNA3P22001 575 aa26.99■■□□□ 1.91
HSPG2-205ENST00000427897 UTRNP46939 3433 aa26.99■■□□□ 1.91
HSPG2-205ENST00000427897 ST5P78524 1137 aa26.98■■□□□ 1.91
HSPG2-205ENST00000427897 KIF6Q6ZMV9 814 aa26.98■■□□□ 1.91
HSPG2-205ENST00000427897 C2CD5Q86YS7 1000 aa26.98■■□□□ 1.91
HSPG2-205ENST00000427897 TRIM35Q9UPQ4 493 aa26.98■■□□□ 1.91
HSPG2-205ENST00000427897 GOLGB1Q14789 3259 aaKnown RBP26.98■■□□□ 1.91
HSPG2-205ENST00000427897 PDE6BP35913 854 aa26.97■■□□□ 1.91
HSPG2-205ENST00000427897 CNBD1Q8NA66 436 aa26.97■■□□□ 1.91
HSPG2-205ENST00000427897 APAF1O14727 1248 aa26.96■■□□□ 1.91
HSPG2-205ENST00000427897 NRXN2Q9P2S2 1712 aa26.96■■□□□ 1.91
HSPG2-205ENST00000427897 NBPF5PQ86XG9 351 aaPredicted RBP26.95■■□□□ 1.9
HSPG2-205ENST00000427897 CCDC24Q8N4L8 307 aa26.95■■□□□ 1.9
HSPG2-205ENST00000427897 PDZRN3Q9UPQ7 1066 aa26.95■■□□□ 1.9
HSPG2-205ENST00000427897 NIP7Q9Y221 180 aaKnown RBP eCLIP26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms