RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 TTLL6Q8N841 843 aa13.03□□□□□ -0.32
LSG1-202ENST00000427461 SPG7Q9UQ90 795 aa13.03□□□□□ -0.32
LSG1-202ENST00000427461 PDE4DIPQ5VU43 2346 aa13.02□□□□□ -0.32
LSG1-202ENST00000427461 RASSF10A6NK89 507 aa13.02□□□□□ -0.33
LSG1-202ENST00000427461 PHKG2P15735 406 aa13.02□□□□□ -0.33
LSG1-202ENST00000427461 LDHDQ86WU2 507 aa13.02□□□□□ -0.33
LSG1-202ENST00000427461 GGNBP2Q9H3C7 697 aa13.02□□□□□ -0.33
LSG1-202ENST00000427461 ZNF219Q9P2Y4 722 aaPredicted RBP13.02□□□□□ -0.33
LSG1-202ENST00000427461 MCOLN1Q9GZU1 580 aa13.01□□□□□ -0.33
LSG1-202ENST00000427461 ADAMTS7Q9UKP4 1686 aa13□□□□□ -0.33
LSG1-202ENST00000427461 CRKLP46109 303 aaKnown RBP13□□□□□ -0.33
LSG1-202ENST00000427461 C2CD5Q86YS7 1000 aa13□□□□□ -0.33
LSG1-202ENST00000427461 IFNL2Q8IZJ0 200 aa13□□□□□ -0.33
LSG1-202ENST00000427461 TAF1DQ9H5J8 278 aaPredicted RBP13□□□□□ -0.33
LSG1-202ENST00000427461 FER1L6Q2WGJ9 1857 aa12.99□□□□□ -0.33
LSG1-202ENST00000427461 FLT4P35916 1363 aa12.99□□□□□ -0.33
LSG1-202ENST00000427461 EAPPQ56P03 285 aaPredicted RBP12.99□□□□□ -0.33
LSG1-202ENST00000427461 USPL1Q5W0Q7 1092 aa12.99□□□□□ -0.33
LSG1-202ENST00000427461 NRXN2Q9P2S2 1712 aa12.99□□□□□ -0.33
LSG1-202ENST00000427461 NCAPD2Q15021 1401 aa12.98□□□□□ -0.33
LSG1-202ENST00000427461 CARMIL3Q8ND23 1372 aa12.98□□□□□ -0.33
LSG1-202ENST00000427461 FYB1O15117 783 aa12.98□□□□□ -0.33
LSG1-202ENST00000427461 C21orf2O43822 256 aa12.98□□□□□ -0.33
LSG1-202ENST00000427461 PTCD1O75127 700 aaKnown RBP12.98□□□□□ -0.33
LSG1-202ENST00000427461 ABT1Q9ULW3 272 aaKnown RBP12.98□□□□□ -0.33
LSG1-202ENST00000427461 CASP8AP2Q9UKL3 1982 aa12.98□□□□□ -0.33
LSG1-202ENST00000427461 SCN4AP35499 1836 aa12.97□□□□□ -0.33
LSG1-202ENST00000427461 GRM1Q13255 1194 aa12.97□□□□□ -0.33
LSG1-202ENST00000427461 NFIXQ14938 502 aa12.97□□□□□ -0.33
LSG1-202ENST00000427461 MAP1SQ66K74 1059 aaPredicted RBP12.97□□□□□ -0.33
LSG1-202ENST00000427461 CLEC11AQ9Y240 323 aa12.97□□□□□ -0.33
LSG1-202ENST00000427461 THSD7BQ9C0I4 1608 aa12.96□□□□□ -0.33
LSG1-202ENST00000427461 IQCA1LA6NCM1 817 aa12.96□□□□□ -0.33
LSG1-202ENST00000427461 H0YIN7 160 aa12.96□□□□□ -0.33
LSG1-202ENST00000427461 BEGAINQ9BUH8 593 aa12.96□□□□□ -0.33
LSG1-202ENST00000427461 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.96□□□□□ -0.33
LSG1-202ENST00000427461 EMILIN1Q9Y6C2 1016 aa12.96□□□□□ -0.33
LSG1-202ENST00000427461 ADAMTSL1Q8N6G6 1762 aa12.96□□□□□ -0.34
LSG1-202ENST00000427461 TJP1Q07157 1748 aa12.96□□□□□ -0.34
LSG1-202ENST00000427461 LTBP1Q14766 1721 aa12.96□□□□□ -0.34
LSG1-202ENST00000427461 ZPR1O75312 459 aa12.95□□□□□ -0.34
LSG1-202ENST00000427461 SERPINB2P05120 415 aa12.95□□□□□ -0.34
LSG1-202ENST00000427461 FMR1Q06787 632 aaKnown RBP eCLIP12.95□□□□□ -0.34
LSG1-202ENST00000427461 CYP4F22Q6NT55 531 aa12.95□□□□□ -0.34
LSG1-202ENST00000427461 INTS5Q6P9B9 1019 aaKnown RBP12.95□□□□□ -0.34
LSG1-202ENST00000427461 PAXIP1Q6ZW49 1069 aaPredicted RBP12.95□□□□□ -0.34
LSG1-202ENST00000427461 CNTROBQ8N137 903 aa12.95□□□□□ -0.34
LSG1-202ENST00000427461 ZNF622Q969S3 477 aaKnown RBP eCLIP12.95□□□□□ -0.347e-7■■■□□ 14.8
LSG1-202ENST00000427461 CAPNS2Q96L46 248 aa12.95□□□□□ -0.34
LSG1-202ENST00000427461 EYA1Q99502 592 aa12.95□□□□□ -0.34
LSG1-202ENST00000427461 TONSLQ96HA7 1378 aa12.94□□□□□ -0.34
LSG1-202ENST00000427461 DGKZQ13574 1117 aa12.94□□□□□ -0.34
LSG1-202ENST00000427461 GPR101Q96P66 508 aaPredicted RBP12.94□□□□□ -0.34
LSG1-202ENST00000427461 ANKRD31Q8N7Z5 1873 aa12.93□□□□□ -0.34
LSG1-202ENST00000427461 ERVV-2B6SEH9 535 aa12.93□□□□□ -0.34
LSG1-202ENST00000427461 PPM1GO15355 546 aaPredicted RBP12.93□□□□□ -0.34
LSG1-202ENST00000427461 SOX10P56693 466 aa12.93□□□□□ -0.34
LSG1-202ENST00000427461 L3MBTL3Q96JM7 780 aaPredicted RBP12.93□□□□□ -0.34
LSG1-202ENST00000427461 TAOK3Q9H2K8 898 aa12.93□□□□□ -0.34
LSG1-202ENST00000427461 COL11A2P13942 1736 aaPredicted RBP12.93□□□□□ -0.34
LSG1-202ENST00000427461 CACNA1SQ13698 1873 aa12.93□□□□□ -0.34
LSG1-202ENST00000427461 AOC2O75106 756 aa12.92□□□□□ -0.34
LSG1-202ENST00000427461 MAPK8IP2Q13387 824 aaPredicted RBP12.92□□□□□ -0.34
LSG1-202ENST00000427461 PRPF38BQ5VTL8 546 aaKnown RBP12.92□□□□□ -0.34
LSG1-202ENST00000427461 CCDC24Q8N4L8 307 aa12.92□□□□□ -0.34
LSG1-202ENST00000427461 PUS7Q96PZ0 661 aaKnown RBP12.92□□□□□ -0.34
LSG1-202ENST00000427461 SIN3AQ96ST3 1273 aa12.92□□□□□ -0.34
LSG1-202ENST00000427461 CARD11Q9BXL7 1154 aa12.92□□□□□ -0.34
LSG1-202ENST00000427461 BCL2L12Q9HB09 334 aa12.92□□□□□ -0.34
LSG1-202ENST00000427461 KIF24Q5T7B8 1368 aa12.92□□□□□ -0.34
LSG1-202ENST00000427461 LTBP3Q9NS15 1303 aa12.91□□□□□ -0.34
LSG1-202ENST00000427461 EPHX2P34913 555 aa12.91□□□□□ -0.34
LSG1-202ENST00000427461 CABP4P57796 275 aa12.91□□□□□ -0.34
LSG1-202ENST00000427461 HACL1Q9UJ83 578 aa12.91□□□□□ -0.34
LSG1-202ENST00000427461 SOS1Q07889 1333 aaPredicted RBP12.9□□□□□ -0.34
LSG1-202ENST00000427461 ZNF541Q9H0D2 1346 aa12.9□□□□□ -0.34
LSG1-202ENST00000427461 SLX4Q8IY92 1834 aa12.9□□□□□ -0.34
LSG1-202ENST00000427461 BICDL1Q6ZP65 573 aa12.9□□□□□ -0.34
LSG1-202ENST00000427461 DDX21Q9NR30 783 aaKnown RBP eCLIP12.9□□□□□ -0.34
LSG1-202ENST00000427461 NARFQ9UHQ1 456 aa12.9□□□□□ -0.34
LSG1-202ENST00000427461 KIF20BQ96Q89 1820 aa12.9□□□□□ -0.34
LSG1-202ENST00000427461 RNF123Q5XPI4 1314 aa12.89□□□□□ -0.35
LSG1-202ENST00000427461 ECE1P42892 770 aa12.89□□□□□ -0.35
LSG1-202ENST00000427461 DNAJC10Q8IXB1 793 aa12.89□□□□□ -0.35
LSG1-202ENST00000427461 NFATC2IPQ8NCF5 419 aa12.88□□□□□ -0.35
LSG1-202ENST00000427461 COL15A1P39059 1388 aa12.87□□□□□ -0.35
LSG1-202ENST00000427461 NEUROD1Q13562 356 aa12.87□□□□□ -0.35
LSG1-202ENST00000427461 CST9Q5W186 159 aa12.87□□□□□ -0.35
LSG1-202ENST00000427461 PNMA8AQ86V59 439 aaPredicted RBP12.86□□□□□ -0.35
LSG1-202ENST00000427461 TESK2Q96S53 571 aa12.86□□□□□ -0.35
LSG1-202ENST00000427461 WASHC2AQ641Q2 1341 aa12.86□□□□□ -0.35
LSG1-202ENST00000427461 ANKRD26Q9UPS8 1709 aa12.85□□□□□ -0.35
LSG1-202ENST00000427461 TRPM7Q96QT4 1865 aa12.85□□□□□ -0.35
LSG1-202ENST00000427461 TRAF5O00463 557 aa12.85□□□□□ -0.35
LSG1-202ENST00000427461 HSP90AB1P08238 724 aaKnown RBP12.85□□□□□ -0.35
LSG1-202ENST00000427461 MAP2K2P36507 400 aa12.85□□□□□ -0.35
LSG1-202ENST00000427461 PRPF40BQ6NWY9 871 aaKnown RBP12.85□□□□□ -0.35
LSG1-202ENST00000427461 ZBTB1Q9Y2K1 713 aa12.85□□□□□ -0.35
LSG1-202ENST00000427461 CYP19A1P11511 503 aaPredicted RBP12.84□□□□□ -0.35
LSG1-202ENST00000427461 PDE6BP35913 854 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms