RNA–Protein interactions for RNA: ENST00000427259.1

LINC00476-203, long intergenic non-protein coding RNA 476, humanhuman

TSL 2

Gene LINC00476, Length 893 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-203ENST00000427259 NLGN1Q8N2Q7 840 aa17.67■□□□□ 0.42
LINC00476-203ENST00000427259 GAS2L2Q8NHY3 880 aa17.67■□□□□ 0.42
LINC00476-203ENST00000427259 U3KPZ7 1027 aaPredicted RBP17.67■□□□□ 0.42
LINC00476-203ENST00000427259 U2AF1L5P0DN76 240 aaPredicted RBP17.66■□□□□ 0.42
LINC00476-203ENST00000427259 U2AF1Q01081 240 aaKnown RBP eCLIP17.66■□□□□ 0.42
LINC00476-203ENST00000427259 ZNF496Q96IT1 587 aaPredicted RBP17.66■□□□□ 0.42
LINC00476-203ENST00000427259 NRXN2Q9P2S2 1712 aa17.65■□□□□ 0.42
LINC00476-203ENST00000427259 KCNA4P22459 653 aa17.65■□□□□ 0.42
LINC00476-203ENST00000427259 COL15A1P39059 1388 aa17.65■□□□□ 0.42
LINC00476-203ENST00000427259 SCN7AQ01118 1682 aa17.64■□□□□ 0.42
LINC00476-203ENST00000427259 A0A0G2JLW4 131 aa17.64■□□□□ 0.41
LINC00476-203ENST00000427259 GRIN3BO60391 1043 aa17.64■□□□□ 0.41
LINC00476-203ENST00000427259 USPL1Q5W0Q7 1092 aa17.64■□□□□ 0.41
LINC00476-203ENST00000427259 BCL2L12Q9HB09 334 aa17.64■□□□□ 0.41
LINC00476-203ENST00000427259 HEG1Q9ULI3 1381 aa17.64■□□□□ 0.41
LINC00476-203ENST00000427259 TEFQ10587 303 aa17.63■□□□□ 0.41
LINC00476-203ENST00000427259 DCTN1Q14203 1278 aa17.63■□□□□ 0.41
LINC00476-203ENST00000427259 ZNF790Q6PG37 636 aa17.63■□□□□ 0.41
LINC00476-203ENST00000427259 MCM10Q7L590 875 aa17.63■□□□□ 0.41
LINC00476-203ENST00000427259 VSIG10Q8N0Z9 540 aa17.63■□□□□ 0.41
LINC00476-203ENST00000427259 ARFGEF1Q9Y6D6 1849 aa17.63■□□□□ 0.41
LINC00476-203ENST00000427259 DPEP1P16444 411 aa17.62■□□□□ 0.41
LINC00476-203ENST00000427259 CANXP27824 592 aaKnown RBP17.62■□□□□ 0.41
LINC00476-203ENST00000427259 NUDCQ9Y266 331 aa17.62■□□□□ 0.41
LINC00476-203ENST00000427259 PARP3Q9Y6F1 533 aa17.62■□□□□ 0.41
LINC00476-203ENST00000427259 PRAMEF22A3QJZ6 481 aa17.61■□□□□ 0.41
LINC00476-203ENST00000427259 POLRMTO00411 1230 aaKnown RBP17.61■□□□□ 0.41
LINC00476-203ENST00000427259 KCNA3P22001 575 aa17.61■□□□□ 0.41
LINC00476-203ENST00000427259 TM4SF1P30408 202 aa17.61■□□□□ 0.41
LINC00476-203ENST00000427259 TTC5Q8N0Z6 440 aa17.61■□□□□ 0.41
LINC00476-203ENST00000427259 ADCY9O60503 1353 aa17.61■□□□□ 0.41
LINC00476-203ENST00000427259 ATP10DQ9P241 1426 aa17.61■□□□□ 0.41
LINC00476-203ENST00000427259 BCORQ6W2J9 1755 aa17.61■□□□□ 0.41
LINC00476-203ENST00000427259 FCHSD2O94868 740 aa17.6■□□□□ 0.41
LINC00476-203ENST00000427259 NARFQ9UHQ1 456 aa17.6■□□□□ 0.41
LINC00476-203ENST00000427259 ANKRD31Q8N7Z5 1873 aa17.59■□□□□ 0.41
LINC00476-203ENST00000427259 KDM3BQ7LBC6 1761 aa17.59■□□□□ 0.41
LINC00476-203ENST00000427259 DLEC1Q9Y238 1755 aa17.59■□□□□ 0.41
LINC00476-203ENST00000427259 NFIXQ14938 502 aa17.59■□□□□ 0.41
LINC00476-203ENST00000427259 BTBD11A6QL63 1104 aa17.58■□□□□ 0.4
LINC00476-203ENST00000427259 ZPR1O75312 459 aa17.58■□□□□ 0.4
LINC00476-203ENST00000427259 PIP4K2AP48426 406 aaPredicted RBP17.58■□□□□ 0.4
LINC00476-203ENST00000427259 EIF5P55010 431 aaKnown RBP17.58■□□□□ 0.4
LINC00476-203ENST00000427259 TGFB2P61812 414 aa17.58■□□□□ 0.4
LINC00476-203ENST00000427259 CARMIL3Q8ND23 1372 aa17.57■□□□□ 0.4
LINC00476-203ENST00000427259 A1BGP04217 495 aa17.57■□□□□ 0.4
LINC00476-203ENST00000427259 CHRNA5P30532 468 aa17.57■□□□□ 0.4
LINC00476-203ENST00000427259 PLEKHF1Q96S99 279 aa17.57■□□□□ 0.4
LINC00476-203ENST00000427259 BCS1LQ9Y276 419 aa17.57■□□□□ 0.4
LINC00476-203ENST00000427259 LAMB4A4D0S4 1761 aa17.57■□□□□ 0.4
LINC00476-203ENST00000427259 ZEB1P37275 1124 aaPredicted RBP17.56■□□□□ 0.4
LINC00476-203ENST00000427259 DDX10Q13206 875 aaKnown RBP17.56■□□□□ 0.4
LINC00476-203ENST00000427259 FMNL2Q96PY5 1086 aa17.56■□□□□ 0.4
LINC00476-203ENST00000427259 USP16Q9Y5T5 823 aa17.56■□□□□ 0.4
LINC00476-203ENST00000427259 COL11A2P13942 1736 aaPredicted RBP17.55■□□□□ 0.4
LINC00476-203ENST00000427259 MIS18AQ9NYP9 233 aa17.55■□□□□ 0.4
LINC00476-203ENST00000427259 STARD3NLO95772 234 aa17.54■□□□□ 0.4
LINC00476-203ENST00000427259 THUMPD2Q9BTF0 503 aaKnown RBP17.54■□□□□ 0.4
LINC00476-203ENST00000427259 TBC1D2BQ9UPU7 963 aa17.54■□□□□ 0.4
LINC00476-203ENST00000427259 ZNF330Q9Y3S2 320 aaPredicted RBP17.54■□□□□ 0.4
LINC00476-203ENST00000427259 SBF1O95248 1867 aa17.54■□□□□ 0.4
LINC00476-203ENST00000427259 TBC1D9BQ66K14 1250 aa17.53■□□□□ 0.4
LINC00476-203ENST00000427259 BICDL1Q6ZP65 573 aa17.53■□□□□ 0.4
LINC00476-203ENST00000427259 ZNF526Q8TF50 670 aaPredicted RBP17.53■□□□□ 0.4
LINC00476-203ENST00000427259 RTF1Q92541 710 aaKnown RBP17.53■□□□□ 0.4
LINC00476-203ENST00000427259 C1QTNF8P60827 252 aa17.52■□□□□ 0.4
LINC00476-203ENST00000427259 SERPINB2P05120 415 aa17.51■□□□□ 0.39
LINC00476-203ENST00000427259 IL6STP40189 918 aaPredicted RBP17.51■□□□□ 0.39
LINC00476-203ENST00000427259 CACNA1SQ13698 1873 aa17.51■□□□□ 0.39
LINC00476-203ENST00000427259 CCDC24Q8N4L8 307 aa17.51■□□□□ 0.39
LINC00476-203ENST00000427259 NBPF26B4DH59 902 aa17.5■□□□□ 0.39
LINC00476-203ENST00000427259 HTATSF1O43719 755 aaKnown RBP17.5■□□□□ 0.39
LINC00476-203ENST00000427259 GIGYF1O75420 1035 aaPredicted RBP17.5■□□□□ 0.39
LINC00476-203ENST00000427259 CAMTA2O94983 1202 aa17.5■□□□□ 0.39
LINC00476-203ENST00000427259 NBPF10Q6P3W6 841 aaKnown RBP17.5■□□□□ 0.39
LINC00476-203ENST00000427259 NBPF15Q8N660 670 aa17.5■□□□□ 0.39
LINC00476-203ENST00000427259 TEX13AQ9BXU3 409 aaPredicted RBP17.5■□□□□ 0.39
LINC00476-203ENST00000427259 ARHGAP27Q6ZUM4 889 aa17.49■□□□□ 0.39
LINC00476-203ENST00000427259 PIM2Q9P1W9 311 aa17.49■□□□□ 0.39
LINC00476-203ENST00000427259 CCDC88AQ3V6T2 1871 aa17.48■□□□□ 0.39
LINC00476-203ENST00000427259 TAF7Q15545 349 aaPredicted RBP17.48■□□□□ 0.39
LINC00476-203ENST00000427259 NFE2L2Q16236 605 aa17.48■□□□□ 0.39
LINC00476-203ENST00000427259 A0A087WZG4 1122 aa17.47■□□□□ 0.39
LINC00476-203ENST00000427259 SNRPA1P09661 255 aaKnown RBP17.47■□□□□ 0.39
LINC00476-203ENST00000427259 RALBP1Q15311 655 aa17.47■□□□□ 0.39
LINC00476-203ENST00000427259 DALRD3Q5D0E6 543 aaKnown RBP17.47■□□□□ 0.39
LINC00476-203ENST00000427259 DZIP3Q86Y13 1208 aaKnown RBP17.46■□□□□ 0.39
LINC00476-203ENST00000427259 GPBP1L1Q9HC44 474 aaPredicted RBP17.46■□□□□ 0.39
LINC00476-203ENST00000427259 PRR5LQ6MZQ0 368 aa17.45■□□□□ 0.38
LINC00476-203ENST00000427259 MYBBP1AQ9BQG0 1328 aaKnown RBP17.45■□□□□ 0.38
LINC00476-203ENST00000427259 NUP98P52948 1817 aa17.44■□□□□ 0.38
LINC00476-203ENST00000427259 PRELPP51888 382 aa17.44■□□□□ 0.38
LINC00476-203ENST00000427259 C2CD5Q86YS7 1000 aa17.44■□□□□ 0.38
LINC00476-203ENST00000427259 SPINK5Q9NQ38 1064 aaPredicted RBP17.44■□□□□ 0.38
LINC00476-203ENST00000427259 MAPK8IP3Q9UPT6 1336 aa17.44■□□□□ 0.38
LINC00476-203ENST00000427259 ARFGEF2Q9Y6D5 1785 aa17.43■□□□□ 0.38
LINC00476-203ENST00000427259 SLX4Q8IY92 1834 aa17.43■□□□□ 0.38
LINC00476-203ENST00000427259 SENP3-EIF4A1A0A087X0R7 540 aa17.43■□□□□ 0.38
LINC00476-203ENST00000427259 EIF4A1P60842 406 aaKnown RBP17.43■□□□□ 0.38
LINC00476-203ENST00000427259 RASSF7Q02833 373 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms