RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 CANXP27824 592 aaKnown RBP14.26□□□□□ -0.13
LINC01238-202ENST00000426962 FKBP8Q14318 412 aa14.26□□□□□ -0.13
LINC01238-202ENST00000426962 NARFQ9UHQ1 456 aa14.26□□□□□ -0.13
LINC01238-202ENST00000426962 UTRNP46939 3433 aa14.25□□□□□ -0.13
LINC01238-202ENST00000426962 YBX3P16989 372 aaKnown RBP eCLIP14.25□□□□□ -0.13
LINC01238-202ENST00000426962 TGFB2P61812 414 aa14.25□□□□□ -0.13
LINC01238-202ENST00000426962 NFE2L2Q16236 605 aa14.25□□□□□ -0.13
LINC01238-202ENST00000426962 USPL1Q5W0Q7 1092 aa14.25□□□□□ -0.13
LINC01238-202ENST00000426962 MAPK8IP3Q9UPT6 1336 aa14.24□□□□□ -0.13
LINC01238-202ENST00000426962 A0A087WZG4 1122 aa14.24□□□□□ -0.13
LINC01238-202ENST00000426962 TM4SF1P30408 202 aa14.24□□□□□ -0.13
LINC01238-202ENST00000426962 EIF5P55010 431 aaKnown RBP14.24□□□□□ -0.13
LINC01238-202ENST00000426962 COL15A1P39059 1388 aa14.23□□□□□ -0.13
LINC01238-202ENST00000426962 SNRPA1P09661 255 aaKnown RBP14.23□□□□□ -0.13
LINC01238-202ENST00000426962 PNISRQ8TF01 805 aaKnown RBP14.23□□□□□ -0.13
LINC01238-202ENST00000426962 PRKRIP1Q9H875 184 aaPredicted RBP14.23□□□□□ -0.13
LINC01238-202ENST00000426962 USP16Q9Y5T5 823 aa14.23□□□□□ -0.13
LINC01238-202ENST00000426962 UBR2Q8IWV8 1755 aa14.22□□□□□ -0.13
LINC01238-202ENST00000426962 A1BGP04217 495 aa14.22□□□□□ -0.13
LINC01238-202ENST00000426962 IL6STP40189 918 aaPredicted RBP14.22□□□□□ -0.13
LINC01238-202ENST00000426962 NPM2Q86SE8 214 aaKnown RBP14.22□□□□□ -0.13
LINC01238-202ENST00000426962 MIS18AQ9NYP9 233 aa14.22□□□□□ -0.13
LINC01238-202ENST00000426962 SIPA1L3O60292 1781 aaPredicted RBP14.22□□□□□ -0.13
LINC01238-202ENST00000426962 A0A0G2JLW4 131 aa14.21□□□□□ -0.13
LINC01238-202ENST00000426962 POLRMTO00411 1230 aaKnown RBP14.21□□□□□ -0.13
LINC01238-202ENST00000426962 DDR1Q08345 913 aa14.21□□□□□ -0.13
LINC01238-202ENST00000426962 BCL2L12Q9HB09 334 aa14.21□□□□□ -0.13
LINC01238-202ENST00000426962 GOLGB1Q14789 3259 aaKnown RBP14.2□□□□□ -0.14
LINC01238-202ENST00000426962 RIPK4P57078 832 aa14.2□□□□□ -0.14
LINC01238-202ENST00000426962 NFIXQ14938 502 aa14.2□□□□□ -0.14
LINC01238-202ENST00000426962 ZNF330Q9Y3S2 320 aaPredicted RBP14.2□□□□□ -0.14
LINC01238-202ENST00000426962 C4AP0C0L4 1744 aa14.19□□□□□ -0.14
LINC01238-202ENST00000426962 PRAMEF22A3QJZ6 481 aa14.19□□□□□ -0.14
LINC01238-202ENST00000426962 DPEP1P16444 411 aa14.19□□□□□ -0.14
LINC01238-202ENST00000426962 TMPOP42166 694 aaKnown RBP14.19□□□□□ -0.14
LINC01238-202ENST00000426962 WDR43Q15061 677 aaKnown RBP eCLIP14.19□□□□□ -0.14
LINC01238-202ENST00000426962 WWC3Q9ULE0 1092 aa14.19□□□□□ -0.14
LINC01238-202ENST00000426962 TBC1D2BQ9UPU7 963 aa14.19□□□□□ -0.14
LINC01238-202ENST00000426962 C10orf71Q711Q0 1435 aa14.18□□□□□ -0.14
LINC01238-202ENST00000426962 SERPINB2P05120 415 aa14.18□□□□□ -0.14
LINC01238-202ENST00000426962 ZNF784Q8NCA9 323 aaPredicted RBP14.18□□□□□ -0.14
LINC01238-202ENST00000426962 RUNDC1Q96C34 613 aa14.18□□□□□ -0.14
LINC01238-202ENST00000426962 THUMPD2Q9BTF0 503 aaKnown RBP14.18□□□□□ -0.14
LINC01238-202ENST00000426962 ADAMTS8Q9UP79 889 aa14.18□□□□□ -0.14
LINC01238-202ENST00000426962 KCNA3P22001 575 aa14.17□□□□□ -0.14
LINC01238-202ENST00000426962 LMOD3Q0VAK6 560 aa14.17□□□□□ -0.14
LINC01238-202ENST00000426962 PXDNLA1KZ92 1463 aa14.17□□□□□ -0.14
LINC01238-202ENST00000426962 CHD4Q14839 1912 aa14.17□□□□□ -0.14
LINC01238-202ENST00000426962 ZNF316A6NFI3 1004 aaPredicted RBP14.16□□□□□ -0.14
LINC01238-202ENST00000426962 GIGYF1O75420 1035 aaPredicted RBP14.16□□□□□ -0.14
LINC01238-202ENST00000426962 EIF4A1P60842 406 aaKnown RBP14.16□□□□□ -0.14
LINC01238-202ENST00000426962 BICDL1Q6ZP65 573 aa14.16□□□□□ -0.14
LINC01238-202ENST00000426962 DZIP3Q86Y13 1208 aaKnown RBP14.16□□□□□ -0.14
LINC01238-202ENST00000426962 CCDC146Q8IYE0 955 aa14.16□□□□□ -0.14
LINC01238-202ENST00000426962 PIM2Q9P1W9 311 aa14.16□□□□□ -0.14
LINC01238-202ENST00000426962 BCS1LQ9Y276 419 aa14.16□□□□□ -0.14
LINC01238-202ENST00000426962 CAMTA2O94983 1202 aa14.15□□□□□ -0.14
LINC01238-202ENST00000426962 PIP4K2AP48426 406 aaPredicted RBP14.15□□□□□ -0.14
LINC01238-202ENST00000426962 NEUROD2Q15784 382 aa14.15□□□□□ -0.14
LINC01238-202ENST00000426962 TBC1D9BQ66K14 1250 aa14.15□□□□□ -0.14
LINC01238-202ENST00000426962 BABAM1Q9NWV8 329 aa14.15□□□□□ -0.14
LINC01238-202ENST00000426962 KIF13BQ9NQT8 1826 aa14.15□□□□□ -0.14
LINC01238-202ENST00000426962 NBPF26B4DH59 902 aa14.14□□□□□ -0.15
LINC01238-202ENST00000426962 NBPF10Q6P3W6 841 aaKnown RBP14.14□□□□□ -0.15
LINC01238-202ENST00000426962 CLEC4GQ6UXB4 293 aa14.14□□□□□ -0.15
LINC01238-202ENST00000426962 NBPF15Q8N660 670 aa14.14□□□□□ -0.15
LINC01238-202ENST00000426962 SETDB2Q96T68 719 aa14.14□□□□□ -0.15
LINC01238-202ENST00000426962 TSPYL4Q9UJ04 414 aa14.14□□□□□ -0.15
LINC01238-202ENST00000426962 RRP7AQ9Y3A4 280 aaKnown RBP14.14□□□□□ -0.15
LINC01238-202ENST00000426962 DLG5Q8TDM6 1919 aa14.13□□□□□ -0.15
LINC01238-202ENST00000426962 CHRNA5P30532 468 aa14.13□□□□□ -0.15
LINC01238-202ENST00000426962 DALRD3Q5D0E6 543 aaKnown RBP14.13□□□□□ -0.15
LINC01238-202ENST00000426962 TRIM35Q9UPQ4 493 aa14.12□□□□□ -0.15
LINC01238-202ENST00000426962 RGL2O15211 777 aa14.11□□□□□ -0.15
LINC01238-202ENST00000426962 ARHGAP27Q6ZUM4 889 aa14.11□□□□□ -0.15
LINC01238-202ENST00000426962 ZNF652Q9Y2D9 606 aa14.11□□□□□ -0.15
LINC01238-202ENST00000426962 N4BP2Q86UW6 1770 aaPredicted RBP14.11□□□□□ -0.15
LINC01238-202ENST00000426962 H0YIN7 160 aa14.1□□□□□ -0.15
LINC01238-202ENST00000426962 CHL1O00533 1208 aa14.1□□□□□ -0.15
LINC01238-202ENST00000426962 BRIP1Q9BX63 1249 aa14.1□□□□□ -0.15
LINC01238-202ENST00000426962 PDZRN3Q9UPQ7 1066 aa14.1□□□□□ -0.15
LINC01238-202ENST00000426962 KIAA1551Q9HCM1 1747 aa14.1□□□□□ -0.15
LINC01238-202ENST00000426962 CARMIL3Q8ND23 1372 aa14.09□□□□□ -0.15
LINC01238-202ENST00000426962 NPHP1O15259 732 aa14.09□□□□□ -0.15
LINC01238-202ENST00000426962 PDE6BP35913 854 aa14.09□□□□□ -0.15
LINC01238-202ENST00000426962 PRR5LQ6MZQ0 368 aa14.09□□□□□ -0.15
LINC01238-202ENST00000426962 C2CD5Q86YS7 1000 aa14.09□□□□□ -0.15
LINC01238-202ENST00000426962 NGEFQ8N5V2 710 aa14.09□□□□□ -0.15
LINC01238-202ENST00000426962 ERVV-1B6SEH8 477 aa14.08□□□□□ -0.16
LINC01238-202ENST00000426962 MYL6BP14649 208 aa14.08□□□□□ -0.16
LINC01238-202ENST00000426962 NRXN2Q9P2S2 1712 aa14.07□□□□□ -0.16
LINC01238-202ENST00000426962 KDM3BQ7LBC6 1761 aa14.07□□□□□ -0.16
LINC01238-202ENST00000426962 APAF1O14727 1248 aa14.07□□□□□ -0.16
LINC01238-202ENST00000426962 ANP32CO43423 234 aa14.07□□□□□ -0.16
LINC01238-202ENST00000426962 EIF2S2P20042 333 aaKnown RBP14.07□□□□□ -0.16
LINC01238-202ENST00000426962 ST5P78524 1137 aa14.07□□□□□ -0.16
LINC01238-202ENST00000426962 HLFQ16534 295 aa14.07□□□□□ -0.16
LINC01238-202ENST00000426962 TPTE2Q6XPS3 522 aa14.07□□□□□ -0.16
LINC01238-202ENST00000426962 NBPF5PQ86XG9 351 aaPredicted RBP14.07□□□□□ -0.16
LINC01238-202ENST00000426962 CCDC24Q8N4L8 307 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms