RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 SCAND2PQ9GZW5 306 aaPredicted RBP20.86■□□□□ 0.93
ARHGEF28-203ENST00000426542 IQCA1Q86XH1 822 aa20.85■□□□□ 0.93
ARHGEF28-203ENST00000426542 TIAM1Q13009 1591 aa20.85■□□□□ 0.93
ARHGEF28-203ENST00000426542 CUL5Q93034 780 aa20.85■□□□□ 0.93
ARHGEF28-203ENST00000426542 CRACR2AQ9BSW2 395 aa20.85■□□□□ 0.93
ARHGEF28-203ENST00000426542 KIF5CO60282 957 aa20.85■□□□□ 0.93
ARHGEF28-203ENST00000426542 TOP1P11387 765 aaKnown RBP20.85■□□□□ 0.93
ARHGEF28-203ENST00000426542 CCDC113Q9H0I3 377 aa20.85■□□□□ 0.93
ARHGEF28-203ENST00000426542 DNAAF4Q8WXU2 420 aa20.85■□□□□ 0.93
ARHGEF28-203ENST00000426542 GOLGA8AA7E2F4 631 aa20.84■□□□□ 0.93
ARHGEF28-203ENST00000426542 GOLGA8BA8MQT2 603 aa20.84■□□□□ 0.93
ARHGEF28-203ENST00000426542 TMEM266Q2M3C6 531 aa20.84■□□□□ 0.93
ARHGEF28-203ENST00000426542 CCDC178Q5BJE1 867 aa20.84■□□□□ 0.93
ARHGEF28-203ENST00000426542 CCDC97Q96F63 343 aaPredicted RBP20.84■□□□□ 0.93
ARHGEF28-203ENST00000426542 NLRP5P59047 1200 aa20.84■□□□□ 0.93
ARHGEF28-203ENST00000426542 POLA1P09884 1462 aaPredicted RBP20.84■□□□□ 0.93
ARHGEF28-203ENST00000426542 ANKRD18BA2A2Z9 1011 aa20.84■□□□□ 0.93
ARHGEF28-203ENST00000426542 PDCL2Q8N4E4 241 aa20.84■□□□□ 0.93
ARHGEF28-203ENST00000426542 DNAI2Q9GZS0 605 aa20.84■□□□□ 0.93
ARHGEF28-203ENST00000426542 CCT2P78371 535 aaKnown RBP20.84■□□□□ 0.93
ARHGEF28-203ENST00000426542 TMCO3Q6UWJ1 677 aa20.84■□□□□ 0.93
ARHGEF28-203ENST00000426542 IFIT3O14879 490 aaKnown RBP20.83■□□□□ 0.93
ARHGEF28-203ENST00000426542 NKTRP30414 1462 aaKnown RBP20.83■□□□□ 0.93
ARHGEF28-203ENST00000426542 DYDC1Q8WWB3 177 aa20.83■□□□□ 0.92
ARHGEF28-203ENST00000426542 RAB34Q9BZG1 259 aa20.83■□□□□ 0.92
ARHGEF28-203ENST00000426542 GBP3Q9H0R5 595 aa20.83■□□□□ 0.92
ARHGEF28-203ENST00000426542 ANAPC15P60006 121 aa20.83■□□□□ 0.92
ARHGEF28-203ENST00000426542 C20orf194Q5TEA3 1177 aa20.83■□□□□ 0.92
ARHGEF28-203ENST00000426542 RPGRQ92834 1020 aaKnown RBP20.83■□□□□ 0.92
ARHGEF28-203ENST00000426542 LARP6Q9BRS8 491 aaKnown RBP20.83■□□□□ 0.92
ARHGEF28-203ENST00000426542 CLIP2Q9UDT6 1046 aa20.82■□□□□ 0.92
ARHGEF28-203ENST00000426542 PLEKHH1Q9ULM0 1364 aa20.82■□□□□ 0.92
ARHGEF28-203ENST00000426542 DNA2P51530 1060 aa20.82■□□□□ 0.92
ARHGEF28-203ENST00000426542 VPS36Q86VN1 386 aa20.82■□□□□ 0.92
ARHGEF28-203ENST00000426542 NUP88Q99567 741 aaPredicted RBP20.82■□□□□ 0.92
ARHGEF28-203ENST00000426542 CCDC91Q7Z6B0 441 aa20.82■□□□□ 0.92
ARHGEF28-203ENST00000426542 ZSCAN30Q86W11 494 aa20.82■□□□□ 0.92
ARHGEF28-203ENST00000426542 CNNM3Q8NE01 707 aa20.82■□□□□ 0.92
ARHGEF28-203ENST00000426542 EMILIN1Q9Y6C2 1016 aa20.82■□□□□ 0.92
ARHGEF28-203ENST00000426542 KIF2AO00139 706 aaPredicted RBP20.82■□□□□ 0.92
ARHGEF28-203ENST00000426542 HYPKQ9NX55 129 aa20.82■□□□□ 0.92
ARHGEF28-203ENST00000426542 ABCC11Q96J66 1382 aa20.82■□□□□ 0.92
ARHGEF28-203ENST00000426542 FGFR1OPO95684 399 aaKnown RBP20.81■□□□□ 0.92
ARHGEF28-203ENST00000426542 KIF4BQ2VIQ3 1234 aa20.81■□□□□ 0.92
ARHGEF28-203ENST00000426542 RNF41Q9H4P4 317 aaPredicted RBP20.81■□□□□ 0.92
ARHGEF28-203ENST00000426542 CCDC194A0A1B0GVG4 234 aa20.81■□□□□ 0.92
ARHGEF28-203ENST00000426542 HMGB2P26583 209 aaKnown RBP20.81■□□□□ 0.92
ARHGEF28-203ENST00000426542 TMX1Q9H3N1 280 aa20.81■□□□□ 0.92
ARHGEF28-203ENST00000426542 EPRSP07814 1512 aaKnown RBP20.81■□□□□ 0.92
ARHGEF28-203ENST00000426542 GOPCQ9HD26 462 aa20.81■□□□□ 0.92
ARHGEF28-203ENST00000426542 LIMCH1Q9UPQ0 1083 aa20.81■□□□□ 0.92
ARHGEF28-203ENST00000426542 URI1O94763 535 aaPredicted RBP20.81■□□□□ 0.92
ARHGEF28-203ENST00000426542 NESP48681 1621 aa20.81■□□□□ 0.92
ARHGEF28-203ENST00000426542 MAP2K1Q02750 393 aaPredicted RBP20.81■□□□□ 0.92
ARHGEF28-203ENST00000426542 CPLX3Q8WVH0 158 aa20.81■□□□□ 0.92
ARHGEF28-203ENST00000426542 SKAP1Q86WV1 359 aa20.81■□□□□ 0.92
ARHGEF28-203ENST00000426542 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.81■□□□□ 0.92
ARHGEF28-203ENST00000426542 CATIPQ7Z7H3 387 aa20.8■□□□□ 0.92
ARHGEF28-203ENST00000426542 CKAP2LQ8IYA6 745 aa20.8■□□□□ 0.92
ARHGEF28-203ENST00000426542 ZNF219Q9P2Y4 722 aaPredicted RBP20.8■□□□□ 0.92
ARHGEF28-203ENST00000426542 CDK13Q14004 1512 aaKnown RBP20.8■□□□□ 0.92
ARHGEF28-203ENST00000426542 A0A087WZG4 1122 aa20.8■□□□□ 0.92
ARHGEF28-203ENST00000426542 ADAMTS2O95450 1211 aa20.8■□□□□ 0.92
ARHGEF28-203ENST00000426542 SSFA2P28290 1259 aa20.8■□□□□ 0.92
ARHGEF28-203ENST00000426542 LUZP1Q86V48 1076 aa20.8■□□□□ 0.92
ARHGEF28-203ENST00000426542 GPTP24298 496 aa20.8■□□□□ 0.92
ARHGEF28-203ENST00000426542 CTNNBL1Q8WYA6 563 aaPredicted RBP20.79■□□□□ 0.92
ARHGEF28-203ENST00000426542 LIG1P18858 919 aa20.79■□□□□ 0.92
ARHGEF28-203ENST00000426542 CCDC144CPQ8IYA2 1237 aa20.79■□□□□ 0.92
ARHGEF28-203ENST00000426542 CCDC141Q6ZP82 1450 aa20.79■□□□□ 0.92
ARHGEF28-203ENST00000426542 TDRD12Q587J7 1177 aaKnown RBP20.79■□□□□ 0.92
ARHGEF28-203ENST00000426542 WDR78Q5VTH9 848 aa20.78■□□□□ 0.92
ARHGEF28-203ENST00000426542 SLF2Q8IX21 1173 aa20.78■□□□□ 0.92
ARHGEF28-203ENST00000426542 FSIP1Q8NA03 581 aa20.78■□□□□ 0.92
ARHGEF28-203ENST00000426542 CCDC150Q8NCX0 1101 aa20.78■□□□□ 0.92
ARHGEF28-203ENST00000426542 KIF18AQ8NI77 898 aa20.78■□□□□ 0.92
ARHGEF28-203ENST00000426542 EHMT1Q9H9B1 1298 aa20.78■□□□□ 0.92
ARHGEF28-203ENST00000426542 CTAGE5O15320 804 aa20.78■□□□□ 0.92
ARHGEF28-203ENST00000426542 MAP9Q49MG5 647 aa20.78■□□□□ 0.92
ARHGEF28-203ENST00000426542 MAP3K2Q9Y2U5 619 aa20.78■□□□□ 0.92
ARHGEF28-203ENST00000426542 EVI5LQ96CN4 794 aa20.78■□□□□ 0.92
ARHGEF28-203ENST00000426542 ZBTB3Q9H5J0 574 aa20.78■□□□□ 0.92
ARHGEF28-203ENST00000426542 DBF4Q9UBU7 674 aaPredicted RBP20.78■□□□□ 0.92
ARHGEF28-203ENST00000426542 GSTTP1A0A1W2PQM5 241 aa20.77■□□□□ 0.92
ARHGEF28-203ENST00000426542 TTLL12Q14166 644 aaPredicted RBP20.77■□□□□ 0.92
ARHGEF28-203ENST00000426542 IFFO1Q0D2I5 559 aa20.77■□□□□ 0.92
ARHGEF28-203ENST00000426542 PRKCSHP14314 528 aaPredicted RBP20.77■□□□□ 0.91
ARHGEF28-203ENST00000426542 GJB2P29033 226 aa20.77■□□□□ 0.91
ARHGEF28-203ENST00000426542 USP8P40818 1118 aa20.77■□□□□ 0.91
ARHGEF28-203ENST00000426542 SHTN1A0MZ66 631 aa20.76■□□□□ 0.91
ARHGEF28-203ENST00000426542 GOLIM4O00461 696 aa20.76■□□□□ 0.91
ARHGEF28-203ENST00000426542 USO1O60763 962 aaKnown RBP20.76■□□□□ 0.91
ARHGEF28-203ENST00000426542 YEATS4O95619 227 aa20.76■□□□□ 0.91
ARHGEF28-203ENST00000426542 INCENPQ9NQS7 918 aa20.76■□□□□ 0.91
ARHGEF28-203ENST00000426542 BAG4O95429 457 aaKnown RBP20.76■□□□□ 0.91
ARHGEF28-203ENST00000426542 TNNT1P13805 278 aa20.76■□□□□ 0.91
ARHGEF28-203ENST00000426542 PHF8Q9UPP1 1060 aa20.76■□□□□ 0.91
ARHGEF28-203ENST00000426542 PTPRCP08575 1304 aa20.76■□□□□ 0.91
ARHGEF28-203ENST00000426542 TRMT1Q9NXH9 659 aaKnown RBP20.75■□□□□ 0.91
ARHGEF28-203ENST00000426542 MACROD2A1Z1Q3 448 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms