RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 ZNF468Q5VIY5 522 aaPredicted RBP6.8□□□□□ -1.32
R3HDM1-205ENST00000425804 KRTAP4-2Q9BYR5 136 aa6.8□□□□□ -1.32
R3HDM1-205ENST00000425804 PCDHB11Q9Y5F2 797 aa6.8□□□□□ -1.32
R3HDM1-205ENST00000425804 MAPTP10636 758 aaKnown RBP6.79□□□□□ -1.32
R3HDM1-205ENST00000425804 PLCB2Q00722 1185 aa6.79□□□□□ -1.32
R3HDM1-205ENST00000425804 TRIM28Q13263 835 aaKnown RBP6.79□□□□□ -1.32
R3HDM1-205ENST00000425804 ELOA3CA0A087WX78 387 aaPredicted RBP6.78□□□□□ -1.32
R3HDM1-205ENST00000425804 ELOA3DA6NLF2 546 aaPredicted RBP6.78□□□□□ -1.32
R3HDM1-205ENST00000425804 TNP2Q05952 138 aa6.78□□□□□ -1.32
R3HDM1-205ENST00000425804 FZD5Q13467 585 aa6.78□□□□□ -1.32
R3HDM1-205ENST00000425804 COL9A3Q14050 684 aaPredicted RBP6.78□□□□□ -1.32
R3HDM1-205ENST00000425804 ELOA3BQ3SY89 546 aa6.78□□□□□ -1.32
R3HDM1-205ENST00000425804 ELOA3Q8NG57 546 aa6.78□□□□□ -1.32
R3HDM1-205ENST00000425804 XAGE2Q96GT9 111 aa6.78□□□□□ -1.32
R3HDM1-205ENST00000425804 ADGRE1Q14246 886 aa6.77□□□□□ -1.33
R3HDM1-205ENST00000425804 NLRP8Q86W28 1048 aa6.77□□□□□ -1.33
R3HDM1-205ENST00000425804 RHBDD1Q8TEB9 315 aa6.77□□□□□ -1.33
R3HDM1-205ENST00000425804 AK7Q96M32 723 aa6.77□□□□□ -1.33
R3HDM1-205ENST00000425804 PRR12Q9ULL5 1215 aa6.77□□□□□ -1.33
R3HDM1-205ENST00000425804 ZBBXA8MT70 800 aa6.76□□□□□ -1.33
R3HDM1-205ENST00000425804 KHNYNO15037 678 aaKnown RBP6.76□□□□□ -1.33
R3HDM1-205ENST00000425804 ALAS2P22557 587 aa6.76□□□□□ -1.33
R3HDM1-205ENST00000425804 MBTPS1Q14703 1052 aa6.76□□□□□ -1.33
R3HDM1-205ENST00000425804 TBC1D9Q6ZT07 1266 aa6.76□□□□□ -1.33
R3HDM1-205ENST00000425804 C9orf172C9J069 976 aa6.75□□□□□ -1.33
R3HDM1-205ENST00000425804 M0R082 166 aa6.75□□□□□ -1.33
R3HDM1-205ENST00000425804 USP17L8P0C7I0 530 aa6.75□□□□□ -1.33
R3HDM1-205ENST00000425804 ATP4AP20648 1035 aa6.75□□□□□ -1.33
R3HDM1-205ENST00000425804 PDE4DQ08499 809 aa6.75□□□□□ -1.33
R3HDM1-205ENST00000425804 ZNF417Q8TAU3 575 aa6.75□□□□□ -1.33
R3HDM1-205ENST00000425804 TP53INP1Q96A56 240 aa6.75□□□□□ -1.33
R3HDM1-205ENST00000425804 ZNF587Q96SQ5 575 aaPredicted RBP6.75□□□□□ -1.33
R3HDM1-205ENST00000425804 RNF112Q9ULX5 631 aa6.75□□□□□ -1.33
R3HDM1-205ENST00000425804 FBXO45P0C2W1 286 aa6.74□□□□□ -1.33
R3HDM1-205ENST00000425804 PLA2G4AP47712 749 aa6.74□□□□□ -1.33
R3HDM1-205ENST00000425804 TXNRD3Q86VQ6 643 aa6.74□□□□□ -1.33
R3HDM1-205ENST00000425804 PPARGC1BQ86YN6 1023 aaKnown RBP6.74□□□□□ -1.33
R3HDM1-205ENST00000425804 MDFIQ99750 246 aa6.74□□□□□ -1.33
R3HDM1-205ENST00000425804 C8orf86Q6ZUL3 223 aa6.73□□□□□ -1.33
R3HDM1-205ENST00000425804 PRDM6Q9NQX0 595 aa6.73□□□□□ -1.33
R3HDM1-205ENST00000425804 SELPP16109 830 aa6.72□□□□□ -1.33
R3HDM1-205ENST00000425804 PROCA1Q8NCQ7 364 aaPredicted RBP6.72□□□□□ -1.33
R3HDM1-205ENST00000425804 C1orf216Q8TAB5 229 aa6.72□□□□□ -1.33
R3HDM1-205ENST00000425804 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.72□□□□□ -1.33
R3HDM1-205ENST00000425804 A0A1W2PNR3 127 aa6.71□□□□□ -1.34
R3HDM1-205ENST00000425804 NID1P14543 1247 aa6.71□□□□□ -1.34
R3HDM1-205ENST00000425804 ESCO1Q5FWF5 840 aa6.71□□□□□ -1.34
R3HDM1-205ENST00000425804 SYT9Q86SS6 491 aa6.71□□□□□ -1.34
R3HDM1-205ENST00000425804 TRIM34Q9BYJ4 488 aa6.71□□□□□ -1.34
R3HDM1-205ENST00000425804 STRN4Q9NRL3 753 aa6.71□□□□□ -1.34
R3HDM1-205ENST00000425804 PCMTD2Q9NV79 361 aa6.71□□□□□ -1.34
R3HDM1-205ENST00000425804 STARD13Q9Y3M8 1113 aa6.71□□□□□ -1.34
R3HDM1-205ENST00000425804 ALBP02768 609 aa6.7□□□□□ -1.34
R3HDM1-205ENST00000425804 FAM157BP0CG42 384 aa6.7□□□□□ -1.34
R3HDM1-205ENST00000425804 IRAK1P51617 712 aa6.7□□□□□ -1.34
R3HDM1-205ENST00000425804 TLR1Q15399 786 aa6.7□□□□□ -1.34
R3HDM1-205ENST00000425804 MICALL1Q8N3F8 863 aa6.7□□□□□ -1.34
R3HDM1-205ENST00000425804 MYCP01106 439 aaPredicted RBP6.69□□□□□ -1.34
R3HDM1-205ENST00000425804 SKIV2LQ15477 1246 aaKnown RBP6.69□□□□□ -1.34
R3HDM1-205ENST00000425804 ARSJQ5FYB0 599 aaPredicted RBP6.69□□□□□ -1.34
R3HDM1-205ENST00000425804 AIDAQ96BJ3 306 aa6.69□□□□□ -1.34
R3HDM1-205ENST00000425804 SSBP4Q9BWG4 385 aaPredicted RBP6.69□□□□□ -1.34
R3HDM1-205ENST00000425804 MARK1Q9P0L2 795 aa6.69□□□□□ -1.34
R3HDM1-205ENST00000425804 ADARB2-AS1A8MUL3 147 aa6.68□□□□□ -1.34
R3HDM1-205ENST00000425804 STAU1O95793 577 aaKnown RBP6.68□□□□□ -1.34
R3HDM1-205ENST00000425804 HAP1P54257 671 aaPredicted RBP6.68□□□□□ -1.34
R3HDM1-205ENST00000425804 SHISA2Q6UWI4 295 aa6.68□□□□□ -1.34
R3HDM1-205ENST00000425804 LENG1Q96BZ8 264 aaPredicted RBP6.68□□□□□ -1.34
R3HDM1-205ENST00000425804 ATP1B4Q9UN42 357 aaPredicted RBP6.68□□□□□ -1.34
R3HDM1-205ENST00000425804 RNF114Q9Y508 228 aa6.68□□□□□ -1.34
R3HDM1-205ENST00000425804 TAL1P17542 331 aaPredicted RBP6.67□□□□□ -1.34
R3HDM1-205ENST00000425804 MCCD1P59942 119 aaPredicted RBP6.67□□□□□ -1.34
R3HDM1-205ENST00000425804 NRG1Q02297 640 aaPredicted RBP6.67□□□□□ -1.34
R3HDM1-205ENST00000425804 LAMC2Q13753 1193 aa6.67□□□□□ -1.34
R3HDM1-205ENST00000425804 TRAPPC3LQ5T215 181 aa6.67□□□□□ -1.34
R3HDM1-205ENST00000425804 CDCA7Q9BWT1 371 aaPredicted RBP6.67□□□□□ -1.34
R3HDM1-205ENST00000425804 ETNK1Q9HBU6 452 aa6.67□□□□□ -1.34
R3HDM1-205ENST00000425804 EFSO43281 561 aa6.66□□□□□ -1.34
R3HDM1-205ENST00000425804 SIN3BO75182 1162 aa6.66□□□□□ -1.34
R3HDM1-205ENST00000425804 A0A0A0MRY4 1105 aa6.65□□□□□ -1.34
R3HDM1-205ENST00000425804 SSTR4P31391 388 aa6.64□□□□□ -1.35
R3HDM1-205ENST00000425804 SH3D19Q5HYK7 790 aa6.64□□□□□ -1.35
R3HDM1-205ENST00000425804 TNFRSF25Q93038 417 aa6.64□□□□□ -1.35
R3HDM1-205ENST00000425804 ZIC5Q96T25 663 aa6.64□□□□□ -1.35
R3HDM1-205ENST00000425804 NIFKQ9BYG3 293 aaKnown RBP6.64□□□□□ -1.35
R3HDM1-205ENST00000425804 GJA3Q9Y6H8 435 aa6.64□□□□□ -1.35
R3HDM1-205ENST00000425804 NBPF1Q3BBV0 1214 aa6.63□□□□□ -1.35
R3HDM1-205ENST00000425804 SAMD5Q5TGI4 173 aa6.63□□□□□ -1.35
R3HDM1-205ENST00000425804 C20orf204Q6ZNR8 217 aa6.63□□□□□ -1.35
R3HDM1-205ENST00000425804 ZNF592Q92610 1267 aa6.63□□□□□ -1.35
R3HDM1-205ENST00000425804 CCDC85AQ96PX6 553 aaPredicted RBP6.63□□□□□ -1.35
R3HDM1-205ENST00000425804 USP21Q9UK80 565 aa6.63□□□□□ -1.35
R3HDM1-205ENST00000425804 ADH7P40394 386 aa6.62□□□□□ -1.35
R3HDM1-205ENST00000425804 NR1H3Q13133 447 aa6.62□□□□□ -1.35
R3HDM1-205ENST00000425804 TATP17735 454 aaPredicted RBP6.61□□□□□ -1.35
R3HDM1-205ENST00000425804 RAC1P63000 192 aa6.61□□□□□ -1.35
R3HDM1-205ENST00000425804 OAS3Q9Y6K5 1087 aaKnown RBP6.61□□□□□ -1.35
R3HDM1-205ENST00000425804 CD97P48960 835 aa6.6□□□□□ -1.35
R3HDM1-205ENST00000425804 LILRB5O75023 590 aa6.59□□□□□ -1.35
R3HDM1-205ENST00000425804 RFC5P40937 340 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms