RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 TNS2Q63HR2 1409 aa9.4□□□□□ -0.9
CHCHD3P1-201ENST00000425516 CYP27B1O15528 508 aa9.4□□□□□ -0.9
CHCHD3P1-201ENST00000425516 SLC34A2O95436 690 aa9.4□□□□□ -0.9
CHCHD3P1-201ENST00000425516 PRKAR2BP31323 418 aa9.4□□□□□ -0.9
CHCHD3P1-201ENST00000425516 AMOTQ4VCS5 1084 aa9.4□□□□□ -0.9
CHCHD3P1-201ENST00000425516 PPP1R15BQ5SWA1 713 aa9.4□□□□□ -0.9
CHCHD3P1-201ENST00000425516 ILDR2Q71H61 639 aa9.4□□□□□ -0.9
CHCHD3P1-201ENST00000425516 LARP6Q9BRS8 491 aaKnown RBP9.4□□□□□ -0.9
CHCHD3P1-201ENST00000425516 LRRC37A3O60309 1634 aa9.4□□□□□ -0.9
CHCHD3P1-201ENST00000425516 WDR43Q15061 677 aaKnown RBP eCLIP9.39□□□□□ -0.91
CHCHD3P1-201ENST00000425516 MTHFSDQ2M296 383 aaKnown RBP9.39□□□□□ -0.91
CHCHD3P1-201ENST00000425516 PLEKHO1Q53GL0 409 aaPredicted RBP9.39□□□□□ -0.91
CHCHD3P1-201ENST00000425516 KRT27Q7Z3Y8 459 aa9.39□□□□□ -0.91
CHCHD3P1-201ENST00000425516 SPRYD3Q8NCJ5 442 aa9.39□□□□□ -0.91
CHCHD3P1-201ENST00000425516 UPF1Q92900 1129 aaKnown RBP eCLIP9.39□□□□□ -0.91
CHCHD3P1-201ENST00000425516 PLSCR2Q9NRY7 297 aa9.39□□□□□ -0.91
CHCHD3P1-201ENST00000425516 SPG7Q9UQ90 795 aa9.39□□□□□ -0.91
CHCHD3P1-201ENST00000425516 PKD1L3Q7Z443 1732 aa9.39□□□□□ -0.91
CHCHD3P1-201ENST00000425516 SHANK3Q9BYB0 1731 aa9.39□□□□□ -0.91
CHCHD3P1-201ENST00000425516 BCL9O00512 1426 aa9.39□□□□□ -0.91
CHCHD3P1-201ENST00000425516 BRWD3Q6RI45 1802 aa9.38□□□□□ -0.91
CHCHD3P1-201ENST00000425516 PHKG2P15735 406 aa9.38□□□□□ -0.91
CHCHD3P1-201ENST00000425516 PDE3BQ13370 1112 aa9.38□□□□□ -0.91
CHCHD3P1-201ENST00000425516 PNNQ9H307 717 aaKnown RBP9.38□□□□□ -0.91
CHCHD3P1-201ENST00000425516 PCDH11XQ9BZA7 1347 aa9.37□□□□□ -0.91
CHCHD3P1-201ENST00000425516 PCDH11YQ9BZA8 1340 aa9.37□□□□□ -0.91
CHCHD3P1-201ENST00000425516 A0A0G2JS52 829 aa9.37□□□□□ -0.91
CHCHD3P1-201ENST00000425516 MYT1Q01538 1121 aa9.37□□□□□ -0.91
CHCHD3P1-201ENST00000425516 MFSD10Q14728 455 aa9.37□□□□□ -0.91
CHCHD3P1-201ENST00000425516 FAM182BQ5T319 152 aa9.37□□□□□ -0.91
CHCHD3P1-201ENST00000425516 IFNL2Q8IZJ0 200 aa9.37□□□□□ -0.91
CHCHD3P1-201ENST00000425516 DDX54Q8TDD1 881 aaKnown RBP9.37□□□□□ -0.91
CHCHD3P1-201ENST00000425516 PTCD2Q8WV60 388 aaKnown RBP9.37□□□□□ -0.91
CHCHD3P1-201ENST00000425516 RUNDC1Q96C34 613 aa9.37□□□□□ -0.91
CHCHD3P1-201ENST00000425516 NFE2L2Q16236 605 aa9.36□□□□□ -0.91
CHCHD3P1-201ENST00000425516 AKAP4Q5JQC9 854 aa9.36□□□□□ -0.91
CHCHD3P1-201ENST00000425516 ZNF530Q6P9A1 599 aaPredicted RBP9.36□□□□□ -0.91
CHCHD3P1-201ENST00000425516 CCDC146Q8IYE0 955 aa9.36□□□□□ -0.91
CHCHD3P1-201ENST00000425516 LHX6Q9UPM6 363 aa9.36□□□□□ -0.91
CHCHD3P1-201ENST00000425516 PDE4AP27815 886 aa9.35□□□□□ -0.91
CHCHD3P1-201ENST00000425516 TMPOP42166 694 aaKnown RBP9.35□□□□□ -0.91
CHCHD3P1-201ENST00000425516 FAM196AQ6ZSG2 479 aa9.35□□□□□ -0.91
CHCHD3P1-201ENST00000425516 FAM9BQ8IZU0 186 aa9.35□□□□□ -0.91
CHCHD3P1-201ENST00000425516 GAS2L2Q8NHY3 880 aa9.35□□□□□ -0.91
CHCHD3P1-201ENST00000425516 EMILIN3Q9NT22 766 aa9.35□□□□□ -0.91
CHCHD3P1-201ENST00000425516 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.35□□□□□ -0.91
CHCHD3P1-201ENST00000425516 EP400Q96L91 3159 aa9.34□□□□□ -0.91
CHCHD3P1-201ENST00000425516 KDM6AO15550 1401 aaPredicted RBP9.34□□□□□ -0.91
CHCHD3P1-201ENST00000425516 POTEEQ6S8J3 1075 aa9.34□□□□□ -0.91
CHCHD3P1-201ENST00000425516 IL17REQ8NFR9 667 aa9.34□□□□□ -0.91
CHCHD3P1-201ENST00000425516 OXER1Q8TDS5 423 aa9.34□□□□□ -0.91
CHCHD3P1-201ENST00000425516 DDX27Q96GQ7 796 aaKnown RBP9.34□□□□□ -0.91
CHCHD3P1-201ENST00000425516 DCAF5Q96JK2 942 aa9.34□□□□□ -0.91
CHCHD3P1-201ENST00000425516 LGR6Q9HBX8 967 aa9.34□□□□□ -0.91
CHCHD3P1-201ENST00000425516 PCDH10Q9P2E7 1040 aa9.34□□□□□ -0.91
CHCHD3P1-201ENST00000425516 ADAMTS7Q9UKP4 1686 aa9.33□□□□□ -0.92
CHCHD3P1-201ENST00000425516 GNAT3A8MTJ3 354 aa9.33□□□□□ -0.92
CHCHD3P1-201ENST00000425516 APAF1O14727 1248 aa9.33□□□□□ -0.92
CHCHD3P1-201ENST00000425516 RNMTO43148 476 aaKnown RBP9.33□□□□□ -0.92
CHCHD3P1-201ENST00000425516 HTATSF1O43719 755 aaKnown RBP9.33□□□□□ -0.92
CHCHD3P1-201ENST00000425516 HSP90AB1P08238 724 aaKnown RBP9.33□□□□□ -0.92
CHCHD3P1-201ENST00000425516 C1orf141Q5JVX7 400 aa9.33□□□□□ -0.92
CHCHD3P1-201ENST00000425516 MPRIPQ6WCQ1 1025 aa9.33□□□□□ -0.92
CHCHD3P1-201ENST00000425516 PTF1AQ7RTS3 328 aa9.33□□□□□ -0.92
CHCHD3P1-201ENST00000425516 MAP3K5Q99683 1374 aa9.33□□□□□ -0.92
CHCHD3P1-201ENST00000425516 MAPK8IP3Q9UPT6 1336 aa9.32□□□□□ -0.92
CHCHD3P1-201ENST00000425516 ERVV-2B6SEH9 535 aa9.32□□□□□ -0.92
CHCHD3P1-201ENST00000425516 KCNQ2O43526 872 aa9.32□□□□□ -0.92
CHCHD3P1-201ENST00000425516 NEFMP07197 916 aa9.32□□□□□ -0.92
CHCHD3P1-201ENST00000425516 RIPK4P57078 832 aa9.32□□□□□ -0.92
CHCHD3P1-201ENST00000425516 CEMIPQ8WUJ3 1361 aa9.32□□□□□ -0.92
CHCHD3P1-201ENST00000425516 TOGARAM1Q9Y4F4 1720 aa9.31□□□□□ -0.92
CHCHD3P1-201ENST00000425516 PRIM1P49642 420 aaKnown RBP9.31□□□□□ -0.92
CHCHD3P1-201ENST00000425516 DCTN1Q14203 1278 aa9.31□□□□□ -0.92
CHCHD3P1-201ENST00000425516 ACSBG1Q96GR2 724 aa9.31□□□□□ -0.92
CHCHD3P1-201ENST00000425516 RRP7AQ9Y3A4 280 aaKnown RBP9.31□□□□□ -0.92
CHCHD3P1-201ENST00000425516 SBF2Q86WG5 1849 aa9.31□□□□□ -0.92
CHCHD3P1-201ENST00000425516 TRIM37O94972 964 aa9.3□□□□□ -0.92
CHCHD3P1-201ENST00000425516 CCDC27Q2M243 656 aa9.3□□□□□ -0.92
CHCHD3P1-201ENST00000425516 MCM10Q7L590 875 aa9.3□□□□□ -0.92
CHCHD3P1-201ENST00000425516 PIGBQ92521 554 aa9.3□□□□□ -0.92
CHCHD3P1-201ENST00000425516 SCN11AQ9UI33 1791 aa9.29□□□□□ -0.92
CHCHD3P1-201ENST00000425516 DLG5Q8TDM6 1919 aa9.29□□□□□ -0.92
CHCHD3P1-201ENST00000425516 MRC1P22897 1456 aa9.29□□□□□ -0.92
CHCHD3P1-201ENST00000425516 NEUROD2Q15784 382 aa9.29□□□□□ -0.92
CHCHD3P1-201ENST00000425516 ZNF687Q8N1G0 1237 aa9.29□□□□□ -0.92
CHCHD3P1-201ENST00000425516 NGEFQ8N5V2 710 aa9.29□□□□□ -0.92
CHCHD3P1-201ENST00000425516 NFATC2IPQ8NCF5 419 aa9.29□□□□□ -0.92
CHCHD3P1-201ENST00000425516 RTF1Q92541 710 aaKnown RBP9.29□□□□□ -0.92
CHCHD3P1-201ENST00000425516 SLC52A2Q9HAB3 445 aa9.29□□□□□ -0.92
CHCHD3P1-201ENST00000425516 TSHZ2Q9NRE2 1034 aa9.29□□□□□ -0.92
CHCHD3P1-201ENST00000425516 NHSQ6T4R5 1651 aa9.29□□□□□ -0.92
CHCHD3P1-201ENST00000425516 SENP3-EIF4A1A0A087X0R7 540 aa9.28□□□□□ -0.92
CHCHD3P1-201ENST00000425516 PLSCR1O15162 318 aa9.28□□□□□ -0.92
CHCHD3P1-201ENST00000425516 CCDC125Q86Z20 511 aa9.28□□□□□ -0.92
CHCHD3P1-201ENST00000425516 WWC1Q8IX03 1113 aa9.28□□□□□ -0.92
CHCHD3P1-201ENST00000425516 THUMPD2Q9BTF0 503 aaKnown RBP9.28□□□□□ -0.92
CHCHD3P1-201ENST00000425516 ZNF521Q96K83 1311 aa9.28□□□□□ -0.92
CHCHD3P1-201ENST00000425516 DOT1LQ8TEK3 1739 aa9.28□□□□□ -0.92
CHCHD3P1-201ENST00000425516 ITGB4P16144 1822 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms