RNA–Protein interactions for RNA: ENST00000424751.2

LINC00839-201, long intergenic non-protein coding RNA 839, humanhuman

TSL 2

Gene LINC00839, Length 2,252 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-201ENST00000424751 PDIA6Q15084 440 aa17.92■□□□□ 0.46
LINC00839-201ENST00000424751 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.92■□□□□ 0.46
LINC00839-201ENST00000424751 NGLY1Q96IV0 654 aa17.91■□□□□ 0.46
LINC00839-201ENST00000424751 API5Q9BZZ5 524 aaKnown RBP17.91■□□□□ 0.46
LINC00839-201ENST00000424751 ASAP1Q9ULH1 1129 aa17.91■□□□□ 0.46
LINC00839-201ENST00000424751 BCL9LQ86UU0 1499 aa17.91■□□□□ 0.46
LINC00839-201ENST00000424751 MYL6BP14649 208 aa17.9■□□□□ 0.46
LINC00839-201ENST00000424751 CACNA1FO60840 1977 aa17.9■□□□□ 0.46
LINC00839-201ENST00000424751 BECN1Q14457 450 aa17.89■□□□□ 0.46
LINC00839-201ENST00000424751 NKX1-1Q15270 411 aaPredicted RBP17.89■□□□□ 0.46
LINC00839-201ENST00000424751 INTS3Q68E01 1043 aaKnown RBP17.89■□□□□ 0.46
LINC00839-201ENST00000424751 JCADQ9P266 1359 aa17.89■□□□□ 0.45
LINC00839-201ENST00000424751 AIMP1Q12904 312 aaKnown RBP17.89■□□□□ 0.45
LINC00839-201ENST00000424751 FAM182BQ5T319 152 aa17.89■□□□□ 0.45
LINC00839-201ENST00000424751 FAM43AQ8N2R8 423 aa17.89■□□□□ 0.45
LINC00839-201ENST00000424751 PIGBQ92521 554 aa17.89■□□□□ 0.45
LINC00839-201ENST00000424751 FAM98CQ17RN3 349 aaKnown RBP17.88■□□□□ 0.45
LINC00839-201ENST00000424751 ACSBG1Q96GR2 724 aa17.88■□□□□ 0.45
LINC00839-201ENST00000424751 SPATA31A5Q5VU36 1347 aa17.88■□□□□ 0.45
LINC00839-201ENST00000424751 SPATA31A7Q8IWB4 1347 aa17.88■□□□□ 0.45
LINC00839-201ENST00000424751 PTPRCP08575 1304 aa17.88■□□□□ 0.45
LINC00839-201ENST00000424751 A0A0G2JS52 829 aa17.87■□□□□ 0.45
LINC00839-201ENST00000424751 MARCH10Q8NA82 808 aaPredicted RBP17.87■□□□□ 0.45
LINC00839-201ENST00000424751 ADCY9O60503 1353 aa17.87■□□□□ 0.45
LINC00839-201ENST00000424751 KCPQ6ZWJ8 1503 aa17.87■□□□□ 0.45
LINC00839-201ENST00000424751 PI4KAP2A4QPH2 592 aa17.87■□□□□ 0.45
LINC00839-201ENST00000424751 PTF1AQ7RTS3 328 aa17.87■□□□□ 0.45
LINC00839-201ENST00000424751 PI4KAP1Q8N8J0 262 aa17.87■□□□□ 0.45
LINC00839-201ENST00000424751 SYTL4Q96C24 671 aaPredicted RBP17.87■□□□□ 0.45
LINC00839-201ENST00000424751 UBR2Q8IWV8 1755 aa17.86■□□□□ 0.45
LINC00839-201ENST00000424751 PDZRN3Q9UPQ7 1066 aa17.86■□□□□ 0.45
LINC00839-201ENST00000424751 NWD2Q9ULI1 1742 aa17.86■□□□□ 0.45
LINC00839-201ENST00000424751 PAPPAQ13219 1627 aa17.86■□□□□ 0.45
LINC00839-201ENST00000424751 EXOC5O00471 708 aa17.86■□□□□ 0.45
LINC00839-201ENST00000424751 HSP90AB1P08238 724 aaKnown RBP17.86■□□□□ 0.45
LINC00839-201ENST00000424751 TTC5Q8N0Z6 440 aa17.86■□□□□ 0.45
LINC00839-201ENST00000424751 DOT1LQ8TEK3 1739 aa17.85■□□□□ 0.45
LINC00839-201ENST00000424751 UNC5CLQ8IV45 518 aa17.85■□□□□ 0.45
LINC00839-201ENST00000424751 SLC4A9Q96Q91 983 aa17.84■□□□□ 0.45
LINC00839-201ENST00000424751 NBPF26B4DH59 902 aa17.84■□□□□ 0.45
LINC00839-201ENST00000424751 ERVV-2B6SEH9 535 aa17.84■□□□□ 0.45
LINC00839-201ENST00000424751 A1BGP04217 495 aa17.84■□□□□ 0.45
LINC00839-201ENST00000424751 PRIM1P49642 420 aaKnown RBP17.84■□□□□ 0.45
LINC00839-201ENST00000424751 NBPF14Q5TI25 921 aa17.84■□□□□ 0.45
LINC00839-201ENST00000424751 NBPF10Q6P3W6 841 aaKnown RBP17.84■□□□□ 0.45
LINC00839-201ENST00000424751 LRP10Q7Z4F1 713 aa17.84■□□□□ 0.45
LINC00839-201ENST00000424751 NBPF15Q8N660 670 aa17.84■□□□□ 0.45
LINC00839-201ENST00000424751 ATP10DQ9P241 1426 aa17.84■□□□□ 0.45
LINC00839-201ENST00000424751 AAMPQ13685 434 aa17.83■□□□□ 0.45
LINC00839-201ENST00000424751 KCNQ2O43526 872 aa17.83■□□□□ 0.44
LINC00839-201ENST00000424751 FMNL2Q96PY5 1086 aa17.83■□□□□ 0.44
LINC00839-201ENST00000424751 ATG3Q9NT62 314 aa17.83■□□□□ 0.44
LINC00839-201ENST00000424751 TMOD3Q9NYL9 352 aa17.83■□□□□ 0.44
LINC00839-201ENST00000424751 TNS2Q63HR2 1409 aa17.83■□□□□ 0.44
LINC00839-201ENST00000424751 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.82■□□□□ 0.44
LINC00839-201ENST00000424751 HOXB7P09629 217 aa17.82■□□□□ 0.44
LINC00839-201ENST00000424751 CWF19L2Q2TBE0 894 aaKnown RBP17.82■□□□□ 0.44
LINC00839-201ENST00000424751 DBF4Q9UBU7 674 aaPredicted RBP17.82■□□□□ 0.44
LINC00839-201ENST00000424751 DDB1Q16531 1140 aa17.82■□□□□ 0.44
LINC00839-201ENST00000424751 XAGE3Q8WTP9 111 aa17.82■□□□□ 0.44
LINC00839-201ENST00000424751 JARID2Q92833 1246 aaPredicted RBP17.82■□□□□ 0.44
LINC00839-201ENST00000424751 MAP3K2Q9Y2U5 619 aa17.82■□□□□ 0.44
LINC00839-201ENST00000424751 SNRPA1P09661 255 aaKnown RBP17.81■□□□□ 0.44
LINC00839-201ENST00000424751 USP21Q9UK80 565 aa17.81■□□□□ 0.44
LINC00839-201ENST00000424751 COPS6Q7L5N1 327 aa17.81■□□□□ 0.44
LINC00839-201ENST00000424751 USP44Q9H0E7 712 aa17.81■□□□□ 0.44
LINC00839-201ENST00000424751 RWDD1Q9H446 243 aaPredicted RBP17.81■□□□□ 0.44
LINC00839-201ENST00000424751 NBPF7P0C2Y1 421 aaPredicted RBP17.8■□□□□ 0.44
LINC00839-201ENST00000424751 L1TD1Q5T7N2 865 aaKnown RBP17.8■□□□□ 0.44
LINC00839-201ENST00000424751 UPF2Q9HAU5 1272 aaKnown RBP17.8■□□□□ 0.44
LINC00839-201ENST00000424751 KCNQ4P56696 695 aa17.79■□□□□ 0.44
LINC00839-201ENST00000424751 HDAC1Q13547 482 aaPredicted RBP17.79■□□□□ 0.44
LINC00839-201ENST00000424751 BEND3Q5T5X7 828 aa17.79■□□□□ 0.44
LINC00839-201ENST00000424751 CEP85Q6P2H3 762 aa17.79■□□□□ 0.44
LINC00839-201ENST00000424751 FNBP4Q8N3X1 1017 aaPredicted RBP17.79■□□□□ 0.44
LINC00839-201ENST00000424751 RBM42Q9BTD8 480 aaKnown RBP17.79■□□□□ 0.44
LINC00839-201ENST00000424751 DDX21Q9NR30 783 aaKnown RBP eCLIP17.79■□□□□ 0.44
LINC00839-201ENST00000424751 PLEKHG2Q9H7P9 1386 aa17.79■□□□□ 0.44
LINC00839-201ENST00000424751 N4BP2Q86UW6 1770 aaPredicted RBP17.79■□□□□ 0.44
LINC00839-201ENST00000424751 APBB1O00213 710 aa17.79■□□□□ 0.44
LINC00839-201ENST00000424751 DNAJC10Q8IXB1 793 aa17.79■□□□□ 0.44
LINC00839-201ENST00000424751 DNAAF4Q8WXU2 420 aa17.79■□□□□ 0.44
LINC00839-201ENST00000424751 LAMB4A4D0S4 1761 aa17.79■□□□□ 0.44
LINC00839-201ENST00000424751 TTLL7Q6ZT98 887 aa17.78■□□□□ 0.44
LINC00839-201ENST00000424751 SOS1Q07889 1333 aaPredicted RBP17.78■□□□□ 0.44
LINC00839-201ENST00000424751 MEX3CQ5U5Q3 659 aaKnown RBP17.78■□□□□ 0.44
LINC00839-201ENST00000424751 BCL9O00512 1426 aa17.78■□□□□ 0.44
LINC00839-201ENST00000424751 AFF2P51816 1311 aa17.78■□□□□ 0.44
LINC00839-201ENST00000424751 PNMA6EA0A0J9YXQ4 647 aa17.77■□□□□ 0.44
LINC00839-201ENST00000424751 EIF5BO60841 1220 aaKnown RBP17.77■□□□□ 0.44
LINC00839-201ENST00000424751 LNPKQ9C0E8 428 aa17.77■□□□□ 0.44
LINC00839-201ENST00000424751 LRRFIP2Q9Y608 721 aaKnown RBP17.77■□□□□ 0.44
LINC00839-201ENST00000424751 CCT4P50991 539 aaKnown RBP17.77■□□□□ 0.43
LINC00839-201ENST00000424751 VPS72Q15906 364 aa17.77■□□□□ 0.43
LINC00839-201ENST00000424751 SMC5Q8IY18 1101 aa17.76■□□□□ 0.43
LINC00839-201ENST00000424751 ZNF330Q9Y3S2 320 aaPredicted RBP17.76■□□□□ 0.43
LINC00839-201ENST00000424751 SMARCA5O60264 1052 aaPredicted RBP17.75■□□□□ 0.43
LINC00839-201ENST00000424751 IGKV5-2P06315 115 aa17.75■□□□□ 0.43
LINC00839-201ENST00000424751 UBE2Q2Q8WVN8 375 aa17.75■□□□□ 0.43
LINC00839-201ENST00000424751 SPATA31A6Q5VVP1 1343 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms