RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 IRS1P35568 1242 aa5.82□□□□□ -1.48
SF3B1-205ENST00000424674 KANK3Q6NY19 840 aa5.82□□□□□ -1.48
SF3B1-205ENST00000424674 FIGNL1Q6PIW4 674 aa5.82□□□□□ -1.48
SF3B1-205ENST00000424674 ZNF295-AS1Q8N0V1 137 aa5.82□□□□□ -1.48
SF3B1-205ENST00000424674 DEPDC4Q8N2C3 294 aa5.82□□□□□ -1.48
SF3B1-205ENST00000424674 NEDD1Q8NHV4 660 aa5.82□□□□□ -1.48
SF3B1-205ENST00000424674 ADAMTS19Q8TE59 1207 aa5.82□□□□□ -1.48
SF3B1-205ENST00000424674 AIDAQ96BJ3 306 aa5.82□□□□□ -1.48
SF3B1-205ENST00000424674 ABHD17AQ96GS6 310 aa5.82□□□□□ -1.48
SF3B1-205ENST00000424674 OXCT2Q9BYC2 517 aaPredicted RBP5.82□□□□□ -1.48
SF3B1-205ENST00000424674 C1orf115Q9H7X2 142 aa5.82□□□□□ -1.48
SF3B1-205ENST00000424674 LRRC4BQ9NT99 713 aa5.82□□□□□ -1.48
SF3B1-205ENST00000424674 OIP5O43482 229 aa5.81□□□□□ -1.48
SF3B1-205ENST00000424674 FGFR3P22607 806 aa5.81□□□□□ -1.48
SF3B1-205ENST00000424674 PODNQ7Z5L7 613 aa5.81□□□□□ -1.48
SF3B1-205ENST00000424674 TRIM50Q86XT4 487 aa5.81□□□□□ -1.48
SF3B1-205ENST00000424674 PLEKHM2Q8IWE5 1019 aa5.81□□□□□ -1.48
SF3B1-205ENST00000424674 KCTD17Q8N5Z5 321 aa5.81□□□□□ -1.48
SF3B1-205ENST00000424674 DNAAF2Q9NVR5 837 aaKnown RBP5.81□□□□□ -1.48
SF3B1-205ENST00000424674 ZNF358Q9NW07 568 aa5.81□□□□□ -1.48
SF3B1-205ENST00000424674 ZDHHC3Q9NYG2 299 aa5.81□□□□□ -1.48
SF3B1-205ENST00000424674 CABP1Q9NZU7 370 aa5.81□□□□□ -1.48
SF3B1-205ENST00000424674 USP3Q9Y6I4 520 aa5.81□□□□□ -1.48
SF3B1-205ENST00000424674 USP17L3A6NCW0 530 aa5.8□□□□□ -1.48
SF3B1-205ENST00000424674 USP17L4A6NCW7 530 aa5.8□□□□□ -1.48
SF3B1-205ENST00000424674 PHF20L1A8MW92 1017 aa5.8□□□□□ -1.48
SF3B1-205ENST00000424674 BNIP3LO60238 219 aa5.8□□□□□ -1.48
SF3B1-205ENST00000424674 BMP4P12644 408 aa5.8□□□□□ -1.48
SF3B1-205ENST00000424674 TATP17735 454 aaPredicted RBP5.8□□□□□ -1.48
SF3B1-205ENST00000424674 USP17L2Q6R6M4 530 aa5.8□□□□□ -1.48
SF3B1-205ENST00000424674 USP17L1Q7RTZ2 530 aa5.8□□□□□ -1.48
SF3B1-205ENST00000424674 NLRP8Q86W28 1048 aa5.8□□□□□ -1.48
SF3B1-205ENST00000424674 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.8□□□□□ -1.48
SF3B1-205ENST00000424674 KLRG1Q96E93 195 aa5.8□□□□□ -1.48
SF3B1-205ENST00000424674 UCN2Q96RP3 112 aa5.8□□□□□ -1.48
SF3B1-205ENST00000424674 NDFIP2Q9NV92 336 aa5.8□□□□□ -1.48
SF3B1-205ENST00000424674 GDF2Q9UK05 429 aaPredicted RBP5.8□□□□□ -1.48
SF3B1-205ENST00000424674 ATP1A2P50993 1020 aa5.79□□□□□ -1.48
SF3B1-205ENST00000424674 ARSJQ5FYB0 599 aaPredicted RBP5.79□□□□□ -1.48
SF3B1-205ENST00000424674 HDGFL1Q5TGJ6 251 aa5.79□□□□□ -1.48
SF3B1-205ENST00000424674 GOLGA6L1Q8N7Z2 621 aa5.79□□□□□ -1.48
SF3B1-205ENST00000424674 ZCCHC2Q9C0B9 1178 aaKnown RBP5.79□□□□□ -1.48
SF3B1-205ENST00000424674 SCHIP1Q9P0W5 487 aaPredicted RBP5.79□□□□□ -1.48
SF3B1-205ENST00000424674 PCDHGC4Q9Y5F7 938 aa5.79□□□□□ -1.48
SF3B1-205ENST00000424674 DNMT3AQ9Y6K1 912 aaPredicted RBP5.79□□□□□ -1.48
SF3B1-205ENST00000424674 A0A1W2PNR3 127 aa5.78□□□□□ -1.48
SF3B1-205ENST00000424674 DCDC2BA2VCK2 349 aa5.78□□□□□ -1.48
SF3B1-205ENST00000424674 ATXN7O15265 892 aaPredicted RBP5.78□□□□□ -1.48
SF3B1-205ENST00000424674 ATP9BO43861 1147 aa5.78□□□□□ -1.48
SF3B1-205ENST00000424674 IGSF3O75054 1194 aa5.78□□□□□ -1.48
SF3B1-205ENST00000424674 EPHA4P54764 986 aa5.78□□□□□ -1.48
SF3B1-205ENST00000424674 SLCO4C1Q6ZQN7 724 aa5.78□□□□□ -1.48
SF3B1-205ENST00000424674 PROSER2Q86WR7 435 aaPredicted RBP5.78□□□□□ -1.48
SF3B1-205ENST00000424674 TPCN2Q8NHX9 752 aa5.78□□□□□ -1.48
SF3B1-205ENST00000424674 KIAA1024Q9UPX6 916 aa5.78□□□□□ -1.48
SF3B1-205ENST00000424674 CNTNAP5Q8WYK1 1306 aa5.77□□□□□ -1.49
SF3B1-205ENST00000424674 SHISA8B8ZZ34 492 aa5.77□□□□□ -1.49
SF3B1-205ENST00000424674 FOXK2Q01167 660 aa5.77□□□□□ -1.49
SF3B1-205ENST00000424674 BICDL1Q6ZP65 573 aa5.77□□□□□ -1.49
SF3B1-205ENST00000424674 SLC9A9Q8IVB4 645 aa5.77□□□□□ -1.49
SF3B1-205ENST00000424674 BEND7Q8N7W2 519 aaPredicted RBP5.77□□□□□ -1.49
SF3B1-205ENST00000424674 GALNT6Q8NCL4 622 aa5.77□□□□□ -1.49
SF3B1-205ENST00000424674 PARP3Q9Y6F1 533 aa5.77□□□□□ -1.49
SF3B1-205ENST00000424674 GJA3Q9Y6H8 435 aa5.77□□□□□ -1.49
SF3B1-205ENST00000424674 C2CD2LO14523 706 aa5.76□□□□□ -1.49
SF3B1-205ENST00000424674 KHNYNO15037 678 aaKnown RBP5.76□□□□□ -1.49
SF3B1-205ENST00000424674 TXLNAP40222 546 aa5.76□□□□□ -1.49
SF3B1-205ENST00000424674 CLDN10P78369 228 aa5.76□□□□□ -1.49
SF3B1-205ENST00000424674 CTBSQ01459 385 aa5.76□□□□□ -1.49
SF3B1-205ENST00000424674 TEAD4Q15561 434 aa5.76□□□□□ -1.49
SF3B1-205ENST00000424674 SAMD5Q5TGI4 173 aa5.76□□□□□ -1.49
SF3B1-205ENST00000424674 CCDC102BQ68D86 513 aa5.76□□□□□ -1.49
SF3B1-205ENST00000424674 C1orf229Q6ZS94 237 aaPredicted RBP5.76□□□□□ -1.49
SF3B1-205ENST00000424674 TNS4Q8IZW8 715 aa5.76□□□□□ -1.49
SF3B1-205ENST00000424674 FNBP4Q8N3X1 1017 aaPredicted RBP5.76□□□□□ -1.49
SF3B1-205ENST00000424674 OGFOD1Q8N543 542 aa5.76□□□□□ -1.49
SF3B1-205ENST00000424674 ZDHHC1Q8WTX9 485 aa5.76□□□□□ -1.49
SF3B1-205ENST00000424674 EDARADDQ8WWZ3 215 aa5.76□□□□□ -1.49
SF3B1-205ENST00000424674 GLMNQ92990 594 aa5.76□□□□□ -1.49
SF3B1-205ENST00000424674 L3MBTL2Q969R5 705 aa5.76□□□□□ -1.49
SF3B1-205ENST00000424674 PUS7Q96PZ0 661 aaKnown RBP5.76□□□□□ -1.49
SF3B1-205ENST00000424674 ZIC5Q96T25 663 aa5.76□□□□□ -1.49
SF3B1-205ENST00000424674 GGA1Q9UJY5 639 aa5.76□□□□□ -1.49
SF3B1-205ENST00000424674 ARID3CA6NKF2 412 aa5.75□□□□□ -1.49
SF3B1-205ENST00000424674 FAM157BP0CG42 384 aa5.75□□□□□ -1.49
SF3B1-205ENST00000424674 ARAFP10398 606 aa5.75□□□□□ -1.49
SF3B1-205ENST00000424674 MAPTP10636 758 aaKnown RBP5.75□□□□□ -1.49
SF3B1-205ENST00000424674 TNP2Q05952 138 aa5.75□□□□□ -1.49
SF3B1-205ENST00000424674 TBCELQ5QJ74 424 aa5.75□□□□□ -1.49
SF3B1-205ENST00000424674 FAM182BQ5T319 152 aa5.75□□□□□ -1.49
SF3B1-205ENST00000424674 LARGE2Q8N3Y3 721 aa5.75□□□□□ -1.49
SF3B1-205ENST00000424674 TRAIPQ9BWF2 469 aa5.75□□□□□ -1.49
SF3B1-205ENST00000424674 MKRN1Q9UHC7 482 aaKnown RBP5.75□□□□□ -1.49
SF3B1-205ENST00000424674 ZNF777Q9ULD5 760 aaPredicted RBP5.75□□□□□ -1.49
SF3B1-205ENST00000424674 ZNF232Q9UNY5 417 aa5.75□□□□□ -1.49
SF3B1-205ENST00000424674 PALM3A6NDB9 673 aaPredicted RBP5.74□□□□□ -1.49
SF3B1-205ENST00000424674 M0R2N6 131 aa5.74□□□□□ -1.49
SF3B1-205ENST00000424674 ZBTB7BO15156 539 aaPredicted RBP5.74□□□□□ -1.49
SF3B1-205ENST00000424674 CD33P20138 364 aa5.74□□□□□ -1.49
SF3B1-205ENST00000424674 AMPD1P23109 780 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms