RNA–Protein interactions for RNA: ENST00000424645.5

NCSTN-204, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-204ENST00000424645 POLA2Q14181 598 aa13.22□□□□□ -0.29
NCSTN-204ENST00000424645 SLC4A9Q96Q91 983 aa13.22□□□□□ -0.29
NCSTN-204ENST00000424645 MIS18AQ9NYP9 233 aa13.22□□□□□ -0.29
NCSTN-204ENST00000424645 LAS1LQ9Y4W2 734 aaKnown RBP13.22□□□□□ -0.29
NCSTN-204ENST00000424645 KDM3BQ7LBC6 1761 aa13.22□□□□□ -0.29
NCSTN-204ENST00000424645 C5P01031 1676 aa13.21□□□□□ -0.29
NCSTN-204ENST00000424645 ERBB4Q15303 1308 aa13.21□□□□□ -0.29
NCSTN-204ENST00000424645 E9PSI1 815 aa13.21□□□□□ -0.29
NCSTN-204ENST00000424645 KCNQ3O43525 872 aa13.21□□□□□ -0.29
NCSTN-204ENST00000424645 CYP19A1P11511 503 aaPredicted RBP13.21□□□□□ -0.29
NCSTN-204ENST00000424645 AK7Q96M32 723 aa13.21□□□□□ -0.29
NCSTN-204ENST00000424645 MBIPQ9NS73 344 aa13.21□□□□□ -0.29
NCSTN-204ENST00000424645 NUP188Q5SRE5 1749 aa13.21□□□□□ -0.3
NCSTN-204ENST00000424645 RPS6KA4O75676 772 aa13.2□□□□□ -0.3
NCSTN-204ENST00000424645 SSFA2P28290 1259 aa13.2□□□□□ -0.3
NCSTN-204ENST00000424645 DNAJC10Q8IXB1 793 aa13.2□□□□□ -0.3
NCSTN-204ENST00000424645 LINC00116Q8NCU8 138 aa13.2□□□□□ -0.3
NCSTN-204ENST00000424645 CCDC87Q9NVE4 849 aa13.2□□□□□ -0.3
NCSTN-204ENST00000424645 TFCP2L1Q9NZI6 479 aa13.2□□□□□ -0.3
NCSTN-204ENST00000424645 RTCBQ9Y3I0 505 aaKnown RBP13.2□□□□□ -0.3
NCSTN-204ENST00000424645 SALL2Q9Y467 1007 aaPredicted RBP13.2□□□□□ -0.3
NCSTN-204ENST00000424645 CRKLP46109 303 aaKnown RBP13.19□□□□□ -0.3
NCSTN-204ENST00000424645 SLC16A10Q8TF71 515 aa13.19□□□□□ -0.3
NCSTN-204ENST00000424645 A0A087WZG4 1122 aa13.18□□□□□ -0.3
NCSTN-204ENST00000424645 IL6STP40189 918 aaPredicted RBP13.18□□□□□ -0.3
NCSTN-204ENST00000424645 HNRNPUQ00839 825 aaKnown RBP eCLIP13.18□□□□□ -0.3
NCSTN-204ENST00000424645 NPM2Q86SE8 214 aaKnown RBP13.18□□□□□ -0.3
NCSTN-204ENST00000424645 C4BP0C0L5 1744 aa13.18□□□□□ -0.3
NCSTN-204ENST00000424645 ZBED9Q6R2W3 1325 aa13.17□□□□□ -0.3
NCSTN-204ENST00000424645 RGL2O15211 777 aa13.17□□□□□ -0.3
NCSTN-204ENST00000424645 GNPATO15228 680 aa13.17□□□□□ -0.3
NCSTN-204ENST00000424645 KCNQ4P56696 695 aa13.17□□□□□ -0.3
NCSTN-204ENST00000424645 SLFN5Q08AF3 891 aa13.17□□□□□ -0.3
NCSTN-204ENST00000424645 TRAPPC3LQ5T215 181 aa13.17□□□□□ -0.3
NCSTN-204ENST00000424645 INTS5Q6P9B9 1019 aaKnown RBP13.17□□□□□ -0.3
NCSTN-204ENST00000424645 ZNF428Q96B54 188 aa13.17□□□□□ -0.3
NCSTN-204ENST00000424645 USP16Q9Y5T5 823 aa13.17□□□□□ -0.3
NCSTN-204ENST00000424645 TAF1LQ8IZX4 1826 aa13.17□□□□□ -0.3
NCSTN-204ENST00000424645 COL5A3P25940 1745 aaPredicted RBP13.16□□□□□ -0.3
NCSTN-204ENST00000424645 TJP1Q07157 1748 aa13.16□□□□□ -0.3
NCSTN-204ENST00000424645 CT47B1P0C2W7 299 aaPredicted RBP13.16□□□□□ -0.3
NCSTN-204ENST00000424645 ZNF827Q17R98 1081 aa13.16□□□□□ -0.3
NCSTN-204ENST00000424645 DUSP27Q5VZP5 1158 aa13.16□□□□□ -0.3
NCSTN-204ENST00000424645 TRMT2AQ8IZ69 625 aaKnown RBP13.16□□□□□ -0.3
NCSTN-204ENST00000424645 ANO8Q9HCE9 1232 aaPredicted RBP13.16□□□□□ -0.3
NCSTN-204ENST00000424645 QSER1Q2KHR3 1735 aa13.16□□□□□ -0.3
NCSTN-204ENST00000424645 FANCIQ9NVI1 1328 aa13.15□□□□□ -0.3
NCSTN-204ENST00000424645 ZBTB22O15209 634 aa13.15□□□□□ -0.3
NCSTN-204ENST00000424645 EIF5P55010 431 aaKnown RBP13.15□□□□□ -0.3
NCSTN-204ENST00000424645 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.14□□□□□ -0.31
NCSTN-204ENST00000424645 R3HDM1Q15032 1099 aaKnown RBP13.14□□□□□ -0.31
NCSTN-204ENST00000424645 TWISTNBQ3B726 338 aaPredicted RBP13.14□□□□□ -0.31
NCSTN-204ENST00000424645 CCDC30Q5VVM6 783 aa13.14□□□□□ -0.31
NCSTN-204ENST00000424645 TSR2Q969E8 191 aaKnown RBP13.14□□□□□ -0.31
NCSTN-204ENST00000424645 DBF4Q9UBU7 674 aaPredicted RBP13.14□□□□□ -0.31
NCSTN-204ENST00000424645 PNPLA7Q6ZV29 1317 aa13.13□□□□□ -0.31
NCSTN-204ENST00000424645 A1BGP04217 495 aa13.13□□□□□ -0.31
NCSTN-204ENST00000424645 RFC4P35249 363 aa13.13□□□□□ -0.31
NCSTN-204ENST00000424645 HDGFL1Q5TGJ6 251 aa13.13□□□□□ -0.31
NCSTN-204ENST00000424645 DDX21Q9NR30 783 aaKnown RBP eCLIP13.13□□□□□ -0.31
NCSTN-204ENST00000424645 ZBTB1Q9Y2K1 713 aa13.13□□□□□ -0.31
NCSTN-204ENST00000424645 LAMB4A4D0S4 1761 aa13.12□□□□□ -0.31
NCSTN-204ENST00000424645 PRAMEF22A3QJZ6 481 aa13.12□□□□□ -0.31
NCSTN-204ENST00000424645 CANXP27824 592 aaKnown RBP13.12□□□□□ -0.31
NCSTN-204ENST00000424645 COL23A1Q86Y22 540 aaPredicted RBP13.12□□□□□ -0.31
NCSTN-204ENST00000424645 NLGN1Q8N2Q7 840 aa13.12□□□□□ -0.31
NCSTN-204ENST00000424645 C8orf58Q8NAV2 365 aa13.12□□□□□ -0.31
NCSTN-204ENST00000424645 ARHGEF1Q92888 912 aaKnown RBP13.12□□□□□ -0.31
NCSTN-204ENST00000424645 HYPKQ9NX55 129 aa13.12□□□□□ -0.31
NCSTN-204ENST00000424645 COL15A1P39059 1388 aa13.11□□□□□ -0.31
NCSTN-204ENST00000424645 SENP3-EIF4A1A0A087X0R7 540 aa13.11□□□□□ -0.31
NCSTN-204ENST00000424645 ZPR1O75312 459 aa13.11□□□□□ -0.31
NCSTN-204ENST00000424645 VAMP4O75379 141 aa13.11□□□□□ -0.31
NCSTN-204ENST00000424645 EIF2S2P20042 333 aaKnown RBP13.11□□□□□ -0.31
NCSTN-204ENST00000424645 EXOSC9Q06265 439 aaKnown RBP13.11□□□□□ -0.31
NCSTN-204ENST00000424645 CLEC4GQ6UXB4 293 aa13.11□□□□□ -0.31
NCSTN-204ENST00000424645 STK31Q9BXU1 1019 aa13.11□□□□□ -0.31
NCSTN-204ENST00000424645 MTFR1LQ9H019 292 aa13.11□□□□□ -0.31
NCSTN-204ENST00000424645 NARFQ9UHQ1 456 aa13.11□□□□□ -0.31
NCSTN-204ENST00000424645 NBPF26B4DH59 902 aa13.1□□□□□ -0.31
NCSTN-204ENST00000424645 ERVV-1B6SEH8 477 aa13.1□□□□□ -0.31
NCSTN-204ENST00000424645 NBPF10Q6P3W6 841 aaKnown RBP13.1□□□□□ -0.31
NCSTN-204ENST00000424645 NBPF15Q8N660 670 aa13.1□□□□□ -0.31
NCSTN-204ENST00000424645 UBR3Q6ZT12 1888 aa13.1□□□□□ -0.31
NCSTN-204ENST00000424645 PHF14O94880 888 aa13.09□□□□□ -0.31
NCSTN-204ENST00000424645 PDIA6Q15084 440 aa13.09□□□□□ -0.31
NCSTN-204ENST00000424645 KRT24Q2M2I5 525 aa13.09□□□□□ -0.31
NCSTN-204ENST00000424645 TSPYL6Q8N831 410 aa13.09□□□□□ -0.31
NCSTN-204ENST00000424645 ATF5Q9Y2D1 282 aaPredicted RBP13.09□□□□□ -0.31
NCSTN-204ENST00000424645 ZNF652Q9Y2D9 606 aa13.09□□□□□ -0.31
NCSTN-204ENST00000424645 ZBTB12Q9Y330 459 aaPredicted RBP13.09□□□□□ -0.31
NCSTN-204ENST00000424645 USP42Q9H9J4 1324 aaKnown RBP13.09□□□□□ -0.31
NCSTN-204ENST00000424645 PSDA5PKW4 1024 aaPredicted RBP13.08□□□□□ -0.32
NCSTN-204ENST00000424645 ELL2O00472 640 aaPredicted RBP13.08□□□□□ -0.32
NCSTN-204ENST00000424645 ALDH1L2Q3SY69 923 aa13.08□□□□□ -0.32
NCSTN-204ENST00000424645 KIF6Q6ZMV9 814 aa13.08□□□□□ -0.32
NCSTN-204ENST00000424645 DZIP3Q86Y13 1208 aaKnown RBP13.08□□□□□ -0.32
NCSTN-204ENST00000424645 CDCA7LQ96GN5 454 aa13.08□□□□□ -0.32
NCSTN-204ENST00000424645 SPON1Q9HCB6 807 aa13.08□□□□□ -0.32
NCSTN-204ENST00000424645 MYH14Q7Z406 1995 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 844.9 ms