RNA–Protein interactions for RNA: ENST00000424463.4

VPS8-204, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-204ENST00000424463 GOLGA6DP0CG33 693 aa10.44□□□□□ -0.74
VPS8-204ENST00000424463 HDAC1Q13547 482 aaPredicted RBP10.44□□□□□ -0.74
VPS8-204ENST00000424463 KRT24Q2M2I5 525 aa10.44□□□□□ -0.74
VPS8-204ENST00000424463 GOLGA6AQ9NYA3 693 aa10.44□□□□□ -0.74
VPS8-204ENST00000424463 MS4A1P11836 297 aa10.43□□□□□ -0.74
VPS8-204ENST00000424463 USHBP1Q8N6Y0 703 aa10.43□□□□□ -0.74
VPS8-204ENST00000424463 ITFG2Q969R8 447 aa10.43□□□□□ -0.74
VPS8-204ENST00000424463 EVI5LQ96CN4 794 aa10.43□□□□□ -0.74
VPS8-204ENST00000424463 TWISTNBQ3B726 338 aaPredicted RBP10.43□□□□□ -0.74
VPS8-204ENST00000424463 ALDH1L2Q3SY69 923 aa10.43□□□□□ -0.74
VPS8-204ENST00000424463 ITPRIPQ8IWB1 547 aa10.43□□□□□ -0.74
VPS8-204ENST00000424463 TMEM57Q8N5G2 664 aa10.43□□□□□ -0.74
VPS8-204ENST00000424463 MTA3Q9BTC8 594 aa10.43□□□□□ -0.74
VPS8-204ENST00000424463 IGSF1Q8N6C5 1336 aa10.42□□□□□ -0.74
VPS8-204ENST00000424463 ARHGEF10O15013 1369 aa10.42□□□□□ -0.74
VPS8-204ENST00000424463 ZC3H12AQ5D1E8 599 aaKnown RBP10.42□□□□□ -0.74
VPS8-204ENST00000424463 MRPL50Q8N5N7 158 aaKnown RBP10.42□□□□□ -0.74
VPS8-204ENST00000424463 BACH2Q9BYV9 841 aa10.42□□□□□ -0.74
VPS8-204ENST00000424463 C19orf44Q9H6X5 657 aa10.42□□□□□ -0.74
VPS8-204ENST00000424463 CGNQ9P2M7 1197 aaKnown RBP10.42□□□□□ -0.74
VPS8-204ENST00000424463 IPO8O15397 1037 aaKnown RBP10.41□□□□□ -0.74
VPS8-204ENST00000424463 CCDC172P0C7W6 258 aa10.41□□□□□ -0.74
VPS8-204ENST00000424463 MFAP1P55081 439 aaKnown RBP10.41□□□□□ -0.74
VPS8-204ENST00000424463 APBB1IPQ7Z5R6 666 aaPredicted RBP10.41□□□□□ -0.74
VPS8-204ENST00000424463 DDX17Q92841 729 aaKnown RBP10.41□□□□□ -0.74
VPS8-204ENST00000424463 CHL1O00533 1208 aa10.41□□□□□ -0.74
VPS8-204ENST00000424463 KRT28Q7Z3Y7 464 aa10.41□□□□□ -0.74
VPS8-204ENST00000424463 EFCC1Q9HA90 598 aa10.41□□□□□ -0.74
VPS8-204ENST00000424463 FOXD4Q12950 439 aaPredicted RBP10.4□□□□□ -0.74
VPS8-204ENST00000424463 MSL3Q8N5Y2 521 aaKnown RBP10.4□□□□□ -0.74
VPS8-204ENST00000424463 ATL2Q8NHH9 583 aa10.4□□□□□ -0.74
VPS8-204ENST00000424463 DLG5Q8TDM6 1919 aa10.4□□□□□ -0.74
VPS8-204ENST00000424463 MRVI1Q9Y6F6 885 aa10.4□□□□□ -0.74
VPS8-204ENST00000424463 RGPD1P0DJD0 1748 aa10.4□□□□□ -0.74
VPS8-204ENST00000424463 MARF1Q9Y4F3 1742 aaKnown RBP10.4□□□□□ -0.74
VPS8-204ENST00000424463 KDRP35968 1356 aa10.4□□□□□ -0.74
VPS8-204ENST00000424463 KIF16BQ96L93 1317 aa10.4□□□□□ -0.74
VPS8-204ENST00000424463 C1QTNF12Q5T7M4 302 aa10.4□□□□□ -0.74
VPS8-204ENST00000424463 NOL8Q76FK4 1167 aaKnown RBP10.4□□□□□ -0.74
VPS8-204ENST00000424463 IP6K1Q92551 441 aa10.4□□□□□ -0.74
VPS8-204ENST00000424463 CALR3Q96L12 384 aaKnown RBP10.4□□□□□ -0.74
VPS8-204ENST00000424463 DHX16O60231 1041 aaKnown RBP10.39□□□□□ -0.75
VPS8-204ENST00000424463 GCP02774 474 aa10.39□□□□□ -0.75
VPS8-204ENST00000424463 RTF1Q92541 710 aaKnown RBP10.39□□□□□ -0.75
VPS8-204ENST00000424463 RBM28Q9NW13 759 aaKnown RBP10.39□□□□□ -0.75
VPS8-204ENST00000424463 NUB1Q9Y5A7 615 aa10.39□□□□□ -0.75
VPS8-204ENST00000424463 TMEM94Q12767 1356 aa10.39□□□□□ -0.75
VPS8-204ENST00000424463 ESPNB1AK53 854 aa10.39□□□□□ -0.75
VPS8-204ENST00000424463 MYCBPQ99417 103 aaPredicted RBP10.39□□□□□ -0.75
VPS8-204ENST00000424463 CCDC94Q9BW85 323 aaPredicted RBP10.39□□□□□ -0.75
VPS8-204ENST00000424463 CRB1P82279 1406 aa10.38□□□□□ -0.75
VPS8-204ENST00000424463 KDM4FA0A1W2PPD8 638 aa10.38□□□□□ -0.75
VPS8-204ENST00000424463 ATF3P18847 181 aa10.38□□□□□ -0.75
VPS8-204ENST00000424463 NFKBIBQ15653 356 aa10.38□□□□□ -0.75
VPS8-204ENST00000424463 LRRC59Q96AG4 307 aaKnown RBP10.38□□□□□ -0.75
VPS8-204ENST00000424463 TULP2O00295 520 aa10.38□□□□□ -0.75
VPS8-204ENST00000424463 UVSSAQ2YD98 709 aa10.38□□□□□ -0.75
VPS8-204ENST00000424463 KCNH5Q8NCM2 988 aa10.38□□□□□ -0.75
VPS8-204ENST00000424463 RWDD1Q9H446 243 aaPredicted RBP10.38□□□□□ -0.75
VPS8-204ENST00000424463 ZBTB40Q9NUA8 1239 aa10.38□□□□□ -0.75
VPS8-204ENST00000424463 DDX19BQ9UMR2 479 aa10.38□□□□□ -0.75
VPS8-204ENST00000424463 C1orf167Q5SNV9 1468 aa10.38□□□□□ -0.75
VPS8-204ENST00000424463 GAS2L2Q8NHY3 880 aa10.37□□□□□ -0.75
VPS8-204ENST00000424463 KIF24Q5T7B8 1368 aa10.37□□□□□ -0.75
VPS8-204ENST00000424463 RHBDL3P58872 404 aa10.37□□□□□ -0.75
VPS8-204ENST00000424463 IL17REQ8NFR9 667 aa10.37□□□□□ -0.75
VPS8-204ENST00000424463 NCAPGQ9BPX3 1015 aa10.37□□□□□ -0.75
VPS8-204ENST00000424463 TSPYL4Q9UJ04 414 aa10.37□□□□□ -0.75
VPS8-204ENST00000424463 NWD1Q149M9 1564 aa10.36□□□□□ -0.75
VPS8-204ENST00000424463 GNAT3A8MTJ3 354 aa10.36□□□□□ -0.75
VPS8-204ENST00000424463 COQ9O75208 318 aa10.36□□□□□ -0.75
VPS8-204ENST00000424463 ARHGEF25Q86VW2 580 aa10.36□□□□□ -0.75
VPS8-204ENST00000424463 FEZ2Q9UHY8 353 aaPredicted RBP10.36□□□□□ -0.75
VPS8-204ENST00000424463 PDZRN3Q9UPQ7 1066 aa10.36□□□□□ -0.75
VPS8-204ENST00000424463 AXIN2Q9Y2T1 843 aa10.36□□□□□ -0.75
VPS8-204ENST00000424463 NFAT5O94916 1531 aa10.36□□□□□ -0.75
VPS8-204ENST00000424463 TPD52L2O43399 206 aaKnown RBP10.36□□□□□ -0.75
VPS8-204ENST00000424463 ZC3H6P61129 1189 aaKnown RBP10.36□□□□□ -0.75
VPS8-204ENST00000424463 ARHGAP45Q92619 1136 aa10.36□□□□□ -0.75
VPS8-204ENST00000424463 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.35□□□□□ -0.75
VPS8-204ENST00000424463 ZBTB7BO15156 539 aaPredicted RBP10.35□□□□□ -0.75
VPS8-204ENST00000424463 C8orf34Q49A92 452 aa10.35□□□□□ -0.75
VPS8-204ENST00000424463 KIAA1211Q6ZU35 1233 aa10.35□□□□□ -0.75
VPS8-204ENST00000424463 KCNJ4P48050 445 aa10.34□□□□□ -0.75
VPS8-204ENST00000424463 RBM26Q5T8P6 1007 aaKnown RBP10.34□□□□□ -0.75
VPS8-204ENST00000424463 RTL1A6NKG5 1358 aa10.34□□□□□ -0.75
VPS8-204ENST00000424463 TRIM6-TRIM34B2RNG4 842 aa10.34□□□□□ -0.75
VPS8-204ENST00000424463 CSPP1Q1MSJ5 1256 aa10.34□□□□□ -0.75
VPS8-204ENST00000424463 FAM161AQ3B820 660 aa10.34□□□□□ -0.75
VPS8-204ENST00000424463 L1TD1Q5T7N2 865 aaKnown RBP10.34□□□□□ -0.75
VPS8-204ENST00000424463 TMCO4Q5TGY1 634 aa10.34□□□□□ -0.75
VPS8-204ENST00000424463 GET4Q7L5D6 327 aaPredicted RBP10.34□□□□□ -0.75
VPS8-204ENST00000424463 CABLES1Q8TDN4 633 aa10.34□□□□□ -0.75
VPS8-204ENST00000424463 TRIM34Q9BYJ4 488 aa10.34□□□□□ -0.75
VPS8-204ENST00000424463 STRCP1A6NGW2 1772 aa10.33□□□□□ -0.76
VPS8-204ENST00000424463 MSH6P52701 1360 aa10.33□□□□□ -0.76
VPS8-204ENST00000424463 SLC4A2P04920 1241 aa10.33□□□□□ -0.76
VPS8-204ENST00000424463 PROCA1Q8NCQ7 364 aaPredicted RBP10.33□□□□□ -0.76
VPS8-204ENST00000424463 ANKRD24Q8TF21 1146 aa10.33□□□□□ -0.76
VPS8-204ENST00000424463 LGR6Q9HBX8 967 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms