RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 SIK1P57059 783 aa18■□□□□ 0.47
ACTN4-203ENST00000424234 TWISTNBQ3B726 338 aaPredicted RBP18■□□□□ 0.47
ACTN4-203ENST00000424234 BCORQ6W2J9 1755 aa18■□□□□ 0.47
ACTN4-203ENST00000424234 ELL2O00472 640 aaPredicted RBP18■□□□□ 0.47
ACTN4-203ENST00000424234 MSH5O43196 834 aa18■□□□□ 0.47
ACTN4-203ENST00000424234 HOXB7P09629 217 aa18■□□□□ 0.47
ACTN4-203ENST00000424234 MS4A1P11836 297 aa18■□□□□ 0.47
ACTN4-203ENST00000424234 VSIG10Q8N0Z9 540 aa18■□□□□ 0.47
ACTN4-203ENST00000424234 SOS1Q07889 1333 aaPredicted RBP17.99■□□□□ 0.47
ACTN4-203ENST00000424234 ARFGEF2Q9Y6D5 1785 aa17.99■□□□□ 0.47
ACTN4-203ENST00000424234 C20orf194Q5TEA3 1177 aa17.99■□□□□ 0.47
ACTN4-203ENST00000424234 APBA3O96018 575 aa17.98■□□□□ 0.47
ACTN4-203ENST00000424234 SNRPA1P09661 255 aaKnown RBP17.98■□□□□ 0.47
ACTN4-203ENST00000424234 ILDR2Q71H61 639 aa17.98■□□□□ 0.47
ACTN4-203ENST00000424234 ANKRD36CQ5JPF3 1778 aa17.97■□□□□ 0.47
ACTN4-203ENST00000424234 NUP98P52948 1817 aa17.97■□□□□ 0.47
ACTN4-203ENST00000424234 PLSCR1O15162 318 aa17.97■□□□□ 0.47
ACTN4-203ENST00000424234 VAMP4O75379 141 aa17.97■□□□□ 0.47
ACTN4-203ENST00000424234 CT47B1P0C2W7 299 aaPredicted RBP17.96■□□□□ 0.47
ACTN4-203ENST00000424234 ITPK1Q13572 414 aa17.96■□□□□ 0.47
ACTN4-203ENST00000424234 DNAJC10Q8IXB1 793 aa17.96■□□□□ 0.47
ACTN4-203ENST00000424234 AFDNP55196 1824 aaKnown RBP17.96■□□□□ 0.47
ACTN4-203ENST00000424234 SCN7AQ01118 1682 aa17.96■□□□□ 0.47
ACTN4-203ENST00000424234 ATP6V1AP38606 617 aa17.96■□□□□ 0.46
ACTN4-203ENST00000424234 CCNL1Q9UK58 526 aaPredicted RBP17.96■□□□□ 0.46
ACTN4-203ENST00000424234 USP16Q9Y5T5 823 aa17.96■□□□□ 0.46
ACTN4-203ENST00000424234 KCNQ4P56696 695 aa17.95■□□□□ 0.46
ACTN4-203ENST00000424234 HDGFL1Q5TGJ6 251 aa17.95■□□□□ 0.46
ACTN4-203ENST00000424234 CENPQQ7L2Z9 268 aaPredicted RBP17.94■□□□□ 0.46
ACTN4-203ENST00000424234 LRRC4BQ9NT99 713 aa17.94■□□□□ 0.46
ACTN4-203ENST00000424234 KDM2BQ8NHM5 1336 aa17.93■□□□□ 0.46
ACTN4-203ENST00000424234 SF3B2Q13435 895 aaKnown RBP17.93■□□□□ 0.46
ACTN4-203ENST00000424234 TXNRD1Q16881 649 aa17.93■□□□□ 0.46
ACTN4-203ENST00000424234 ERICH6Q7L0X2 663 aa17.93■□□□□ 0.46
ACTN4-203ENST00000424234 LINC00116Q8NCU8 138 aa17.93■□□□□ 0.46
ACTN4-203ENST00000424234 EIF2S2P20042 333 aaKnown RBP17.92■□□□□ 0.46
ACTN4-203ENST00000424234 BAG6P46379 1132 aa17.92■□□□□ 0.46
ACTN4-203ENST00000424234 SLC27A3Q5K4L6 730 aa17.92■□□□□ 0.46
ACTN4-203ENST00000424234 CCDC125Q86Z20 511 aa17.92■□□□□ 0.46
ACTN4-203ENST00000424234 PROM2Q8N271 834 aa17.92■□□□□ 0.46
ACTN4-203ENST00000424234 NECTIN2Q92692 538 aa17.92■□□□□ 0.46
ACTN4-203ENST00000424234 ZNF428Q96B54 188 aa17.92■□□□□ 0.46
ACTN4-203ENST00000424234 TEX13AQ9BXU3 409 aaPredicted RBP17.92■□□□□ 0.46
ACTN4-203ENST00000424234 CYP19A1P11511 503 aaPredicted RBP17.91■□□□□ 0.46
ACTN4-203ENST00000424234 PDE3AQ14432 1141 aa17.91■□□□□ 0.46
ACTN4-203ENST00000424234 CAMKK2Q96RR4 588 aa17.91■□□□□ 0.46
ACTN4-203ENST00000424234 ERBB4Q15303 1308 aa17.91■□□□□ 0.46
ACTN4-203ENST00000424234 ANP32AP39687 249 aaKnown RBP17.91■□□□□ 0.46
ACTN4-203ENST00000424234 RARSP54136 660 aaKnown RBP17.91■□□□□ 0.46
ACTN4-203ENST00000424234 EN1Q05925 392 aaPredicted RBP17.91■□□□□ 0.46
ACTN4-203ENST00000424234 DEFB132Q7Z7B7 95 aa17.91■□□□□ 0.46
ACTN4-203ENST00000424234 UPF1Q92900 1129 aaKnown RBP eCLIP17.91■□□□□ 0.463e-26■■■■■ 28.8
ACTN4-203ENST00000424234 CHPF2Q9P2E5 772 aa17.91■□□□□ 0.46
ACTN4-203ENST00000424234 CNTNAP4Q9C0A0 1308 aa17.9■□□□□ 0.46
ACTN4-203ENST00000424234 BCAR3O75815 825 aa17.9■□□□□ 0.46
ACTN4-203ENST00000424234 EZH2Q15910 746 aaKnown RBP17.9■□□□□ 0.46
ACTN4-203ENST00000424234 CCDC30Q5VVM6 783 aa17.9■□□□□ 0.46
ACTN4-203ENST00000424234 SSH1Q8WYL5 1049 aa17.9■□□□□ 0.46
ACTN4-203ENST00000424234 BCL2L13Q9BXK5 485 aa17.9■□□□□ 0.46
ACTN4-203ENST00000424234 STARD3NLO95772 234 aa17.89■□□□□ 0.45
ACTN4-203ENST00000424234 CRKLP46109 303 aaKnown RBP17.89■□□□□ 0.45
ACTN4-203ENST00000424234 PROSER3Q2NL68 480 aa17.89■□□□□ 0.45
ACTN4-203ENST00000424234 ALDH1L2Q3SY69 923 aa17.89■□□□□ 0.45
ACTN4-203ENST00000424234 ZBTB1Q9Y2K1 713 aa17.89■□□□□ 0.45
ACTN4-203ENST00000424234 ANXA1P04083 346 aa17.88■□□□□ 0.45
ACTN4-203ENST00000424234 A1BGP04217 495 aa17.88■□□□□ 0.45
ACTN4-203ENST00000424234 PIP4K2AP48426 406 aaPredicted RBP17.88■□□□□ 0.45
ACTN4-203ENST00000424234 PDIA6Q15084 440 aa17.88■□□□□ 0.45
ACTN4-203ENST00000424234 NBPF26B4DH59 902 aa17.87■□□□□ 0.45
ACTN4-203ENST00000424234 NBPF14Q5TI25 921 aa17.87■□□□□ 0.45
ACTN4-203ENST00000424234 NBPF10Q6P3W6 841 aaKnown RBP17.87■□□□□ 0.45
ACTN4-203ENST00000424234 NBPF15Q8N660 670 aa17.87■□□□□ 0.45
ACTN4-203ENST00000424234 STK31Q9BXU1 1019 aa17.87■□□□□ 0.45
ACTN4-203ENST00000424234 SMC4Q9NTJ3 1288 aa17.87■□□□□ 0.45
ACTN4-203ENST00000424234 CCDC87Q9NVE4 849 aa17.87■□□□□ 0.45
ACTN4-203ENST00000424234 CASZ1Q86V15 1759 aa17.87■□□□□ 0.45
ACTN4-203ENST00000424234 PDE4AP27815 886 aa17.87■□□□□ 0.45
ACTN4-203ENST00000424234 INTS5Q6P9B9 1019 aaKnown RBP17.87■□□□□ 0.45
ACTN4-203ENST00000424234 LRP10Q7Z4F1 713 aa17.87■□□□□ 0.45
ACTN4-203ENST00000424234 CHMP4AQ9BY43 222 aa17.87■□□□□ 0.45
ACTN4-203ENST00000424234 BACH2Q9BYV9 841 aa17.87■□□□□ 0.45
ACTN4-203ENST00000424234 DDX21Q9NR30 783 aaKnown RBP eCLIP17.87■□□□□ 0.45
ACTN4-203ENST00000424234 DBF4Q9UBU7 674 aaPredicted RBP17.87■□□□□ 0.45
ACTN4-203ENST00000424234 MRPL50Q8N5N7 158 aaKnown RBP17.86■□□□□ 0.45
ACTN4-203ENST00000424234 COL15A1P39059 1388 aa17.84■□□□□ 0.45
ACTN4-203ENST00000424234 SLC4A2P04920 1241 aa17.84■□□□□ 0.45
ACTN4-203ENST00000424234 MYL6BP14649 208 aa17.84■□□□□ 0.45
ACTN4-203ENST00000424234 CANXP27824 592 aaKnown RBP17.84■□□□□ 0.45
ACTN4-203ENST00000424234 AAMPQ13685 434 aa17.84■□□□□ 0.45
ACTN4-203ENST00000424234 RC3H1Q5TC82 1133 aaKnown RBP17.84■□□□□ 0.45
ACTN4-203ENST00000424234 COL24A1Q17RW2 1714 aa17.84■□□□□ 0.45
ACTN4-203ENST00000424234 BRPF1P55201 1214 aaPredicted RBP17.83■□□□□ 0.45
ACTN4-203ENST00000424234 G2E3Q7L622 706 aa17.83■□□□□ 0.45
ACTN4-203ENST00000424234 KIF16BQ96L93 1317 aa17.83■□□□□ 0.44
ACTN4-203ENST00000424234 IL6STP40189 918 aaPredicted RBP17.83■□□□□ 0.44
ACTN4-203ENST00000424234 ZNF827Q17R98 1081 aa17.83■□□□□ 0.44
ACTN4-203ENST00000424234 AK7Q96M32 723 aa17.83■□□□□ 0.44
ACTN4-203ENST00000424234 IPO9Q96P70 1041 aaKnown RBP17.83■□□□□ 0.44
ACTN4-203ENST00000424234 PHAXQ9H814 394 aaKnown RBP17.83■□□□□ 0.44
ACTN4-203ENST00000424234 HYPKQ9NX55 129 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms