RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 CANXP27824 592 aaKnown RBP20.39■□□□□ 0.85
ABCA1-203ENST00000423487 FRAT1Q92837 279 aaPredicted RBP20.39■□□□□ 0.85
ABCA1-203ENST00000423487 DDX21Q9NR30 783 aaKnown RBP eCLIP20.39■□□□□ 0.85
ABCA1-203ENST00000423487 CCNL1Q9UK58 526 aaPredicted RBP20.39■□□□□ 0.85
ABCA1-203ENST00000423487 CYP19A1P11511 503 aaPredicted RBP20.38■□□□□ 0.85
ABCA1-203ENST00000423487 HYPKQ9NX55 129 aa20.38■□□□□ 0.85
ABCA1-203ENST00000423487 LAMB4A4D0S4 1761 aa20.38■□□□□ 0.85
ABCA1-203ENST00000423487 PLSCR1O15162 318 aa20.37■□□□□ 0.85
ABCA1-203ENST00000423487 ITPK1Q13572 414 aa20.37■□□□□ 0.85
ABCA1-203ENST00000423487 NOB1Q9ULX3 412 aaKnown RBP20.37■□□□□ 0.85
ABCA1-203ENST00000423487 ZNF831Q5JPB2 1677 aa20.37■□□□□ 0.85
ABCA1-203ENST00000423487 CICQ96RK0 1608 aaPredicted RBP20.37■□□□□ 0.85
ABCA1-203ENST00000423487 HMGB2P26583 209 aaKnown RBP20.37■□□□□ 0.85
ABCA1-203ENST00000423487 PDIA6Q15084 440 aa20.37■□□□□ 0.85
ABCA1-203ENST00000423487 SLC27A3Q5K4L6 730 aa20.37■□□□□ 0.85
ABCA1-203ENST00000423487 ZKSCAN2Q63HK3 967 aa20.37■□□□□ 0.85
ABCA1-203ENST00000423487 A1BGP04217 495 aa20.36■□□□□ 0.85
ABCA1-203ENST00000423487 ARHGAP45Q92619 1136 aa20.36■□□□□ 0.85
ABCA1-203ENST00000423487 PTPRCP08575 1304 aa20.35■□□□□ 0.85
ABCA1-203ENST00000423487 PLIN1O60240 522 aa20.35■□□□□ 0.85
ABCA1-203ENST00000423487 TJP1Q07157 1748 aa20.35■□□□□ 0.85
ABCA1-203ENST00000423487 LY75O60449 1722 aa20.34■□□□□ 0.85
ABCA1-203ENST00000423487 ANXA1P04083 346 aa20.34■□□□□ 0.85
ABCA1-203ENST00000423487 MYL6BP14649 208 aa20.34■□□□□ 0.85
ABCA1-203ENST00000423487 FLIIQ13045 1269 aa20.34■□□□□ 0.85
ABCA1-203ENST00000423487 SF3B2Q13435 895 aaKnown RBP20.34■□□□□ 0.85
ABCA1-203ENST00000423487 PROSER3Q2NL68 480 aa20.34■□□□□ 0.85
ABCA1-203ENST00000423487 NBPF26B4DH59 902 aa20.33■□□□□ 0.85
ABCA1-203ENST00000423487 MS4A1P11836 297 aa20.33■□□□□ 0.85
ABCA1-203ENST00000423487 CRKLP46109 303 aaKnown RBP20.33■□□□□ 0.85
ABCA1-203ENST00000423487 NBPF14Q5TI25 921 aa20.33■□□□□ 0.85
ABCA1-203ENST00000423487 NBPF10Q6P3W6 841 aaKnown RBP20.33■□□□□ 0.85
ABCA1-203ENST00000423487 ATF7IPQ6VMQ6 1270 aa20.33■□□□□ 0.85
ABCA1-203ENST00000423487 G2E3Q7L622 706 aa20.33■□□□□ 0.85
ABCA1-203ENST00000423487 NBPF15Q8N660 670 aa20.33■□□□□ 0.85
ABCA1-203ENST00000423487 API5Q9BZZ5 524 aaKnown RBP20.33■□□□□ 0.85
ABCA1-203ENST00000423487 PHAXQ9H814 394 aaKnown RBP20.33■□□□□ 0.85
ABCA1-203ENST00000423487 CCDC87Q9NVE4 849 aa20.33■□□□□ 0.85
ABCA1-203ENST00000423487 PIP4K2AP48426 406 aaPredicted RBP20.32■□□□□ 0.84
ABCA1-203ENST00000423487 KCNQ4P56696 695 aa20.32■□□□□ 0.84
ABCA1-203ENST00000423487 TXNRD1Q16881 649 aa20.32■□□□□ 0.84
ABCA1-203ENST00000423487 LINC00116Q8NCU8 138 aa20.32■□□□□ 0.84
ABCA1-203ENST00000423487 FKBP5Q13451 457 aaPredicted RBP20.32■□□□□ 0.84
ABCA1-203ENST00000423487 CCDC125Q86Z20 511 aa20.32■□□□□ 0.84
ABCA1-203ENST00000423487 ZBTB1Q9Y2K1 713 aa20.32■□□□□ 0.84
ABCA1-203ENST00000423487 CACNA1FO60840 1977 aa20.32■□□□□ 0.84
ABCA1-203ENST00000423487 CNTNAP4Q9C0A0 1308 aa20.31■□□□□ 0.84
ABCA1-203ENST00000423487 TNS1Q9HBL0 1735 aaKnown RBP20.31■□□□□ 0.84
ABCA1-203ENST00000423487 NEFLP07196 543 aa20.31■□□□□ 0.84
ABCA1-203ENST00000423487 TRIM27P14373 513 aa20.31■□□□□ 0.84
ABCA1-203ENST00000423487 PDE3AQ14432 1141 aa20.31■□□□□ 0.84
ABCA1-203ENST00000423487 RC3H1Q5TC82 1133 aaKnown RBP20.31■□□□□ 0.84
ABCA1-203ENST00000423487 INTS5Q6P9B9 1019 aaKnown RBP20.31■□□□□ 0.84
ABCA1-203ENST00000423487 LRP10Q7Z4F1 713 aa20.31■□□□□ 0.84
ABCA1-203ENST00000423487 DDX58O95786 925 aaKnown RBP20.3■□□□□ 0.84
ABCA1-203ENST00000423487 IL6STP40189 918 aaPredicted RBP20.3■□□□□ 0.84
ABCA1-203ENST00000423487 NPM2Q86SE8 214 aaKnown RBP20.3■□□□□ 0.84
ABCA1-203ENST00000423487 LRRC4BQ9NT99 713 aa20.3■□□□□ 0.84
ABCA1-203ENST00000423487 BAG6P46379 1132 aa20.29■□□□□ 0.84
ABCA1-203ENST00000423487 COPS6Q7L5N1 327 aa20.29■□□□□ 0.84
ABCA1-203ENST00000423487 FTSJ3Q8IY81 847 aaKnown RBP20.29■□□□□ 0.84
ABCA1-203ENST00000423487 DZIP1LQ8IYY4 767 aaKnown RBP20.29■□□□□ 0.84
ABCA1-203ENST00000423487 XAGE3Q8WTP9 111 aa20.29■□□□□ 0.84
ABCA1-203ENST00000423487 EP400Q96L91 3159 aa20.29■□□□□ 0.84
ABCA1-203ENST00000423487 AIMP1Q12904 312 aaKnown RBP20.28■□□□□ 0.84
ABCA1-203ENST00000423487 PROM2Q8N271 834 aa20.28■□□□□ 0.84
ABCA1-203ENST00000423487 COL5A3P25940 1745 aaPredicted RBP20.28■□□□□ 0.84
ABCA1-203ENST00000423487 CLUAP1Q96AJ1 413 aa20.27■□□□□ 0.84
ABCA1-203ENST00000423487 ZNF330Q9Y3S2 320 aaPredicted RBP20.27■□□□□ 0.84
ABCA1-203ENST00000423487 EIF5P55010 431 aaKnown RBP20.27■□□□□ 0.83
ABCA1-203ENST00000423487 RGPD3A6NKT7 1758 aaPredicted RBP20.26■□□□□ 0.83
ABCA1-203ENST00000423487 RGPD4Q7Z3J3 1758 aa20.26■□□□□ 0.83
ABCA1-203ENST00000423487 EN1Q05925 392 aaPredicted RBP20.26■□□□□ 0.83
ABCA1-203ENST00000423487 C20orf194Q5TEA3 1177 aa20.26■□□□□ 0.83
ABCA1-203ENST00000423487 KSR2Q6VAB6 950 aa20.26■□□□□ 0.83
ABCA1-203ENST00000423487 CAMKK2Q96RR4 588 aa20.26■□□□□ 0.83
ABCA1-203ENST00000423487 TNNQ9UQP3 1299 aa20.26■□□□□ 0.83
ABCA1-203ENST00000423487 RREB1Q92766 1687 aa20.25■□□□□ 0.83
ABCA1-203ENST00000423487 ABCC4O15439 1325 aa20.25■□□□□ 0.83
ABCA1-203ENST00000423487 PI4KAP2A4QPH2 592 aa20.25■□□□□ 0.83
ABCA1-203ENST00000423487 RPS6KA4O75676 772 aa20.25■□□□□ 0.83
ABCA1-203ENST00000423487 ANKRD13DQ6ZTN6 518 aa20.25■□□□□ 0.83
ABCA1-203ENST00000423487 PI4KAP1Q8N8J0 262 aa20.25■□□□□ 0.83
ABCA1-203ENST00000423487 PANK1Q8TE04 598 aa20.25■□□□□ 0.83
ABCA1-203ENST00000423487 AK7Q96M32 723 aa20.25■□□□□ 0.83
ABCA1-203ENST00000423487 GNPATO15228 680 aa20.24■□□□□ 0.83
ABCA1-203ENST00000423487 RIC3Q7Z5B4 369 aa20.24■□□□□ 0.83
ABCA1-203ENST00000423487 PLBD2Q8NHP8 589 aa20.24■□□□□ 0.83
ABCA1-203ENST00000423487 DNAAF4Q8WXU2 420 aa20.24■□□□□ 0.83
ABCA1-203ENST00000423487 A0A087WZG4 1122 aa20.23■□□□□ 0.83
ABCA1-203ENST00000423487 F6X3S4 739 aa20.23■□□□□ 0.83
ABCA1-203ENST00000423487 RLBP1P12271 317 aa20.23■□□□□ 0.83
ABCA1-203ENST00000423487 IRX6P78412 446 aaPredicted RBP20.23■□□□□ 0.83
ABCA1-203ENST00000423487 EZH2Q15910 746 aaKnown RBP20.23■□□□□ 0.83
ABCA1-203ENST00000423487 KIF6Q6ZMV9 814 aa20.23■□□□□ 0.83
ABCA1-203ENST00000423487 TTLL7Q6ZT98 887 aa20.23■□□□□ 0.83
ABCA1-203ENST00000423487 RTCBQ9Y3I0 505 aaKnown RBP20.23■□□□□ 0.83
ABCA1-203ENST00000423487 TAF1LQ8IZX4 1826 aa20.23■□□□□ 0.83
ABCA1-203ENST00000423487 ADCY9O60503 1353 aa20.23■□□□□ 0.83
ABCA1-203ENST00000423487 C4BP0C0L5 1744 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms