RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 TSPYL4Q9UJ04 414 aa20.01■□□□□ 0.79
NPC1L1-203ENST00000423141 STAG3Q9UJ98 1225 aa20.01■□□□□ 0.79
NPC1L1-203ENST00000423141 LRRFIP2Q9Y608 721 aaKnown RBP20.01■□□□□ 0.79
NPC1L1-203ENST00000423141 GTPBP4Q9BZE4 634 aaKnown RBP20■□□□□ 0.79
NPC1L1-203ENST00000423141 PREX1Q8TCU6 1659 aa20■□□□□ 0.79
NPC1L1-203ENST00000423141 DIP2CQ9Y2E4 1556 aa20■□□□□ 0.79
NPC1L1-203ENST00000423141 ANKRD7Q92527 254 aa20■□□□□ 0.79
NPC1L1-203ENST00000423141 NUDT16Q96DE0 195 aaKnown RBP20■□□□□ 0.79
NPC1L1-203ENST00000423141 HSP90AB2PQ58FF8 381 aa19.99■□□□□ 0.79
NPC1L1-203ENST00000423141 SMC3Q9UQE7 1217 aa19.99■□□□□ 0.79
NPC1L1-203ENST00000423141 RAD50Q92878 1312 aa19.99■□□□□ 0.79
NPC1L1-203ENST00000423141 DIAPH3Q9NSV4 1193 aa19.98■□□□□ 0.79
NPC1L1-203ENST00000423141 CHAF1AQ13111 956 aaPredicted RBP19.98■□□□□ 0.79
NPC1L1-203ENST00000423141 PTGS1P23219 599 aa19.97■□□□□ 0.79
NPC1L1-203ENST00000423141 LIMCH1Q9UPQ0 1083 aa19.97■□□□□ 0.79
NPC1L1-203ENST00000423141 FLIIQ13045 1269 aa19.97■□□□□ 0.79
NPC1L1-203ENST00000423141 DLC1Q96QB1 1528 aa19.97■□□□□ 0.79
NPC1L1-203ENST00000423141 SOX12O15370 315 aa19.96■□□□□ 0.79
NPC1L1-203ENST00000423141 SGSM2O43147 1006 aa19.96■□□□□ 0.79
NPC1L1-203ENST00000423141 CTIFO43310 598 aaKnown RBP19.96■□□□□ 0.79
NPC1L1-203ENST00000423141 CCDC83Q8IWF9 413 aa19.96■□□□□ 0.79
NPC1L1-203ENST00000423141 LSG1Q9H089 658 aaKnown RBP19.96■□□□□ 0.79
NPC1L1-203ENST00000423141 SPG7Q9UQ90 795 aa19.96■□□□□ 0.79
NPC1L1-203ENST00000423141 CHMP3Q9Y3E7 222 aa19.96■□□□□ 0.79
NPC1L1-203ENST00000423141 GNAI3P08754 354 aa19.96■□□□□ 0.79
NPC1L1-203ENST00000423141 MTMR6Q9Y217 621 aa19.96■□□□□ 0.79
NPC1L1-203ENST00000423141 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.96■□□□□ 0.79
NPC1L1-203ENST00000423141 GJB2P29033 226 aa19.95■□□□□ 0.78
NPC1L1-203ENST00000423141 TXNDC2Q86VQ3 553 aa19.95■□□□□ 0.78
NPC1L1-203ENST00000423141 NRKQ7Z2Y5 1582 aa19.95■□□□□ 0.78
NPC1L1-203ENST00000423141 CASTP20810 708 aaKnown RBP19.94■□□□□ 0.78
NPC1L1-203ENST00000423141 MTHFSDQ2M296 383 aaKnown RBP19.94■□□□□ 0.78
NPC1L1-203ENST00000423141 PI4K2BQ8TCG2 481 aa19.94■□□□□ 0.78
NPC1L1-203ENST00000423141 STK31Q9BXU1 1019 aa19.94■□□□□ 0.78
NPC1L1-203ENST00000423141 LRMPQ12912 555 aa19.94■□□□□ 0.78
NPC1L1-203ENST00000423141 ATP6V1DQ9Y5K8 247 aa19.94■□□□□ 0.78
NPC1L1-203ENST00000423141 CCDC61Q9Y6R9 512 aa19.94■□□□□ 0.78
NPC1L1-203ENST00000423141 RIMBP3CA6NJZ7 1639 aa19.94■□□□□ 0.78
NPC1L1-203ENST00000423141 RIMBP3BA6NNM3 1639 aa19.94■□□□□ 0.78
NPC1L1-203ENST00000423141 RIMBP3Q9UFD9 1639 aa19.94■□□□□ 0.78
NPC1L1-203ENST00000423141 KIF20AO95235 890 aa19.93■□□□□ 0.78
NPC1L1-203ENST00000423141 NCBP1Q09161 790 aaKnown RBP19.93■□□□□ 0.78
NPC1L1-203ENST00000423141 CAMK4Q16566 473 aa19.93■□□□□ 0.78
NPC1L1-203ENST00000423141 CWC27Q6UX04 472 aaKnown RBP19.93■□□□□ 0.78
NPC1L1-203ENST00000423141 LUZP1Q86V48 1076 aa19.93■□□□□ 0.78
NPC1L1-203ENST00000423141 DDX54Q8TDD1 881 aaKnown RBP19.93■□□□□ 0.78
NPC1L1-203ENST00000423141 HYPKQ9NX55 129 aa19.93■□□□□ 0.78
NPC1L1-203ENST00000423141 VPS37CA5D8V6 355 aaPredicted RBP19.92■□□□□ 0.78
NPC1L1-203ENST00000423141 CCDC192P0DO97 292 aa19.92■□□□□ 0.78
NPC1L1-203ENST00000423141 USP44Q9H0E7 712 aa19.92■□□□□ 0.78
NPC1L1-203ENST00000423141 SOS1Q07889 1333 aaPredicted RBP19.92■□□□□ 0.78
NPC1L1-203ENST00000423141 MAP3K19Q56UN5 1328 aa19.92■□□□□ 0.78
NPC1L1-203ENST00000423141 NPM1P06748 294 aaKnown RBP eCLIP19.92■□□□□ 0.78
NPC1L1-203ENST00000423141 NAA30Q147X3 362 aaPredicted RBP19.92■□□□□ 0.78
NPC1L1-203ENST00000423141 C16orf45Q96MC5 204 aaPredicted RBP19.92■□□□□ 0.78
NPC1L1-203ENST00000423141 MON2Q7Z3U7 1717 aa19.92■□□□□ 0.78
NPC1L1-203ENST00000423141 AOX1Q06278 1338 aa19.92■□□□□ 0.78
NPC1L1-203ENST00000423141 TPM3P06753 285 aa19.91■□□□□ 0.78
NPC1L1-203ENST00000423141 ST3GAL1Q11201 340 aa19.91■□□□□ 0.78
NPC1L1-203ENST00000423141 ADCK5Q3MIX3 580 aa19.91■□□□□ 0.78
NPC1L1-203ENST00000423141 RTF1Q92541 710 aaKnown RBP19.91■□□□□ 0.78
NPC1L1-203ENST00000423141 NRBP1Q9UHY1 535 aa19.91■□□□□ 0.78
NPC1L1-203ENST00000423141 C3P01024 1663 aa19.91■□□□□ 0.78
NPC1L1-203ENST00000423141 GOLGA6L6A8MZA4 724 aa19.91■□□□□ 0.78
NPC1L1-203ENST00000423141 EPB41L2O43491 1005 aaKnown RBP19.91■□□□□ 0.78
NPC1L1-203ENST00000423141 FAM173BQ6P4H8 233 aa19.91■□□□□ 0.78
NPC1L1-203ENST00000423141 CCDC186Q7Z3E2 898 aa19.91■□□□□ 0.78
NPC1L1-203ENST00000423141 RIMS1Q86UR5 1692 aaKnown RBP19.91■□□□□ 0.78
NPC1L1-203ENST00000423141 PRR36Q9H6K5 1346 aa19.91■□□□□ 0.78
NPC1L1-203ENST00000423141 SURF6O75683 361 aaKnown RBP19.9■□□□□ 0.78
NPC1L1-203ENST00000423141 FAM200AQ8TCP9 573 aa19.9■□□□□ 0.78
NPC1L1-203ENST00000423141 MRVI1Q9Y6F6 885 aa19.9■□□□□ 0.78
NPC1L1-203ENST00000423141 LIG1P18858 919 aa19.9■□□□□ 0.78
NPC1L1-203ENST00000423141 TTC6Q86TZ1 520 aa19.9■□□□□ 0.78
NPC1L1-203ENST00000423141 BCL11BQ9C0K0 894 aaPredicted RBP19.9■□□□□ 0.78
NPC1L1-203ENST00000423141 FERMT3Q86UX7 667 aa19.9■□□□□ 0.78
NPC1L1-203ENST00000423141 CKAP2LQ8IYA6 745 aa19.9■□□□□ 0.78
NPC1L1-203ENST00000423141 NECAB1Q8N987 351 aa19.9■□□□□ 0.78
NPC1L1-203ENST00000423141 PPP1R42Q7Z4L9 355 aa19.89■□□□□ 0.77
NPC1L1-203ENST00000423141 METP08581 1390 aa19.89■□□□□ 0.77
NPC1L1-203ENST00000423141 UBTFL1P0CB47 393 aaPredicted RBP19.89■□□□□ 0.77
NPC1L1-203ENST00000423141 TYRO3Q06418 890 aa19.89■□□□□ 0.77
NPC1L1-203ENST00000423141 RHPN1Q8TCX5 695 aa19.89■□□□□ 0.77
NPC1L1-203ENST00000423141 SSH3Q8TE77 659 aa19.89■□□□□ 0.77
NPC1L1-203ENST00000423141 ARHGEF10O15013 1369 aa19.88■□□□□ 0.77
NPC1L1-203ENST00000423141 PTH1RQ03431 593 aa19.88■□□□□ 0.77
NPC1L1-203ENST00000423141 JAKMIP1Q96N16 626 aaKnown RBP19.88■□□□□ 0.77
NPC1L1-203ENST00000423141 XRN1Q8IZH2 1706 aaKnown RBP19.88■□□□□ 0.77
NPC1L1-203ENST00000423141 PEAK1Q9H792 1746 aa19.88■□□□□ 0.77
NPC1L1-203ENST00000423141 SETD1AO15047 1707 aaKnown RBP19.87■□□□□ 0.77
NPC1L1-203ENST00000423141 COL9A3Q14050 684 aaPredicted RBP19.87■□□□□ 0.77
NPC1L1-203ENST00000423141 MAP3K11Q16584 847 aa19.87■□□□□ 0.77
NPC1L1-203ENST00000423141 PDRG1Q9NUG6 133 aa19.87■□□□□ 0.77
NPC1L1-203ENST00000423141 NUTM2FA1L443 756 aa19.87■□□□□ 0.77
NPC1L1-203ENST00000423141 ME3Q16798 604 aa19.87■□□□□ 0.77
NPC1L1-203ENST00000423141 PRPF40BQ6NWY9 871 aaKnown RBP19.87■□□□□ 0.77
NPC1L1-203ENST00000423141 NUP62CLQ9H1M0 184 aa19.87■□□□□ 0.77
NPC1L1-203ENST00000423141 CCDC30Q5VVM6 783 aa19.86■□□□□ 0.77
NPC1L1-203ENST00000423141 DRC7Q8IY82 874 aa19.86■□□□□ 0.77
NPC1L1-203ENST00000423141 CNTROBQ8N137 903 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms