RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 EDC4Q6P2E9 1401 aaKnown RBP10.66□□□□□ -0.7
HLA-DQA1-204ENST00000422863 A0A1W2PP64 1363 aa10.65□□□□□ -0.7
HLA-DQA1-204ENST00000422863 FCHSD2O94868 740 aa10.65□□□□□ -0.7
HLA-DQA1-204ENST00000422863 TATP17735 454 aaPredicted RBP10.65□□□□□ -0.7
HLA-DQA1-204ENST00000422863 NEUROD1Q13562 356 aa10.65□□□□□ -0.7
HLA-DQA1-204ENST00000422863 RBM46Q8TBY0 533 aaKnown RBP10.65□□□□□ -0.7
HLA-DQA1-204ENST00000422863 RAPGEF4Q8WZA2 1011 aa10.65□□□□□ -0.7
HLA-DQA1-204ENST00000422863 KCPQ6ZWJ8 1503 aa10.64□□□□□ -0.71
HLA-DQA1-204ENST00000422863 PXDNLA1KZ92 1463 aa10.64□□□□□ -0.71
HLA-DQA1-204ENST00000422863 GNPATO15228 680 aa10.64□□□□□ -0.71
HLA-DQA1-204ENST00000422863 MMP10P09238 476 aa10.64□□□□□ -0.71
HLA-DQA1-204ENST00000422863 DPEP1P16444 411 aa10.64□□□□□ -0.71
HLA-DQA1-204ENST00000422863 MKRN3Q13064 507 aaKnown RBP10.64□□□□□ -0.71
HLA-DQA1-204ENST00000422863 C9orf131Q5VYM1 1079 aa10.64□□□□□ -0.71
HLA-DQA1-204ENST00000422863 PIGBQ92521 554 aa10.64□□□□□ -0.71
HLA-DQA1-204ENST00000422863 COG3Q96JB2 828 aa10.64□□□□□ -0.71
HLA-DQA1-204ENST00000422863 TERF2IPQ9NYB0 399 aa10.64□□□□□ -0.71
HLA-DQA1-204ENST00000422863 CYP27B1O15528 508 aa10.63□□□□□ -0.71
HLA-DQA1-204ENST00000422863 SMARCC1Q92922 1105 aaPredicted RBP10.63□□□□□ -0.71
HLA-DQA1-204ENST00000422863 LOC102724428A0A0B4J2F2 783 aa10.62□□□□□ -0.71
HLA-DQA1-204ENST00000422863 SSFA2P28290 1259 aa10.62□□□□□ -0.71
HLA-DQA1-204ENST00000422863 SIK1P57059 783 aa10.62□□□□□ -0.71
HLA-DQA1-204ENST00000422863 ITPK1Q13572 414 aa10.62□□□□□ -0.71
HLA-DQA1-204ENST00000422863 PCDH11XQ9BZA7 1347 aa10.61□□□□□ -0.71
HLA-DQA1-204ENST00000422863 PCDH11YQ9BZA8 1340 aa10.61□□□□□ -0.71
HLA-DQA1-204ENST00000422863 MYH14Q7Z406 1995 aaKnown RBP10.61□□□□□ -0.71
HLA-DQA1-204ENST00000422863 TNRC6CQ9HCJ0 1690 aaKnown RBP10.61□□□□□ -0.71
HLA-DQA1-204ENST00000422863 HSPA1AP0DMV8 641 aaKnown RBP10.61□□□□□ -0.71
HLA-DQA1-204ENST00000422863 HSPA1BP0DMV9 641 aaKnown RBP10.61□□□□□ -0.71
HLA-DQA1-204ENST00000422863 ATP6V1AP38606 617 aa10.61□□□□□ -0.71
HLA-DQA1-204ENST00000422863 TGFB2P61812 414 aa10.61□□□□□ -0.71
HLA-DQA1-204ENST00000422863 FSTL1Q12841 308 aa10.61□□□□□ -0.71
HLA-DQA1-204ENST00000422863 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.61□□□□□ -0.71
HLA-DQA1-204ENST00000422863 ASAP1Q9ULH1 1129 aa10.61□□□□□ -0.71
HLA-DQA1-204ENST00000422863 C4AP0C0L4 1744 aa10.61□□□□□ -0.71
HLA-DQA1-204ENST00000422863 HMGB2P26583 209 aaKnown RBP10.6□□□□□ -0.71
HLA-DQA1-204ENST00000422863 GOLGA2Q08379 1002 aa10.6□□□□□ -0.71
HLA-DQA1-204ENST00000422863 HSP90AB2PQ58FF8 381 aa10.6□□□□□ -0.71
HLA-DQA1-204ENST00000422863 GGNBP2Q9H3C7 697 aa10.6□□□□□ -0.71
HLA-DQA1-204ENST00000422863 RNF181Q9P0P0 153 aa10.6□□□□□ -0.71
HLA-DQA1-204ENST00000422863 CGNL1Q0VF96 1302 aa10.59□□□□□ -0.71
HLA-DQA1-204ENST00000422863 KCNA3P22001 575 aa10.59□□□□□ -0.71
HLA-DQA1-204ENST00000422863 TMF1P82094 1093 aa10.59□□□□□ -0.71
HLA-DQA1-204ENST00000422863 TRAPPC3LQ5T215 181 aa10.59□□□□□ -0.71
HLA-DQA1-204ENST00000422863 DCAF8Q5TAQ9 597 aa10.59□□□□□ -0.71
HLA-DQA1-204ENST00000422863 ZNF710Q8N1W2 664 aa10.59□□□□□ -0.71
HLA-DQA1-204ENST00000422863 CARD11Q9BXL7 1154 aa10.59□□□□□ -0.71
HLA-DQA1-204ENST00000422863 KDM2BQ8NHM5 1336 aa10.58□□□□□ -0.71
HLA-DQA1-204ENST00000422863 NSD3Q9BZ95 1437 aa10.58□□□□□ -0.72
HLA-DQA1-204ENST00000422863 KIF20BQ96Q89 1820 aa10.58□□□□□ -0.72
HLA-DQA1-204ENST00000422863 CCDC87Q9NVE4 849 aa10.58□□□□□ -0.72
HLA-DQA1-204ENST00000422863 ARHGEF1Q92888 912 aaKnown RBP10.57□□□□□ -0.72
HLA-DQA1-204ENST00000422863 TMOD3Q9NYL9 352 aa10.57□□□□□ -0.72
HLA-DQA1-204ENST00000422863 PARP3Q9Y6F1 533 aa10.57□□□□□ -0.72
HLA-DQA1-204ENST00000422863 C10orf71Q711Q0 1435 aa10.57□□□□□ -0.72
HLA-DQA1-204ENST00000422863 SMG6Q86US8 1419 aaKnown RBP10.57□□□□□ -0.72
HLA-DQA1-204ENST00000422863 AFDNP55196 1824 aaKnown RBP10.56□□□□□ -0.72
HLA-DQA1-204ENST00000422863 COL5A3P25940 1745 aaPredicted RBP10.56□□□□□ -0.72
HLA-DQA1-204ENST00000422863 PLEKHG2Q9H7P9 1386 aa10.56□□□□□ -0.72
HLA-DQA1-204ENST00000422863 CHRNA5P30532 468 aa10.56□□□□□ -0.72
HLA-DQA1-204ENST00000422863 NLGN1Q8N2Q7 840 aa10.56□□□□□ -0.72
HLA-DQA1-204ENST00000422863 SMC1BQ8NDV3 1235 aa10.56□□□□□ -0.72
HLA-DQA1-204ENST00000422863 PIM2Q9P1W9 311 aa10.56□□□□□ -0.72
HLA-DQA1-204ENST00000422863 RTCBQ9Y3I0 505 aaKnown RBP10.56□□□□□ -0.72
HLA-DQA1-204ENST00000422863 FYB1O15117 783 aa10.55□□□□□ -0.72
HLA-DQA1-204ENST00000422863 GYS1P13807 737 aa10.55□□□□□ -0.72
HLA-DQA1-204ENST00000422863 RASSF7Q02833 373 aa10.55□□□□□ -0.72
HLA-DQA1-204ENST00000422863 DALRD3Q5D0E6 543 aaKnown RBP10.55□□□□□ -0.72
HLA-DQA1-204ENST00000422863 VARS2Q5ST30 1063 aaKnown RBP10.55□□□□□ -0.72
HLA-DQA1-204ENST00000422863 SLC4A9Q96Q91 983 aa10.55□□□□□ -0.72
HLA-DQA1-204ENST00000422863 ATG3Q9NT62 314 aa10.55□□□□□ -0.72
HLA-DQA1-204ENST00000422863 RTL1A6NKG5 1358 aa10.54□□□□□ -0.72
HLA-DQA1-204ENST00000422863 RFC4P35249 363 aa10.54□□□□□ -0.72
HLA-DQA1-204ENST00000422863 NKX1-1Q15270 411 aaPredicted RBP10.54□□□□□ -0.72
HLA-DQA1-204ENST00000422863 DOK7Q18PE1 504 aa10.54□□□□□ -0.72
HLA-DQA1-204ENST00000422863 DCAF5Q96JK2 942 aa10.54□□□□□ -0.72
HLA-DQA1-204ENST00000422863 SRP68Q9UHB9 627 aaKnown RBP10.54□□□□□ -0.72
HLA-DQA1-204ENST00000422863 INSRP06213 1382 aa10.53□□□□□ -0.72
HLA-DQA1-204ENST00000422863 TIAM2Q8IVF5 1701 aa10.53□□□□□ -0.72
HLA-DQA1-204ENST00000422863 PPM1GO15355 546 aaPredicted RBP10.53□□□□□ -0.72
HLA-DQA1-204ENST00000422863 SPG7Q9UQ90 795 aa10.53□□□□□ -0.72
HLA-DQA1-204ENST00000422863 EMILIN1Q9Y6C2 1016 aa10.53□□□□□ -0.72
HLA-DQA1-204ENST00000422863 CACNA1SQ13698 1873 aa10.53□□□□□ -0.72
HLA-DQA1-204ENST00000422863 DICER1Q9UPY3 1922 aaKnown RBP10.52□□□□□ -0.72
HLA-DQA1-204ENST00000422863 DPY19L2Q6NUT2 758 aa10.52□□□□□ -0.73
HLA-DQA1-204ENST00000422863 ZNF687Q8N1G0 1237 aa10.52□□□□□ -0.73
HLA-DQA1-204ENST00000422863 MKRN1Q9UHC7 482 aaKnown RBP10.52□□□□□ -0.73
HLA-DQA1-204ENST00000422863 VEGFAP15692 232 aaPredicted RBP10.51□□□□□ -0.73
HLA-DQA1-204ENST00000422863 FKBP8Q14318 412 aa10.51□□□□□ -0.73
HLA-DQA1-204ENST00000422863 FLT4P35916 1363 aa10.51□□□□□ -0.73
HLA-DQA1-204ENST00000422863 ST20-MTHFSA0A0A6YYL1 179 aa10.5□□□□□ -0.73
HLA-DQA1-204ENST00000422863 RPS6KA4O75676 772 aa10.5□□□□□ -0.73
HLA-DQA1-204ENST00000422863 SLC34A2O95436 690 aa10.5□□□□□ -0.73
HLA-DQA1-204ENST00000422863 PHKG2P15735 406 aa10.5□□□□□ -0.73
HLA-DQA1-204ENST00000422863 DDR1Q08345 913 aa10.5□□□□□ -0.73
HLA-DQA1-204ENST00000422863 ZNF467Q7Z7K2 595 aaPredicted RBP10.5□□□□□ -0.73
HLA-DQA1-204ENST00000422863 IFNL2Q8IZJ0 200 aa10.5□□□□□ -0.73
HLA-DQA1-204ENST00000422863 PUS7Q96PZ0 661 aaKnown RBP10.5□□□□□ -0.73
HLA-DQA1-204ENST00000422863 EYA1Q99502 592 aa10.5□□□□□ -0.73
HLA-DQA1-204ENST00000422863 VIRMAQ69YN4 1812 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms