RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 RRS1Q15050 365 aaKnown RBP17■□□□□ 0.31
UFD1-203ENST00000421968 GPR101Q96P66 508 aaPredicted RBP17■□□□□ 0.31
UFD1-203ENST00000421968 TERF2IPQ9NYB0 399 aa17■□□□□ 0.31
UFD1-203ENST00000421968 MYH14Q7Z406 1995 aaKnown RBP16.99■□□□□ 0.31
UFD1-203ENST00000421968 ECE1P42892 770 aa16.99■□□□□ 0.31
UFD1-203ENST00000421968 SCN4AP35499 1836 aa16.98■□□□□ 0.31
UFD1-203ENST00000421968 TM4SF1P30408 202 aa16.98■□□□□ 0.31
UFD1-203ENST00000421968 C2CD5Q86YS7 1000 aa16.98■□□□□ 0.31
UFD1-203ENST00000421968 CNTROBQ8N137 903 aa16.98■□□□□ 0.31
UFD1-203ENST00000421968 SPG7Q9UQ90 795 aa16.98■□□□□ 0.31
UFD1-203ENST00000421968 A0A1W2PP64 1363 aa16.98■□□□□ 0.31
UFD1-203ENST00000421968 DLEC1Q9Y238 1755 aa16.97■□□□□ 0.31
UFD1-203ENST00000421968 THSD7BQ9C0I4 1608 aa16.97■□□□□ 0.31
UFD1-203ENST00000421968 COL5A3P25940 1745 aaPredicted RBP16.97■□□□□ 0.31
UFD1-203ENST00000421968 CYP4F22Q6NT55 531 aa16.97■□□□□ 0.31
UFD1-203ENST00000421968 MAP1SQ66K74 1059 aaPredicted RBP16.96■□□□□ 0.31
UFD1-203ENST00000421968 L3MBTL3Q96JM7 780 aaPredicted RBP16.96■□□□□ 0.31
UFD1-203ENST00000421968 H0YIN7 160 aa16.95■□□□□ 0.3
UFD1-203ENST00000421968 C21orf2O43822 256 aa16.95■□□□□ 0.3
UFD1-203ENST00000421968 ZNF831Q5JPB2 1677 aa16.94■□□□□ 0.3
UFD1-203ENST00000421968 LTBP1Q14766 1721 aa16.94■□□□□ 0.3
UFD1-203ENST00000421968 CA12O43570 354 aa16.94■□□□□ 0.3
UFD1-203ENST00000421968 HSP90AB2PQ58FF8 381 aa16.94■□□□□ 0.3
UFD1-203ENST00000421968 GCC1Q96CN9 775 aa16.94■□□□□ 0.3
UFD1-203ENST00000421968 AFDNP55196 1824 aaKnown RBP16.93■□□□□ 0.3
UFD1-203ENST00000421968 FER1L6Q2WGJ9 1857 aa16.93■□□□□ 0.3
UFD1-203ENST00000421968 CRKLP46109 303 aaKnown RBP16.93■□□□□ 0.3
UFD1-203ENST00000421968 TAOK3Q9H2K8 898 aa16.93■□□□□ 0.3
UFD1-203ENST00000421968 HACL1Q9UJ83 578 aa16.93■□□□□ 0.3
UFD1-203ENST00000421968 AOC2O75106 756 aa16.92■□□□□ 0.3
UFD1-203ENST00000421968 ZPR1O75312 459 aa16.92■□□□□ 0.3
UFD1-203ENST00000421968 EPHX2P34913 555 aa16.92■□□□□ 0.3
UFD1-203ENST00000421968 DDX21Q9NR30 783 aaKnown RBP eCLIP16.92■□□□□ 0.3
UFD1-203ENST00000421968 INSRP06213 1382 aa16.91■□□□□ 0.3
UFD1-203ENST00000421968 MAP2K2P36507 400 aa16.91■□□□□ 0.3
UFD1-203ENST00000421968 USPL1Q5W0Q7 1092 aa16.91■□□□□ 0.3
UFD1-203ENST00000421968 PNMA8AQ86V59 439 aaPredicted RBP16.91■□□□□ 0.3
UFD1-203ENST00000421968 IFNL2Q8IZJ0 200 aa16.91■□□□□ 0.3
UFD1-203ENST00000421968 ZNF622Q969S3 477 aaKnown RBP eCLIP16.91■□□□□ 0.3
UFD1-203ENST00000421968 LTBP3Q9NS15 1303 aa16.91■□□□□ 0.3
UFD1-203ENST00000421968 PHKG2P15735 406 aa16.9■□□□□ 0.3
UFD1-203ENST00000421968 NFIXQ14938 502 aa16.9■□□□□ 0.3
UFD1-203ENST00000421968 ADAMTSL1Q8N6G6 1762 aa16.89■□□□□ 0.3
UFD1-203ENST00000421968 SERPINB2P05120 415 aa16.89■□□□□ 0.29
UFD1-203ENST00000421968 ROCK2O75116 1388 aaKnown RBP16.88■□□□□ 0.29
UFD1-203ENST00000421968 PTCD1O75127 700 aaKnown RBP16.87■□□□□ 0.29
UFD1-203ENST00000421968 HABP4Q5JVS0 413 aaKnown RBP16.87■□□□□ 0.29
UFD1-203ENST00000421968 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.87■□□□□ 0.29
UFD1-203ENST00000421968 NRXN2Q9P2S2 1712 aa16.87■□□□□ 0.29
UFD1-203ENST00000421968 FMR1Q06787 632 aaKnown RBP eCLIP16.86■□□□□ 0.29
UFD1-203ENST00000421968 NBPF15Q8N660 670 aa16.86■□□□□ 0.29
UFD1-203ENST00000421968 FLT4P35916 1363 aa16.86■□□□□ 0.29
UFD1-203ENST00000421968 CARMIL3Q8ND23 1372 aa16.86■□□□□ 0.29
UFD1-203ENST00000421968 RNF123Q5XPI4 1314 aa16.85■□□□□ 0.29
UFD1-203ENST00000421968 ERVV-2B6SEH9 535 aa16.84■□□□□ 0.29
UFD1-203ENST00000421968 BRPF1P55201 1214 aaPredicted RBP16.84■□□□□ 0.29
UFD1-203ENST00000421968 TLL2Q9Y6L7 1015 aa16.84■□□□□ 0.29
UFD1-203ENST00000421968 ZNF541Q9H0D2 1346 aa16.84■□□□□ 0.29
UFD1-203ENST00000421968 ADAMTS7Q9UKP4 1686 aa16.82■□□□□ 0.28
UFD1-203ENST00000421968 CST9Q5W186 159 aa16.82■□□□□ 0.28
UFD1-203ENST00000421968 INTS5Q6P9B9 1019 aaKnown RBP16.82■□□□□ 0.28
UFD1-203ENST00000421968 GGNBP2Q9H3C7 697 aa16.82■□□□□ 0.28
UFD1-203ENST00000421968 PDZRN3Q9UPQ7 1066 aa16.82■□□□□ 0.28
UFD1-203ENST00000421968 TRPM7Q96QT4 1865 aa16.82■□□□□ 0.28
UFD1-203ENST00000421968 CIAPIN1Q6FI81 312 aa16.81■□□□□ 0.28
UFD1-203ENST00000421968 NARFQ9UHQ1 456 aa16.81■□□□□ 0.28
UFD1-203ENST00000421968 NCAPD2Q15021 1401 aa16.8■□□□□ 0.28
UFD1-203ENST00000421968 TONSLQ96HA7 1378 aa16.8■□□□□ 0.28
UFD1-203ENST00000421968 PDE6BP35913 854 aa16.8■□□□□ 0.28
UFD1-203ENST00000421968 CABP4P57796 275 aa16.8■□□□□ 0.28
UFD1-203ENST00000421968 SOGA3Q5TF21 947 aa16.8■□□□□ 0.28
UFD1-203ENST00000421968 KIF24Q5T7B8 1368 aa16.79■□□□□ 0.28
UFD1-203ENST00000421968 TRAF5O00463 557 aa16.79■□□□□ 0.28
UFD1-203ENST00000421968 DLL1O00548 723 aa16.79■□□□□ 0.28
UFD1-203ENST00000421968 SOS1Q07889 1333 aaPredicted RBP16.78■□□□□ 0.28
UFD1-203ENST00000421968 SLX4Q8IY92 1834 aa16.78■□□□□ 0.28
UFD1-203ENST00000421968 FYB1O15117 783 aa16.78■□□□□ 0.28
UFD1-203ENST00000421968 BICDL1Q6ZP65 573 aa16.78■□□□□ 0.28
UFD1-203ENST00000421968 CNKSR1Q969H4 720 aa16.78■□□□□ 0.28
UFD1-203ENST00000421968 L3MBTL2Q969R5 705 aa16.78■□□□□ 0.28
UFD1-203ENST00000421968 BRIP1Q9BX63 1249 aa16.78■□□□□ 0.28
UFD1-203ENST00000421968 BCL2L12Q9HB09 334 aa16.78■□□□□ 0.28
UFD1-203ENST00000421968 ANKRD31Q8N7Z5 1873 aa16.78■□□□□ 0.28
UFD1-203ENST00000421968 PRPF40BQ6NWY9 871 aaKnown RBP16.77■□□□□ 0.28
UFD1-203ENST00000421968 SAPCD2Q86UD0 394 aa16.77■□□□□ 0.28
UFD1-203ENST00000421968 CACNA1SQ13698 1873 aa16.77■□□□□ 0.27
UFD1-203ENST00000421968 COL11A2P13942 1736 aaPredicted RBP16.76■□□□□ 0.27
UFD1-203ENST00000421968 TJP1Q07157 1748 aa16.76■□□□□ 0.27
UFD1-203ENST00000421968 HSP90AB1P08238 724 aaKnown RBP16.76■□□□□ 0.27
UFD1-203ENST00000421968 CCDC24Q8N4L8 307 aa16.76■□□□□ 0.27
UFD1-203ENST00000421968 EYA1Q99502 592 aa16.76■□□□□ 0.27
UFD1-203ENST00000421968 FXR1P51114 621 aaKnown RBP eCLIP16.75■□□□□ 0.27
UFD1-203ENST00000421968 PUS7Q96PZ0 661 aaKnown RBP16.75■□□□□ 0.27
UFD1-203ENST00000421968 ZNF277Q9NRM2 450 aaPredicted RBP16.75■□□□□ 0.27
UFD1-203ENST00000421968 EMILIN1Q9Y6C2 1016 aa16.75■□□□□ 0.27
UFD1-203ENST00000421968 PPM1GO15355 546 aaPredicted RBP16.74■□□□□ 0.27
UFD1-203ENST00000421968 GPC2Q8N158 579 aa16.74■□□□□ 0.27
UFD1-203ENST00000421968 COL15A1P39059 1388 aa16.74■□□□□ 0.27
UFD1-203ENST00000421968 LMOD1P29536 600 aaPredicted RBP16.73■□□□□ 0.27
UFD1-203ENST00000421968 CCDC93Q567U6 631 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms