RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 PCMTD1Q96MG8 357 aaPredicted RBP9.74□□□□□ -0.85
SFXN1-202ENST00000421887 ZCCHC2Q9C0B9 1178 aaKnown RBP9.74□□□□□ -0.85
SFXN1-202ENST00000421887 PCDHGC4Q9Y5F7 938 aa9.74□□□□□ -0.85
SFXN1-202ENST00000421887 PDS5BQ9NTI5 1447 aa9.73□□□□□ -0.85
SFXN1-202ENST00000421887 BAZ1AQ9NRL2 1556 aaPredicted RBP9.73□□□□□ -0.85
SFXN1-202ENST00000421887 PLA2G4AP47712 749 aa9.73□□□□□ -0.85
SFXN1-202ENST00000421887 TBC1D9Q6ZT07 1266 aa9.73□□□□□ -0.85
SFXN1-202ENST00000421887 KRTAP1-3Q8IUG1 177 aa9.73□□□□□ -0.85
SFXN1-202ENST00000421887 BAZ1BQ9UIG0 1483 aaKnown RBP9.72□□□□□ -0.85
SFXN1-202ENST00000421887 STAU1O95793 577 aaKnown RBP9.72□□□□□ -0.85
SFXN1-202ENST00000421887 ADH6P28332 368 aa9.72□□□□□ -0.85
SFXN1-202ENST00000421887 TLR1Q15399 786 aa9.72□□□□□ -0.85
SFXN1-202ENST00000421887 CCDC85AQ96PX6 553 aaPredicted RBP9.72□□□□□ -0.85
SFXN1-202ENST00000421887 PLVAPQ9BX97 442 aa9.72□□□□□ -0.85
SFXN1-202ENST00000421887 DCDC2BA2VCK2 349 aa9.71□□□□□ -0.86
SFXN1-202ENST00000421887 PPARGC1BQ86YN6 1023 aaKnown RBP9.71□□□□□ -0.86
SFXN1-202ENST00000421887 AIDAQ96BJ3 306 aa9.71□□□□□ -0.86
SFXN1-202ENST00000421887 TRIM11Q96F44 468 aa9.71□□□□□ -0.86
SFXN1-202ENST00000421887 ATXN7O15265 892 aaPredicted RBP9.7□□□□□ -0.86
SFXN1-202ENST00000421887 CD33P20138 364 aa9.7□□□□□ -0.86
SFXN1-202ENST00000421887 FCHSD1Q86WN1 690 aa9.7□□□□□ -0.86
SFXN1-202ENST00000421887 DNAAF2Q9NVR5 837 aaKnown RBP9.7□□□□□ -0.86
SFXN1-202ENST00000421887 KLF15Q9UIH9 416 aa9.7□□□□□ -0.86
SFXN1-202ENST00000421887 SMARCA4P51532 1647 aa9.7□□□□□ -0.86
SFXN1-202ENST00000421887 SPATA31C1P0DKV0 1188 aa9.69□□□□□ -0.86
SFXN1-202ENST00000421887 ETNK1Q9HBU6 452 aa9.69□□□□□ -0.86
SFXN1-202ENST00000421887 CEP126Q9P2H0 1117 aa9.69□□□□□ -0.86
SFXN1-202ENST00000421887 MAPTP10636 758 aaKnown RBP9.68□□□□□ -0.86
SFXN1-202ENST00000421887 PCBP4P57723 403 aaKnown RBP9.68□□□□□ -0.86
SFXN1-202ENST00000421887 RSPO4Q2I0M5 234 aaPredicted RBP9.68□□□□□ -0.86
SFXN1-202ENST00000421887 KHNYNO15037 678 aaKnown RBP9.67□□□□□ -0.86
SFXN1-202ENST00000421887 ARSJQ5FYB0 599 aaPredicted RBP9.67□□□□□ -0.86
SFXN1-202ENST00000421887 NLRP8Q86W28 1048 aa9.67□□□□□ -0.86
SFXN1-202ENST00000421887 PRR12Q9ULL5 1215 aa9.67□□□□□ -0.86
SFXN1-202ENST00000421887 FOXD4L6Q3SYB3 417 aaPredicted RBP9.66□□□□□ -0.86
SFXN1-202ENST00000421887 FOXD4L3Q6VB84 417 aaPredicted RBP9.66□□□□□ -0.86
SFXN1-202ENST00000421887 MRC2Q9UBG0 1479 aa9.66□□□□□ -0.86
SFXN1-202ENST00000421887 ATP4AP20648 1035 aa9.65□□□□□ -0.86
SFXN1-202ENST00000421887 TNP2Q05952 138 aa9.65□□□□□ -0.86
SFXN1-202ENST00000421887 USP4Q13107 963 aa9.65□□□□□ -0.86
SFXN1-202ENST00000421887 TSGA10IPQ3SY00 556 aa9.65□□□□□ -0.86
SFXN1-202ENST00000421887 TPSG1Q9NRR2 321 aa9.65□□□□□ -0.86
SFXN1-202ENST00000421887 HCN2Q9UL51 889 aa9.65□□□□□ -0.86
SFXN1-202ENST00000421887 A0A1W2PNR3 127 aa9.64□□□□□ -0.87
SFXN1-202ENST00000421887 NKAPLQ5M9Q1 402 aa9.64□□□□□ -0.87
SFXN1-202ENST00000421887 FAM182BQ5T319 152 aa9.64□□□□□ -0.87
SFXN1-202ENST00000421887 C1orf216Q8TAB5 229 aa9.64□□□□□ -0.87
SFXN1-202ENST00000421887 ZFP64Q9NPA5 681 aa9.64□□□□□ -0.87
SFXN1-202ENST00000421887 AVENQ9NQS1 362 aaPredicted RBP9.64□□□□□ -0.87
SFXN1-202ENST00000421887 DOLKQ9UPQ8 538 aa9.64□□□□□ -0.87
SFXN1-202ENST00000421887 WDR62O43379 1518 aa9.63□□□□□ -0.87
SFXN1-202ENST00000421887 APBA3O96018 575 aa9.63□□□□□ -0.87
SFXN1-202ENST00000421887 PRRT3Q5FWE3 981 aa9.63□□□□□ -0.87
SFXN1-202ENST00000421887 NBPF11Q86T75 865 aa9.63□□□□□ -0.87
SFXN1-202ENST00000421887 NIFKQ9BYG3 293 aaKnown RBP9.63□□□□□ -0.87
SFXN1-202ENST00000421887 GOPCQ9HD26 462 aa9.63□□□□□ -0.87
SFXN1-202ENST00000421887 NDUFB9Q9Y6M9 179 aa9.63□□□□□ -0.87
SFXN1-202ENST00000421887 SPDYE3A6NKU9 549 aa9.62□□□□□ -0.87
SFXN1-202ENST00000421887 OXLD1Q5BKU9 147 aa9.62□□□□□ -0.87
SFXN1-202ENST00000421887 LCE3BQ5TA77 95 aa9.62□□□□□ -0.87
SFXN1-202ENST00000421887 GJA3Q9Y6H8 435 aa9.62□□□□□ -0.87
SFXN1-202ENST00000421887 RIMBP3CA6NJZ7 1639 aa9.61□□□□□ -0.87
SFXN1-202ENST00000421887 RIMBP3BA6NNM3 1639 aa9.61□□□□□ -0.87
SFXN1-202ENST00000421887 RIMBP3Q9UFD9 1639 aa9.61□□□□□ -0.87
SFXN1-202ENST00000421887 GPR37L1O60883 481 aa9.61□□□□□ -0.87
SFXN1-202ENST00000421887 ARTNQ5T4W7 220 aa9.61□□□□□ -0.87
SFXN1-202ENST00000421887 ZNF468Q5VIY5 522 aaPredicted RBP9.61□□□□□ -0.87
SFXN1-202ENST00000421887 DYRK3O43781 588 aa9.6□□□□□ -0.87
SFXN1-202ENST00000421887 ALAS2P22557 587 aa9.6□□□□□ -0.87
SFXN1-202ENST00000421887 FAM229AH3BQW9 127 aa9.59□□□□□ -0.87
SFXN1-202ENST00000421887 GDF10P55107 478 aa9.59□□□□□ -0.87
SFXN1-202ENST00000421887 NBPF1Q3BBV0 1214 aa9.59□□□□□ -0.87
SFXN1-202ENST00000421887 INHAP05111 366 aa9.58□□□□□ -0.88
SFXN1-202ENST00000421887 TATP17735 454 aaPredicted RBP9.58□□□□□ -0.88
SFXN1-202ENST00000421887 SLFNL1Q499Z3 407 aa9.58□□□□□ -0.88
SFXN1-202ENST00000421887 PRSS36Q5K4E3 855 aa9.58□□□□□ -0.88
SFXN1-202ENST00000421887 MARK1Q9P0L2 795 aa9.58□□□□□ -0.88
SFXN1-202ENST00000421887 PEG3Q9GZU2 1588 aa9.58□□□□□ -0.88
SFXN1-202ENST00000421887 ELOA3CA0A087WX78 387 aaPredicted RBP9.57□□□□□ -0.88
SFXN1-202ENST00000421887 ELOA3DA6NLF2 546 aaPredicted RBP9.57□□□□□ -0.88
SFXN1-202ENST00000421887 ELOA3BQ3SY89 546 aa9.57□□□□□ -0.88
SFXN1-202ENST00000421887 MTMR14Q8NCE2 650 aa9.57□□□□□ -0.88
SFXN1-202ENST00000421887 ELOA3Q8NG57 546 aa9.57□□□□□ -0.88
SFXN1-202ENST00000421887 SIRT1Q96EB6 747 aa9.57□□□□□ -0.88
SFXN1-202ENST00000421887 KRTAP4-12Q9BQ66 201 aa9.57□□□□□ -0.88
SFXN1-202ENST00000421887 CADPSQ9ULU8 1353 aa9.57□□□□□ -0.88
SFXN1-202ENST00000421887 FAM157BP0CG42 384 aa9.56□□□□□ -0.88
SFXN1-202ENST00000421887 SCNN1DP51172 638 aa9.56□□□□□ -0.88
SFXN1-202ENST00000421887 ZIC5Q96T25 663 aa9.56□□□□□ -0.88
SFXN1-202ENST00000421887 STRN4Q9NRL3 753 aa9.56□□□□□ -0.88
SFXN1-202ENST00000421887 SERTAD1Q9UHV2 236 aa9.56□□□□□ -0.88
SFXN1-202ENST00000421887 CEP164Q9UPV0 1460 aa9.55□□□□□ -0.88
SFXN1-202ENST00000421887 SMTNP53814 917 aa9.55□□□□□ -0.88
SFXN1-202ENST00000421887 BICDL1Q6ZP65 573 aa9.55□□□□□ -0.88
SFXN1-202ENST00000421887 SYT9Q86SS6 491 aa9.55□□□□□ -0.88
SFXN1-202ENST00000421887 TRIM28Q13263 835 aaKnown RBP9.54□□□□□ -0.88
SFXN1-202ENST00000421887 PHTF2Q8N3S3 785 aa9.54□□□□□ -0.88
SFXN1-202ENST00000421887 IL27Q8NEV9 243 aa9.54□□□□□ -0.88
SFXN1-202ENST00000421887 M0R082 166 aa9.53□□□□□ -0.88
SFXN1-202ENST00000421887 APBB1O00213 710 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms