RNA–Protein interactions for RNA: ENST00000421450.1

TNFAIP3-203, Transcript of TNF alpha induced protein 3, humanhuman

TSL 2

Gene TNFAIP3, Length 421 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-203ENST00000421450 NFE2L2Q16236 605 aa23.26■■□□□ 1.31
TNFAIP3-203ENST00000421450 PLEKHF1Q96S99 279 aa23.26■■□□□ 1.31
TNFAIP3-203ENST00000421450 SOS1Q07889 1333 aaPredicted RBP23.26■■□□□ 1.31
TNFAIP3-203ENST00000421450 USP42Q9H9J4 1324 aaKnown RBP23.26■■□□□ 1.31
TNFAIP3-203ENST00000421450 ZNF330Q9Y3S2 320 aaPredicted RBP23.25■■□□□ 1.31
TNFAIP3-203ENST00000421450 NPM2Q86SE8 214 aaKnown RBP23.24■■□□□ 1.31
TNFAIP3-203ENST00000421450 COL15A1P39059 1388 aa23.24■■□□□ 1.31
TNFAIP3-203ENST00000421450 DLG5Q8TDM6 1919 aa23.23■■□□□ 1.31
TNFAIP3-203ENST00000421450 FKBP8Q14318 412 aa23.23■■□□□ 1.31
TNFAIP3-203ENST00000421450 WDR43Q15061 677 aaKnown RBP eCLIP23.23■■□□□ 1.31
TNFAIP3-203ENST00000421450 TAF7Q15545 349 aaPredicted RBP23.23■■□□□ 1.31
TNFAIP3-203ENST00000421450 USPL1Q5W0Q7 1092 aa23.23■■□□□ 1.31
TNFAIP3-203ENST00000421450 PRKRIP1Q9H875 184 aaPredicted RBP23.22■■□□□ 1.31
TNFAIP3-203ENST00000421450 WWC3Q9ULE0 1092 aa23.22■■□□□ 1.31
TNFAIP3-203ENST00000421450 A0A087WZG4 1122 aa23.21■■□□□ 1.31
TNFAIP3-203ENST00000421450 GRIN3BO60391 1043 aa23.21■■□□□ 1.31
TNFAIP3-203ENST00000421450 MIS18AQ9NYP9 233 aa23.21■■□□□ 1.31
TNFAIP3-203ENST00000421450 NARFQ9UHQ1 456 aa23.21■■□□□ 1.31
TNFAIP3-203ENST00000421450 YBX3P16989 372 aaKnown RBP eCLIP23.2■■□□□ 1.3
TNFAIP3-203ENST00000421450 CHD4Q14839 1912 aa23.2■■□□□ 1.3
TNFAIP3-203ENST00000421450 SNRPA1P09661 255 aaKnown RBP23.19■■□□□ 1.3
TNFAIP3-203ENST00000421450 PNISRQ8TF01 805 aaKnown RBP23.19■■□□□ 1.3
TNFAIP3-203ENST00000421450 A1BGP04217 495 aa23.18■■□□□ 1.3
TNFAIP3-203ENST00000421450 RIPK4P57078 832 aa23.18■■□□□ 1.3
TNFAIP3-203ENST00000421450 CCDC146Q8IYE0 955 aa23.18■■□□□ 1.3
TNFAIP3-203ENST00000421450 THUMPD2Q9BTF0 503 aaKnown RBP23.18■■□□□ 1.3
TNFAIP3-203ENST00000421450 USP16Q9Y5T5 823 aa23.18■■□□□ 1.3
TNFAIP3-203ENST00000421450 EIF5P55010 431 aaKnown RBP23.17■■□□□ 1.3
TNFAIP3-203ENST00000421450 ZNF316A6NFI3 1004 aaPredicted RBP23.16■■□□□ 1.3
TNFAIP3-203ENST00000421450 IL6STP40189 918 aaPredicted RBP23.16■■□□□ 1.3
TNFAIP3-203ENST00000421450 DDR1Q08345 913 aa23.16■■□□□ 1.3
TNFAIP3-203ENST00000421450 PRAMEF22A3QJZ6 481 aa23.15■■□□□ 1.3
TNFAIP3-203ENST00000421450 TGFB2P61812 414 aa23.15■■□□□ 1.3
TNFAIP3-203ENST00000421450 NEUROD2Q15784 382 aa23.15■■□□□ 1.3
TNFAIP3-203ENST00000421450 TBC1D2BQ9UPU7 963 aa23.15■■□□□ 1.3
TNFAIP3-203ENST00000421450 A0A0G2JLW4 131 aa23.14■■□□□ 1.29
TNFAIP3-203ENST00000421450 TM4SF1P30408 202 aa23.14■■□□□ 1.29
TNFAIP3-203ENST00000421450 LMOD3Q0VAK6 560 aa23.14■■□□□ 1.29
TNFAIP3-203ENST00000421450 BICDL1Q6ZP65 573 aa23.14■■□□□ 1.29
TNFAIP3-203ENST00000421450 RRP7AQ9Y3A4 280 aaKnown RBP23.14■■□□□ 1.29
TNFAIP3-203ENST00000421450 C10orf71Q711Q0 1435 aa23.14■■□□□ 1.29
TNFAIP3-203ENST00000421450 POLRMTO00411 1230 aaKnown RBP23.13■■□□□ 1.29
TNFAIP3-203ENST00000421450 TMPOP42166 694 aaKnown RBP23.13■■□□□ 1.29
TNFAIP3-203ENST00000421450 PIP4K2AP48426 406 aaPredicted RBP23.13■■□□□ 1.29
TNFAIP3-203ENST00000421450 NFIXQ14938 502 aa23.13■■□□□ 1.29
TNFAIP3-203ENST00000421450 RUNDC1Q96C34 613 aa23.12■■□□□ 1.29
TNFAIP3-203ENST00000421450 BCL2L12Q9HB09 334 aa23.12■■□□□ 1.29
TNFAIP3-203ENST00000421450 ADAMTS8Q9UP79 889 aa23.12■■□□□ 1.29
TNFAIP3-203ENST00000421450 KIF13BQ9NQT8 1826 aa23.12■■□□□ 1.29
TNFAIP3-203ENST00000421450 N4BP2Q86UW6 1770 aaPredicted RBP23.12■■□□□ 1.29
TNFAIP3-203ENST00000421450 DPEP1P16444 411 aa23.11■■□□□ 1.29
TNFAIP3-203ENST00000421450 PXDNLA1KZ92 1463 aa23.11■■□□□ 1.29
TNFAIP3-203ENST00000421450 DZIP3Q86Y13 1208 aaKnown RBP23.1■■□□□ 1.29
TNFAIP3-203ENST00000421450 BCS1LQ9Y276 419 aa23.1■■□□□ 1.29
TNFAIP3-203ENST00000421450 SERPINB2P05120 415 aa23.09■■□□□ 1.29
TNFAIP3-203ENST00000421450 TSPYL4Q9UJ04 414 aa23.09■■□□□ 1.29
TNFAIP3-203ENST00000421450 KDM3BQ7LBC6 1761 aa23.07■■□□□ 1.28
TNFAIP3-203ENST00000421450 EIF4A1P60842 406 aaKnown RBP23.07■■□□□ 1.28
TNFAIP3-203ENST00000421450 TBC1D9BQ66K14 1250 aa23.07■■□□□ 1.28
TNFAIP3-203ENST00000421450 NPHP1O15259 732 aa23.06■■□□□ 1.28
TNFAIP3-203ENST00000421450 ZNF784Q8NCA9 323 aaPredicted RBP23.06■■□□□ 1.28
TNFAIP3-203ENST00000421450 GIGYF1O75420 1035 aaPredicted RBP23.05■■□□□ 1.28
TNFAIP3-203ENST00000421450 PIM2Q9P1W9 311 aa23.05■■□□□ 1.28
TNFAIP3-203ENST00000421450 AFDNP55196 1824 aaKnown RBP23.05■■□□□ 1.28
TNFAIP3-203ENST00000421450 KIAA1551Q9HCM1 1747 aa23.05■■□□□ 1.28
TNFAIP3-203ENST00000421450 NBPF26B4DH59 902 aa23.04■■□□□ 1.28
TNFAIP3-203ENST00000421450 CAMTA2O94983 1202 aa23.04■■□□□ 1.28
TNFAIP3-203ENST00000421450 CHRNA5P30532 468 aa23.04■■□□□ 1.28
TNFAIP3-203ENST00000421450 NBPF10Q6P3W6 841 aaKnown RBP23.04■■□□□ 1.28
TNFAIP3-203ENST00000421450 NGEFQ8N5V2 710 aa23.04■■□□□ 1.28
TNFAIP3-203ENST00000421450 NBPF15Q8N660 670 aa23.04■■□□□ 1.28
TNFAIP3-203ENST00000421450 LAS1LQ9Y4W2 734 aaKnown RBP23.04■■□□□ 1.28
TNFAIP3-203ENST00000421450 SCN7AQ01118 1682 aa23.03■■□□□ 1.28
TNFAIP3-203ENST00000421450 UTRNP46939 3433 aa23.03■■□□□ 1.28
TNFAIP3-203ENST00000421450 SETDB2Q96T68 719 aa23.03■■□□□ 1.28
TNFAIP3-203ENST00000421450 ZNF652Q9Y2D9 606 aa23.03■■□□□ 1.28
TNFAIP3-203ENST00000421450 LAMB4A4D0S4 1761 aa23.03■■□□□ 1.28
TNFAIP3-203ENST00000421450 ANP32CO43423 234 aa23.02■■□□□ 1.28
TNFAIP3-203ENST00000421450 DALRD3Q5D0E6 543 aaKnown RBP23.02■■□□□ 1.28
TNFAIP3-203ENST00000421450 ARHGAP27Q6ZUM4 889 aa23.01■■□□□ 1.27
TNFAIP3-203ENST00000421450 BABAM1Q9NWV8 329 aa23.01■■□□□ 1.27
TNFAIP3-203ENST00000421450 CARMIL3Q8ND23 1372 aa23.01■■□□□ 1.27
TNFAIP3-203ENST00000421450 MYL6BP14649 208 aa23■■□□□ 1.27
TNFAIP3-203ENST00000421450 KCNA3P22001 575 aa23■■□□□ 1.27
TNFAIP3-203ENST00000421450 EIF2S2P20042 333 aaKnown RBP22.99■■□□□ 1.27
TNFAIP3-203ENST00000421450 CLEC4GQ6UXB4 293 aa22.99■■□□□ 1.27
TNFAIP3-203ENST00000421450 TRIM35Q9UPQ4 493 aa22.99■■□□□ 1.27
TNFAIP3-203ENST00000421450 GOLGB1Q14789 3259 aaKnown RBP22.99■■□□□ 1.27
TNFAIP3-203ENST00000421450 NRXN2Q9P2S2 1712 aa22.99■■□□□ 1.27
TNFAIP3-203ENST00000421450 APAF1O14727 1248 aa22.98■■□□□ 1.27
TNFAIP3-203ENST00000421450 C2CD5Q86YS7 1000 aa22.98■■□□□ 1.27
TNFAIP3-203ENST00000421450 CCDC24Q8N4L8 307 aa22.98■■□□□ 1.27
TNFAIP3-203ENST00000421450 BCORQ6W2J9 1755 aa22.98■■□□□ 1.27
TNFAIP3-203ENST00000421450 H0YIN7 160 aa22.97■■□□□ 1.27
TNFAIP3-203ENST00000421450 CNBD1Q8NA66 436 aa22.97■■□□□ 1.27
TNFAIP3-203ENST00000421450 BRCA1P38398 1863 aaKnown RBP22.96■■□□□ 1.27
TNFAIP3-203ENST00000421450 ST5P78524 1137 aa22.96■■□□□ 1.27
TNFAIP3-203ENST00000421450 CCDC184Q52MB2 194 aa22.96■■□□□ 1.27
TNFAIP3-203ENST00000421450 PRR5LQ6MZQ0 368 aa22.96■■□□□ 1.27
TNFAIP3-203ENST00000421450 KIF6Q6ZMV9 814 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms