RNA–Protein interactions for RNA: ENST00000421234.5

LINC00475-204, long intergenic non-protein coding RNA 475, humanhuman

TSL 3

Gene LINC00475, Length 467 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-204ENST00000421234 NFATC2IPQ8NCF5 419 aa17.29■□□□□ 0.36
LINC00475-204ENST00000421234 LINC00116Q8NCU8 138 aa17.29■□□□□ 0.36
LINC00475-204ENST00000421234 MRC1P22897 1456 aa17.29■□□□□ 0.36
LINC00475-204ENST00000421234 FHDC1Q9C0D6 1143 aaPredicted RBP17.28■□□□□ 0.36
LINC00475-204ENST00000421234 GNPATO15228 680 aa17.27■□□□□ 0.36
LINC00475-204ENST00000421234 RNMTO43148 476 aaKnown RBP17.27■□□□□ 0.36
LINC00475-204ENST00000421234 ITPK1Q13572 414 aa17.27■□□□□ 0.36
LINC00475-204ENST00000421234 KLHL34Q8N239 644 aa17.27■□□□□ 0.36
LINC00475-204ENST00000421234 GAS2L2Q8NHY3 880 aa17.27■□□□□ 0.36
LINC00475-204ENST00000421234 TJP1Q07157 1748 aa17.27■□□□□ 0.35
LINC00475-204ENST00000421234 PTCD1O75127 700 aaKnown RBP17.26■□□□□ 0.35
LINC00475-204ENST00000421234 U2AF1L5P0DN76 240 aaPredicted RBP17.26■□□□□ 0.35
LINC00475-204ENST00000421234 TIE1P35590 1138 aa17.26■□□□□ 0.35
LINC00475-204ENST00000421234 U2AF1Q01081 240 aaKnown RBP eCLIP17.26■□□□□ 0.35
LINC00475-204ENST00000421234 SLC52A2Q9HAB3 445 aa17.26■□□□□ 0.35
LINC00475-204ENST00000421234 LGR6Q9HBX8 967 aa17.26■□□□□ 0.35
LINC00475-204ENST00000421234 MAP3K5Q99683 1374 aa17.26■□□□□ 0.35
LINC00475-204ENST00000421234 CICQ96RK0 1608 aaPredicted RBP17.25■□□□□ 0.35
LINC00475-204ENST00000421234 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.25■□□□□ 0.35
LINC00475-204ENST00000421234 SSFA2P28290 1259 aa17.25■□□□□ 0.35
LINC00475-204ENST00000421234 PRKAR2BP31323 418 aa17.25■□□□□ 0.35
LINC00475-204ENST00000421234 MSL1Q68DK7 614 aa17.25■□□□□ 0.35
LINC00475-204ENST00000421234 DDX10Q13206 875 aaKnown RBP17.24■□□□□ 0.35
LINC00475-204ENST00000421234 SYT17Q9BSW7 474 aa17.24■□□□□ 0.35
LINC00475-204ENST00000421234 SIPA1L3O60292 1781 aaPredicted RBP17.24■□□□□ 0.35
LINC00475-204ENST00000421234 MYH14Q7Z406 1995 aaKnown RBP17.24■□□□□ 0.35
LINC00475-204ENST00000421234 UBR2Q8IWV8 1755 aa17.23■□□□□ 0.35
LINC00475-204ENST00000421234 GNAT3A8MTJ3 354 aa17.23■□□□□ 0.35
LINC00475-204ENST00000421234 MAP3K13O43283 966 aa17.23■□□□□ 0.35
LINC00475-204ENST00000421234 SLC4A9Q96Q91 983 aa17.23■□□□□ 0.35
LINC00475-204ENST00000421234 RSPH6AQ9H0K4 717 aa17.23■□□□□ 0.35
LINC00475-204ENST00000421234 C4AP0C0L4 1744 aa17.22■□□□□ 0.35
LINC00475-204ENST00000421234 SMIM5Q71RC9 77 aa17.22■□□□□ 0.35
LINC00475-204ENST00000421234 AMIGO3Q86WK7 504 aa17.22■□□□□ 0.35
LINC00475-204ENST00000421234 RTCBQ9Y3I0 505 aaKnown RBP17.22■□□□□ 0.35
LINC00475-204ENST00000421234 CNTNAP4Q9C0A0 1308 aa17.21■□□□□ 0.35
LINC00475-204ENST00000421234 ZEB1P37275 1124 aaPredicted RBP17.21■□□□□ 0.35
LINC00475-204ENST00000421234 TEFQ10587 303 aa17.21■□□□□ 0.35
LINC00475-204ENST00000421234 DLG5Q8TDM6 1919 aa17.21■□□□□ 0.35
LINC00475-204ENST00000421234 FCHSD2O94868 740 aa17.2■□□□□ 0.34
LINC00475-204ENST00000421234 NEFMP07197 916 aa17.2■□□□□ 0.34
LINC00475-204ENST00000421234 RC3H1Q5TC82 1133 aaKnown RBP17.2■□□□□ 0.34
LINC00475-204ENST00000421234 SEC24BO95487 1268 aa17.19■□□□□ 0.34
LINC00475-204ENST00000421234 SLC39A6Q13433 755 aa17.19■□□□□ 0.34
LINC00475-204ENST00000421234 RALBP1Q15311 655 aa17.19■□□□□ 0.34
LINC00475-204ENST00000421234 TTC5Q8N0Z6 440 aa17.19■□□□□ 0.34
LINC00475-204ENST00000421234 PHACTR3Q96KR7 559 aa17.19■□□□□ 0.34
LINC00475-204ENST00000421234 KCPQ6ZWJ8 1503 aa17.19■□□□□ 0.34
LINC00475-204ENST00000421234 CRKLP46109 303 aaKnown RBP17.18■□□□□ 0.34
LINC00475-204ENST00000421234 TRAPPC3LQ5T215 181 aa17.18■□□□□ 0.34
LINC00475-204ENST00000421234 COLQQ9Y215 455 aaPredicted RBP17.18■□□□□ 0.34
LINC00475-204ENST00000421234 RTF1Q92541 710 aaKnown RBP17.17■□□□□ 0.34
LINC00475-204ENST00000421234 CHD4Q14839 1912 aa17.17■□□□□ 0.34
LINC00475-204ENST00000421234 RPS6KA4O75676 772 aa17.16■□□□□ 0.34
LINC00475-204ENST00000421234 RFC4P35249 363 aa17.16■□□□□ 0.34
LINC00475-204ENST00000421234 CDAN1Q8IWY9 1227 aa17.16■□□□□ 0.34
LINC00475-204ENST00000421234 IL17REQ8NFR9 667 aa17.16■□□□□ 0.34
LINC00475-204ENST00000421234 TTLL13PA6NNM8 815 aa17.15■□□□□ 0.34
LINC00475-204ENST00000421234 DNAJC10Q8IXB1 793 aa17.15■□□□□ 0.34
LINC00475-204ENST00000421234 CEMIPQ8WUJ3 1361 aa17.15■□□□□ 0.34
LINC00475-204ENST00000421234 ARHGEF1Q92888 912 aaKnown RBP17.14■□□□□ 0.33
LINC00475-204ENST00000421234 PNNQ9H307 717 aaKnown RBP17.14■□□□□ 0.33
LINC00475-204ENST00000421234 MYBBP1AQ9BQG0 1328 aaKnown RBP17.14■□□□□ 0.33
LINC00475-204ENST00000421234 GPR162Q16538 588 aa17.13■□□□□ 0.33
LINC00475-204ENST00000421234 VSIG10Q8N0Z9 540 aa17.13■□□□□ 0.33
LINC00475-204ENST00000421234 NLGN2Q8NFZ4 835 aa17.13■□□□□ 0.33
LINC00475-204ENST00000421234 CCDC87Q9NVE4 849 aa17.13■□□□□ 0.33
LINC00475-204ENST00000421234 MAPK8IP3Q9UPT6 1336 aa17.13■□□□□ 0.33
LINC00475-204ENST00000421234 ZNF790Q6PG37 636 aa17.12■□□□□ 0.33
LINC00475-204ENST00000421234 MCM10Q7L590 875 aa17.12■□□□□ 0.33
LINC00475-204ENST00000421234 RASEFQ8IZ41 740 aa17.12■□□□□ 0.33
LINC00475-204ENST00000421234 BTBD11A6QL63 1104 aa17.11■□□□□ 0.33
LINC00475-204ENST00000421234 CYP19A1P11511 503 aaPredicted RBP17.11■□□□□ 0.33
LINC00475-204ENST00000421234 YY1P25490 414 aa17.11■□□□□ 0.33
LINC00475-204ENST00000421234 INTS5Q6P9B9 1019 aaKnown RBP17.11■□□□□ 0.33
LINC00475-204ENST00000421234 NLGN1Q8N2Q7 840 aa17.11■□□□□ 0.33
LINC00475-204ENST00000421234 CD2APQ9Y5K6 639 aa17.11■□□□□ 0.33
LINC00475-204ENST00000421234 KIF13BQ9NQT8 1826 aa17.1■□□□□ 0.33
LINC00475-204ENST00000421234 HTATSF1O43719 755 aaKnown RBP17.1■□□□□ 0.33
LINC00475-204ENST00000421234 MMP10P09238 476 aa17.1■□□□□ 0.33
LINC00475-204ENST00000421234 ZNF496Q96IT1 587 aaPredicted RBP17.1■□□□□ 0.33
LINC00475-204ENST00000421234 FMNL2Q96PY5 1086 aa17.1■□□□□ 0.33
LINC00475-204ENST00000421234 HEG1Q9ULI3 1381 aa17.1■□□□□ 0.33
LINC00475-204ENST00000421234 STARD3NLO95772 234 aa17.09■□□□□ 0.33
LINC00475-204ENST00000421234 GYS1P13807 737 aa17.09■□□□□ 0.33
LINC00475-204ENST00000421234 COL15A1P39059 1388 aa17.08■□□□□ 0.32
LINC00475-204ENST00000421234 SOS1Q07889 1333 aaPredicted RBP17.08■□□□□ 0.32
LINC00475-204ENST00000421234 USP42Q9H9J4 1324 aaKnown RBP17.08■□□□□ 0.32
LINC00475-204ENST00000421234 ZPR1O75312 459 aa17.08■□□□□ 0.32
LINC00475-204ENST00000421234 DCTN1Q14203 1278 aa17.08■□□□□ 0.32
LINC00475-204ENST00000421234 PLEKHF1Q96S99 279 aa17.08■□□□□ 0.32
LINC00475-204ENST00000421234 TEX13AQ9BXU3 409 aaPredicted RBP17.08■□□□□ 0.32
LINC00475-204ENST00000421234 SRP68Q9UHB9 627 aaKnown RBP17.08■□□□□ 0.32
LINC00475-204ENST00000421234 ZBTB1Q9Y2K1 713 aa17.08■□□□□ 0.32
LINC00475-204ENST00000421234 PARP3Q9Y6F1 533 aa17.07■□□□□ 0.32
LINC00475-204ENST00000421234 N4BP2Q86UW6 1770 aaPredicted RBP17.07■□□□□ 0.32
LINC00475-204ENST00000421234 CANXP27824 592 aaKnown RBP17.06■□□□□ 0.32
LINC00475-204ENST00000421234 NFE2L2Q16236 605 aa17.06■□□□□ 0.32
LINC00475-204ENST00000421234 MIER1Q8N108 512 aa17.06■□□□□ 0.32
LINC00475-204ENST00000421234 KDM3BQ7LBC6 1761 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms