RNA–Protein interactions for RNA: ENST00000420869.2

TRIM49D1-201, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 1,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-201ENST00000420869 CHMLP26374 656 aa10.69□□□□□ -0.7
TRIM49D1-201ENST00000420869 PHAXQ9H814 394 aaKnown RBP10.69□□□□□ -0.7
TRIM49D1-201ENST00000420869 RRAGDQ9NQL2 400 aaPredicted RBP10.69□□□□□ -0.7
TRIM49D1-201ENST00000420869 GOLGA6L22H0YM25 854 aa10.68□□□□□ -0.7
TRIM49D1-201ENST00000420869 RAB11FIP3O75154 756 aa10.68□□□□□ -0.7
TRIM49D1-201ENST00000420869 UBTFL1P0CB47 393 aaPredicted RBP10.68□□□□□ -0.7
TRIM49D1-201ENST00000420869 AKAP4Q5JQC9 854 aa10.68□□□□□ -0.7
TRIM49D1-201ENST00000420869 GAS2L3Q86XJ1 694 aa10.68□□□□□ -0.7
TRIM49D1-201ENST00000420869 ANKLE2Q86XL3 938 aa10.68□□□□□ -0.7
TRIM49D1-201ENST00000420869 LTV1Q96GA3 475 aaPredicted RBP10.68□□□□□ -0.7
TRIM49D1-201ENST00000420869 CHMP4AQ9BY43 222 aa10.68□□□□□ -0.7
TRIM49D1-201ENST00000420869 USP42Q9H9J4 1324 aaKnown RBP10.68□□□□□ -0.7
TRIM49D1-201ENST00000420869 MYH3P11055 1940 aa10.67□□□□□ -0.7
TRIM49D1-201ENST00000420869 DDX60Q8IY21 1712 aaKnown RBP10.67□□□□□ -0.7
TRIM49D1-201ENST00000420869 MCM2P49736 904 aa10.67□□□□□ -0.7
TRIM49D1-201ENST00000420869 CUL4AQ13619 759 aa10.67□□□□□ -0.7
TRIM49D1-201ENST00000420869 NECTIN2Q92692 538 aa10.67□□□□□ -0.7
TRIM49D1-201ENST00000420869 ZDHHC9Q9Y397 364 aa10.67□□□□□ -0.7
TRIM49D1-201ENST00000420869 PLEKHG2Q9H7P9 1386 aa10.67□□□□□ -0.7
TRIM49D1-201ENST00000420869 MTX1Q13505 466 aa10.66□□□□□ -0.7
TRIM49D1-201ENST00000420869 BEND3Q5T5X7 828 aa10.66□□□□□ -0.7
TRIM49D1-201ENST00000420869 TSHZ3Q63HK5 1081 aa10.66□□□□□ -0.7
TRIM49D1-201ENST00000420869 LGR6Q9HBX8 967 aa10.66□□□□□ -0.7
TRIM49D1-201ENST00000420869 LMBRD1Q9NUN5 540 aa10.66□□□□□ -0.7
TRIM49D1-201ENST00000420869 ZNF445P59923 1031 aa10.66□□□□□ -0.7
TRIM49D1-201ENST00000420869 PKP1Q13835 747 aa10.66□□□□□ -0.7
TRIM49D1-201ENST00000420869 ARHGEF25Q86VW2 580 aa10.66□□□□□ -0.7
TRIM49D1-201ENST00000420869 UNC5CLQ8IV45 518 aa10.66□□□□□ -0.7
TRIM49D1-201ENST00000420869 ZGPATQ8N5A5 531 aaKnown RBP10.66□□□□□ -0.7
TRIM49D1-201ENST00000420869 PI4K2BQ8TCG2 481 aa10.66□□□□□ -0.7
TRIM49D1-201ENST00000420869 DNAAF4Q8WXU2 420 aa10.66□□□□□ -0.7
TRIM49D1-201ENST00000420869 PALD1Q9ULE6 856 aa10.66□□□□□ -0.7
TRIM49D1-201ENST00000420869 MCCP23508 829 aa10.65□□□□□ -0.7
TRIM49D1-201ENST00000420869 PPP1R42Q7Z4L9 355 aa10.65□□□□□ -0.7
TRIM49D1-201ENST00000420869 CHPF2Q9P2E5 772 aa10.65□□□□□ -0.7
TRIM49D1-201ENST00000420869 SPEF2Q9C093 1822 aa10.65□□□□□ -0.71
TRIM49D1-201ENST00000420869 C1orf167Q5SNV9 1468 aa10.65□□□□□ -0.71
TRIM49D1-201ENST00000420869 ANKRD36CQ5JPF3 1778 aa10.65□□□□□ -0.71
TRIM49D1-201ENST00000420869 RNMTO43148 476 aaKnown RBP10.64□□□□□ -0.71
TRIM49D1-201ENST00000420869 AMOTQ4VCS5 1084 aa10.64□□□□□ -0.71
TRIM49D1-201ENST00000420869 PLEKHO1Q53GL0 409 aaPredicted RBP10.64□□□□□ -0.71
TRIM49D1-201ENST00000420869 ZNF530Q6P9A1 599 aaPredicted RBP10.64□□□□□ -0.71
TRIM49D1-201ENST00000420869 RHPN1Q8TCX5 695 aa10.64□□□□□ -0.71
TRIM49D1-201ENST00000420869 INTS4Q96HW7 963 aaKnown RBP10.64□□□□□ -0.71
TRIM49D1-201ENST00000420869 TMX3Q96JJ7 454 aa10.64□□□□□ -0.71
TRIM49D1-201ENST00000420869 RAD50Q92878 1312 aa10.64□□□□□ -0.71
TRIM49D1-201ENST00000420869 KCNQ3O43525 872 aa10.63□□□□□ -0.71
TRIM49D1-201ENST00000420869 HSPA4P34932 840 aa10.63□□□□□ -0.71
TRIM49D1-201ENST00000420869 C14orf37Q86TY3 774 aa10.63□□□□□ -0.71
TRIM49D1-201ENST00000420869 KIF1BPQ96EK5 621 aa10.63□□□□□ -0.71
TRIM49D1-201ENST00000420869 IL25Q9H293 177 aa10.63□□□□□ -0.71
TRIM49D1-201ENST00000420869 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.63□□□□□ -0.71
TRIM49D1-201ENST00000420869 CHD4Q14839 1912 aa10.63□□□□□ -0.71
TRIM49D1-201ENST00000420869 KDM6AO15550 1401 aaPredicted RBP10.63□□□□□ -0.71
TRIM49D1-201ENST00000420869 ITGB4P16144 1822 aa10.63□□□□□ -0.71
TRIM49D1-201ENST00000420869 TTC41PQ6P2S7 1318 aa10.63□□□□□ -0.71
TRIM49D1-201ENST00000420869 ALDH1L1O75891 902 aa10.63□□□□□ -0.71
TRIM49D1-201ENST00000420869 PLEKHG5O94827 1062 aa10.63□□□□□ -0.71
TRIM49D1-201ENST00000420869 NBPF7P0C2Y1 421 aaPredicted RBP10.63□□□□□ -0.71
TRIM49D1-201ENST00000420869 CLCN1P35523 988 aa10.63□□□□□ -0.71
TRIM49D1-201ENST00000420869 NEK4P51957 841 aa10.63□□□□□ -0.71
TRIM49D1-201ENST00000420869 PSME1Q06323 249 aa10.63□□□□□ -0.71
TRIM49D1-201ENST00000420869 TEFQ10587 303 aa10.63□□□□□ -0.71
TRIM49D1-201ENST00000420869 MCTP1Q6DN14 999 aa10.63□□□□□ -0.71
TRIM49D1-201ENST00000420869 LRRC59Q96AG4 307 aaKnown RBP10.63□□□□□ -0.71
TRIM49D1-201ENST00000420869 ARXQ96QS3 562 aa10.63□□□□□ -0.71
TRIM49D1-201ENST00000420869 DDX49Q9Y6V7 483 aaKnown RBP10.63□□□□□ -0.71
TRIM49D1-201ENST00000420869 TOGARAM1Q9Y4F4 1720 aa10.62□□□□□ -0.71
TRIM49D1-201ENST00000420869 UTYO14607 1347 aa10.62□□□□□ -0.71
TRIM49D1-201ENST00000420869 WNK3Q9BYP7 1800 aa10.62□□□□□ -0.71
TRIM49D1-201ENST00000420869 PI4KAP2A4QPH2 592 aa10.62□□□□□ -0.71
TRIM49D1-201ENST00000420869 BTBD11A6QL63 1104 aa10.62□□□□□ -0.71
TRIM49D1-201ENST00000420869 TRIM6-TRIM34B2RNG4 842 aa10.62□□□□□ -0.71
TRIM49D1-201ENST00000420869 SGSM2O43147 1006 aa10.62□□□□□ -0.71
TRIM49D1-201ENST00000420869 BRD1O95696 1058 aa10.62□□□□□ -0.71
TRIM49D1-201ENST00000420869 HSP90AB4PQ58FF6 505 aa10.62□□□□□ -0.71
TRIM49D1-201ENST00000420869 ESCO1Q5FWF5 840 aa10.62□□□□□ -0.71
TRIM49D1-201ENST00000420869 PI4KAP1Q8N8J0 262 aa10.62□□□□□ -0.71
TRIM49D1-201ENST00000420869 RILPL2Q969X0 211 aa10.62□□□□□ -0.71
TRIM49D1-201ENST00000420869 PPP1R9BQ96SB3 815 aa10.62□□□□□ -0.71
TRIM49D1-201ENST00000420869 IL1RAPL2Q9NP60 686 aa10.62□□□□□ -0.71
TRIM49D1-201ENST00000420869 ANO2Q9NQ90 1003 aa10.62□□□□□ -0.71
TRIM49D1-201ENST00000420869 DBF4Q9UBU7 674 aaPredicted RBP10.62□□□□□ -0.71
TRIM49D1-201ENST00000420869 DCCP43146 1447 aa10.62□□□□□ -0.71
TRIM49D1-201ENST00000420869 SRGAP3O43295 1099 aa10.61□□□□□ -0.71
TRIM49D1-201ENST00000420869 GIGYF1O75420 1035 aaPredicted RBP10.61□□□□□ -0.71
TRIM49D1-201ENST00000420869 SURF6O75683 361 aaKnown RBP10.61□□□□□ -0.71
TRIM49D1-201ENST00000420869 GCP02774 474 aa10.61□□□□□ -0.71
TRIM49D1-201ENST00000420869 NUTM1Q86Y26 1132 aa10.61□□□□□ -0.71
TRIM49D1-201ENST00000420869 MEGF6O75095 1541 aa10.61□□□□□ -0.71
TRIM49D1-201ENST00000420869 EIF2S2P20042 333 aaKnown RBP10.6□□□□□ -0.71
TRIM49D1-201ENST00000420869 POTEDQ86YR6 584 aa10.6□□□□□ -0.71
TRIM49D1-201ENST00000420869 GPT2Q8TD30 523 aa10.6□□□□□ -0.71
TRIM49D1-201ENST00000420869 ANKRD24Q8TF21 1146 aa10.6□□□□□ -0.71
TRIM49D1-201ENST00000420869 LSG1Q9H089 658 aaKnown RBP10.6□□□□□ -0.71
TRIM49D1-201ENST00000420869 MYO5AQ9Y4I1 1855 aaKnown RBP10.6□□□□□ -0.71
TRIM49D1-201ENST00000420869 ECM29Q5VYK3 1845 aa10.6□□□□□ -0.71
TRIM49D1-201ENST00000420869 CCDC173Q0VFZ6 552 aa10.6□□□□□ -0.71
TRIM49D1-201ENST00000420869 ZSCAN23Q3MJ62 389 aa10.6□□□□□ -0.71
TRIM49D1-201ENST00000420869 C1orf141Q5JVX7 400 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms