RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 DNAJC10Q8IXB1 793 aa23.93■■□□□ 1.42
ECHDC3-202ENST00000420401 PNISRQ8TF01 805 aaKnown RBP23.93■■□□□ 1.42
ECHDC3-202ENST00000420401 FMNL2Q96PY5 1086 aa23.93■■□□□ 1.42
ECHDC3-202ENST00000420401 RTCBQ9Y3I0 505 aaKnown RBP23.93■■□□□ 1.42
ECHDC3-202ENST00000420401 KCPQ6ZWJ8 1503 aa23.93■■□□□ 1.42
ECHDC3-202ENST00000420401 ZNF496Q96IT1 587 aaPredicted RBP23.92■■□□□ 1.42
ECHDC3-202ENST00000420401 SIPA1L3O60292 1781 aaPredicted RBP23.91■■□□□ 1.42
ECHDC3-202ENST00000420401 CRKLP46109 303 aaKnown RBP23.91■■□□□ 1.42
ECHDC3-202ENST00000420401 APLP1P51693 650 aa23.91■■□□□ 1.42
ECHDC3-202ENST00000420401 NEUROD2Q15784 382 aa23.91■■□□□ 1.42
ECHDC3-202ENST00000420401 TEX13AQ9BXU3 409 aaPredicted RBP23.91■■□□□ 1.42
ECHDC3-202ENST00000420401 RRP7AQ9Y3A4 280 aaKnown RBP23.91■■□□□ 1.42
ECHDC3-202ENST00000420401 N4BP2Q86UW6 1770 aaPredicted RBP23.91■■□□□ 1.42
ECHDC3-202ENST00000420401 RPS6KA4O75676 772 aa23.9■■□□□ 1.42
ECHDC3-202ENST00000420401 TRAPPC3LQ5T215 181 aa23.9■■□□□ 1.42
ECHDC3-202ENST00000420401 HEG1Q9ULI3 1381 aa23.9■■□□□ 1.42
ECHDC3-202ENST00000420401 KCNQ3O43525 872 aa23.89■■□□□ 1.41
ECHDC3-202ENST00000420401 STARD3NLO95772 234 aa23.89■■□□□ 1.41
ECHDC3-202ENST00000420401 MMP10P09238 476 aa23.89■■□□□ 1.41
ECHDC3-202ENST00000420401 CYP19A1P11511 503 aaPredicted RBP23.89■■□□□ 1.41
ECHDC3-202ENST00000420401 ADRA2BP18089 450 aa23.89■■□□□ 1.41
ECHDC3-202ENST00000420401 THUMPD2Q9BTF0 503 aaKnown RBP23.89■■□□□ 1.41
ECHDC3-202ENST00000420401 KIF13BQ9NQT8 1826 aa23.89■■□□□ 1.41
ECHDC3-202ENST00000420401 CICQ96RK0 1608 aaPredicted RBP23.88■■□□□ 1.41
ECHDC3-202ENST00000420401 DLG5Q8TDM6 1919 aa23.88■■□□□ 1.41
ECHDC3-202ENST00000420401 COL5A3P25940 1745 aaPredicted RBP23.87■■□□□ 1.41
ECHDC3-202ENST00000420401 TOMM70O94826 608 aa23.87■■□□□ 1.41
ECHDC3-202ENST00000420401 INTS5Q6P9B9 1019 aaKnown RBP23.87■■□□□ 1.41
ECHDC3-202ENST00000420401 CCDC87Q9NVE4 849 aa23.87■■□□□ 1.41
ECHDC3-202ENST00000420401 MIS18AQ9NYP9 233 aa23.87■■□□□ 1.41
ECHDC3-202ENST00000420401 BCS1LQ9Y276 419 aa23.87■■□□□ 1.41
ECHDC3-202ENST00000420401 UBR2Q8IWV8 1755 aa23.87■■□□□ 1.41
ECHDC3-202ENST00000420401 TJP1Q07157 1748 aa23.87■■□□□ 1.41
ECHDC3-202ENST00000420401 TGFB2P61812 414 aa23.86■■□□□ 1.41
ECHDC3-202ENST00000420401 APAF1O14727 1248 aa23.85■■□□□ 1.41
ECHDC3-202ENST00000420401 ARHGAP27Q6ZUM4 889 aa23.85■■□□□ 1.41
ECHDC3-202ENST00000420401 PXDNLA1KZ92 1463 aa23.84■■□□□ 1.41
ECHDC3-202ENST00000420401 A0A0G2JLW4 131 aa23.84■■□□□ 1.41
ECHDC3-202ENST00000420401 SNRPA1P09661 255 aaKnown RBP23.84■■□□□ 1.41
ECHDC3-202ENST00000420401 RFC4P35249 363 aa23.84■■□□□ 1.41
ECHDC3-202ENST00000420401 NLGN1Q8N2Q7 840 aa23.84■■□□□ 1.41
ECHDC3-202ENST00000420401 ARHGEF1Q92888 912 aaKnown RBP23.84■■□□□ 1.41
ECHDC3-202ENST00000420401 BABAM1Q9NWV8 329 aa23.84■■□□□ 1.41
ECHDC3-202ENST00000420401 TRIM35Q9UPQ4 493 aa23.84■■□□□ 1.41
ECHDC3-202ENST00000420401 KIAA1551Q9HCM1 1747 aa23.83■■□□□ 1.41
ECHDC3-202ENST00000420401 TSPYL4Q9UJ04 414 aa23.81■■□□□ 1.4
ECHDC3-202ENST00000420401 ZBTB1Q9Y2K1 713 aa23.8■■□□□ 1.4
ECHDC3-202ENST00000420401 SOS1Q07889 1333 aaPredicted RBP23.8■■□□□ 1.4
ECHDC3-202ENST00000420401 CANXP27824 592 aaKnown RBP23.79■■□□□ 1.4
ECHDC3-202ENST00000420401 MYH14Q7Z406 1995 aaKnown RBP23.79■■□□□ 1.4
ECHDC3-202ENST00000420401 EIF4A1P60842 406 aaKnown RBP23.78■■□□□ 1.4
ECHDC3-202ENST00000420401 C16orf71Q8IYS4 520 aaPredicted RBP23.78■■□□□ 1.4
ECHDC3-202ENST00000420401 DNAJC5GQ8N7S2 189 aa23.78■■□□□ 1.4
ECHDC3-202ENST00000420401 NMRK2Q9NPI5 230 aa23.78■■□□□ 1.4
ECHDC3-202ENST00000420401 PARP3Q9Y6F1 533 aa23.78■■□□□ 1.4
ECHDC3-202ENST00000420401 BRCA1P38398 1863 aaKnown RBP23.77■■□□□ 1.4
ECHDC3-202ENST00000420401 C4AP0C0L4 1744 aa23.77■■□□□ 1.4
ECHDC3-202ENST00000420401 DPEP1P16444 411 aa23.77■■□□□ 1.4
ECHDC3-202ENST00000420401 CALD1Q05682 793 aaKnown RBP23.77■■□□□ 1.4
ECHDC3-202ENST00000420401 USP16Q9Y5T5 823 aa23.77■■□□□ 1.4
ECHDC3-202ENST00000420401 C10orf71Q711Q0 1435 aa23.76■■□□□ 1.39
ECHDC3-202ENST00000420401 WDR90Q96KV7 1748 aa23.76■■□□□ 1.39
ECHDC3-202ENST00000420401 ARFGEF1Q9Y6D6 1849 aa23.76■■□□□ 1.39
ECHDC3-202ENST00000420401 A0A087WZG4 1122 aa23.76■■□□□ 1.39
ECHDC3-202ENST00000420401 ZPR1O75312 459 aa23.76■■□□□ 1.39
ECHDC3-202ENST00000420401 NPM2Q86SE8 214 aaKnown RBP23.76■■□□□ 1.39
ECHDC3-202ENST00000420401 FAM9BQ8IZU0 186 aa23.76■■□□□ 1.39
ECHDC3-202ENST00000420401 LAS1LQ9Y4W2 734 aaKnown RBP23.76■■□□□ 1.39
ECHDC3-202ENST00000420401 PRAMEF22A3QJZ6 481 aa23.75■■□□□ 1.39
ECHDC3-202ENST00000420401 CHL1O00533 1208 aa23.75■■□□□ 1.39
ECHDC3-202ENST00000420401 A1BGP04217 495 aa23.75■■□□□ 1.39
ECHDC3-202ENST00000420401 IL6STP40189 918 aaPredicted RBP23.75■■□□□ 1.39
ECHDC3-202ENST00000420401 EIF5P55010 431 aaKnown RBP23.75■■□□□ 1.39
ECHDC3-202ENST00000420401 KDM3BQ7LBC6 1761 aa23.74■■□□□ 1.39
ECHDC3-202ENST00000420401 GYS1P13807 737 aa23.74■■□□□ 1.39
ECHDC3-202ENST00000420401 USP42Q9H9J4 1324 aaKnown RBP23.74■■□□□ 1.39
ECHDC3-202ENST00000420401 COL15A1P39059 1388 aa23.74■■□□□ 1.39
ECHDC3-202ENST00000420401 C9orf131Q5VYM1 1079 aa23.73■■□□□ 1.39
ECHDC3-202ENST00000420401 RBM46Q8TBY0 533 aaKnown RBP23.73■■□□□ 1.39
ECHDC3-202ENST00000420401 CFAP44Q96MT7 982 aa23.73■■□□□ 1.39
ECHDC3-202ENST00000420401 NARFQ9UHQ1 456 aa23.73■■□□□ 1.39
ECHDC3-202ENST00000420401 NCBP3Q53F19 620 aaKnown RBP23.72■■□□□ 1.39
ECHDC3-202ENST00000420401 SRP68Q9UHB9 627 aaKnown RBP23.72■■□□□ 1.39
ECHDC3-202ENST00000420401 ZNF330Q9Y3S2 320 aaPredicted RBP23.72■■□□□ 1.39
ECHDC3-202ENST00000420401 CCER2I3L3R5 266 aa23.71■■□□□ 1.39
ECHDC3-202ENST00000420401 CCDC27Q2M243 656 aa23.71■■□□□ 1.39
ECHDC3-202ENST00000420401 DIEXFQ68CQ4 756 aaKnown RBP23.71■■□□□ 1.39
ECHDC3-202ENST00000420401 PIM2Q9P1W9 311 aa23.71■■□□□ 1.39
ECHDC3-202ENST00000420401 USPL1Q5W0Q7 1092 aa23.7■■□□□ 1.38
ECHDC3-202ENST00000420401 IFT57Q9NWB7 429 aa23.7■■□□□ 1.38
ECHDC3-202ENST00000420401 KDM2BQ8NHM5 1336 aa23.69■■□□□ 1.38
ECHDC3-202ENST00000420401 GNAI1P63096 354 aa23.69■■□□□ 1.38
ECHDC3-202ENST00000420401 FKBP8Q14318 412 aa23.68■■□□□ 1.38
ECHDC3-202ENST00000420401 ZNF853P0CG23 659 aa23.67■■□□□ 1.38
ECHDC3-202ENST00000420401 FSTL1Q12841 308 aa23.67■■□□□ 1.38
ECHDC3-202ENST00000420401 DALRD3Q5D0E6 543 aaKnown RBP23.67■■□□□ 1.38
ECHDC3-202ENST00000420401 WWC1Q8IX03 1113 aa23.67■■□□□ 1.38
ECHDC3-202ENST00000420401 NBPF26B4DH59 902 aa23.66■■□□□ 1.38
ECHDC3-202ENST00000420401 KCNA3P22001 575 aa23.66■■□□□ 1.38
ECHDC3-202ENST00000420401 PIP4K2AP48426 406 aaPredicted RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms