RNA–Protein interactions for RNA: ENST00000420043.1

PHF3-203, Transcript of PHD finger protein 3, humanhuman

TSL 3

Gene PHF3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-203ENST00000420043 STK31Q9BXU1 1019 aa13.11□□□□□ -0.31
PHF3-203ENST00000420043 CHMP4AQ9BY43 222 aa13.11□□□□□ -0.31
PHF3-203ENST00000420043 SPON1Q9HCB6 807 aa13.11□□□□□ -0.31
PHF3-203ENST00000420043 DDX19BQ9UMR2 479 aa13.11□□□□□ -0.31
PHF3-203ENST00000420043 BTBD11A6QL63 1104 aa13.1□□□□□ -0.31
PHF3-203ENST00000420043 HSP90AB1P08238 724 aaKnown RBP13.1□□□□□ -0.31
PHF3-203ENST00000420043 CCDC30Q5VVM6 783 aa13.1□□□□□ -0.31
PHF3-203ENST00000420043 IFNL2Q8IZJ0 200 aa13.1□□□□□ -0.31
PHF3-203ENST00000420043 ZNF219Q9P2Y4 722 aaPredicted RBP13.1□□□□□ -0.31
PHF3-203ENST00000420043 PPP1R1BQ9UD71 204 aaPredicted RBP13.1□□□□□ -0.31
PHF3-203ENST00000420043 MEGF6O75095 1541 aa13.09□□□□□ -0.31
PHF3-203ENST00000420043 WNK3Q9BYP7 1800 aa13.09□□□□□ -0.31
PHF3-203ENST00000420043 BCL9O00512 1426 aa13.09□□□□□ -0.31
PHF3-203ENST00000420043 ZBTB7AO95365 584 aa13.09□□□□□ -0.31
PHF3-203ENST00000420043 PHKG2P15735 406 aa13.09□□□□□ -0.31
PHF3-203ENST00000420043 TMEM57Q8N5G2 664 aa13.09□□□□□ -0.31
PHF3-203ENST00000420043 DDX54Q8TDD1 881 aaKnown RBP13.09□□□□□ -0.31
PHF3-203ENST00000420043 TNS2Q63HR2 1409 aa13.08□□□□□ -0.32
PHF3-203ENST00000420043 PTPRCP08575 1304 aa13.08□□□□□ -0.32
PHF3-203ENST00000420043 SLC4A2P04920 1241 aa13.07□□□□□ -0.32
PHF3-203ENST00000420043 ATF5Q9Y2D1 282 aaPredicted RBP13.07□□□□□ -0.32
PHF3-203ENST00000420043 HOXB7P09629 217 aa13.06□□□□□ -0.32
PHF3-203ENST00000420043 EIF4A1P60842 406 aaKnown RBP13.06□□□□□ -0.32
PHF3-203ENST00000420043 SLC15A2Q16348 729 aa13.06□□□□□ -0.32
PHF3-203ENST00000420043 ZCRB1Q8TBF4 217 aaKnown RBP13.06□□□□□ -0.32
PHF3-203ENST00000420043 DCAF5Q96JK2 942 aa13.06□□□□□ -0.32
PHF3-203ENST00000420043 RWDD1Q9H446 243 aaPredicted RBP13.06□□□□□ -0.32
PHF3-203ENST00000420043 STK32BQ9NY57 414 aa13.06□□□□□ -0.32
PHF3-203ENST00000420043 ABCC4O15439 1325 aa13.06□□□□□ -0.32
PHF3-203ENST00000420043 KDM2BQ8NHM5 1336 aa13.06□□□□□ -0.32
PHF3-203ENST00000420043 PCDH11XQ9BZA7 1347 aa13.06□□□□□ -0.32
PHF3-203ENST00000420043 PCDH11YQ9BZA8 1340 aa13.06□□□□□ -0.32
PHF3-203ENST00000420043 HDGFL1Q5TGJ6 251 aa13.05□□□□□ -0.32
PHF3-203ENST00000420043 NECTIN2Q92692 538 aa13.04□□□□□ -0.32
PHF3-203ENST00000420043 SLC52A2Q9HAB3 445 aa13.04□□□□□ -0.32
PHF3-203ENST00000420043 TSHZ2Q9NRE2 1034 aa13.04□□□□□ -0.32
PHF3-203ENST00000420043 KAT6BQ8WYB5 2073 aa13.03□□□□□ -0.32
PHF3-203ENST00000420043 CYP27B1O15528 508 aa13.03□□□□□ -0.32
PHF3-203ENST00000420043 KCNQ3O43525 872 aa13.03□□□□□ -0.32
PHF3-203ENST00000420043 EIF2S2P20042 333 aaKnown RBP13.03□□□□□ -0.32
PHF3-203ENST00000420043 KCNQ4P56696 695 aa13.03□□□□□ -0.32
PHF3-203ENST00000420043 CABP4P57796 275 aa13.03□□□□□ -0.32
PHF3-203ENST00000420043 SYTL4Q96C24 671 aaPredicted RBP13.03□□□□□ -0.32
PHF3-203ENST00000420043 LRRC4BQ9NT99 713 aa13.03□□□□□ -0.32
PHF3-203ENST00000420043 UTRNP46939 3433 aa13.03□□□□□ -0.32
PHF3-203ENST00000420043 KDM6AO15550 1401 aaPredicted RBP13.03□□□□□ -0.32
PHF3-203ENST00000420043 PKD1L3Q7Z443 1732 aa13.02□□□□□ -0.32
PHF3-203ENST00000420043 RGPD3A6NKT7 1758 aaPredicted RBP13.02□□□□□ -0.32
PHF3-203ENST00000420043 RGPD4Q7Z3J3 1758 aa13.02□□□□□ -0.32
PHF3-203ENST00000420043 PTGER2P43116 358 aa13.02□□□□□ -0.33
PHF3-203ENST00000420043 PRIM1P49642 420 aaKnown RBP13.02□□□□□ -0.33
PHF3-203ENST00000420043 TTC5Q8N0Z6 440 aa13.02□□□□□ -0.33
PHF3-203ENST00000420043 RBM42Q9BTD8 480 aaKnown RBP13.02□□□□□ -0.33
PHF3-203ENST00000420043 ZBTB40Q9NUA8 1239 aa13.02□□□□□ -0.33
PHF3-203ENST00000420043 PCDHB15Q9Y5E8 787 aa13.02□□□□□ -0.33
PHF3-203ENST00000420043 IGHDP01880 384 aa13.01□□□□□ -0.33
PHF3-203ENST00000420043 FLIIQ13045 1269 aa13.01□□□□□ -0.33
PHF3-203ENST00000420043 FKBP5Q13451 457 aaPredicted RBP13.01□□□□□ -0.33
PHF3-203ENST00000420043 ZNF827Q17R98 1081 aa13.01□□□□□ -0.33
PHF3-203ENST00000420043 INTS3Q68E01 1043 aaKnown RBP13.01□□□□□ -0.33
PHF3-203ENST00000420043 NFATC2IPQ8NCF5 419 aa13.01□□□□□ -0.33
PHF3-203ENST00000420043 KDM3BQ7LBC6 1761 aa13.01□□□□□ -0.33
PHF3-203ENST00000420043 NHSQ6T4R5 1651 aa13□□□□□ -0.33
PHF3-203ENST00000420043 ADAMTS7Q9UKP4 1686 aa13□□□□□ -0.33
PHF3-203ENST00000420043 CCT4P50991 539 aaKnown RBP13□□□□□ -0.33
PHF3-203ENST00000420043 ZNF790Q6PG37 636 aa13□□□□□ -0.33
PHF3-203ENST00000420043 SLC4A10Q6U841 1118 aa13□□□□□ -0.33
PHF3-203ENST00000420043 G2E3Q7L622 706 aa13□□□□□ -0.33
PHF3-203ENST00000420043 CASZ1Q86V15 1759 aa12.99□□□□□ -0.33
PHF3-203ENST00000420043 ZBTB7BO15156 539 aaPredicted RBP12.99□□□□□ -0.33
PHF3-203ENST00000420043 YY1P25490 414 aa12.99□□□□□ -0.33
PHF3-203ENST00000420043 SCN11AQ9UI33 1791 aa12.99□□□□□ -0.33
PHF3-203ENST00000420043 ERVV-2B6SEH9 535 aa12.98□□□□□ -0.33
PHF3-203ENST00000420043 GIGYF1O75420 1035 aaPredicted RBP12.98□□□□□ -0.33
PHF3-203ENST00000420043 SLC39A6Q13433 755 aa12.98□□□□□ -0.33
PHF3-203ENST00000420043 HDAC1Q13547 482 aaPredicted RBP12.98□□□□□ -0.33
PHF3-203ENST00000420043 FMNL2Q96PY5 1086 aa12.98□□□□□ -0.33
PHF3-203ENST00000420043 MTFR1LQ9H019 292 aa12.98□□□□□ -0.33
PHF3-203ENST00000420043 CHPF2Q9P2E5 772 aa12.98□□□□□ -0.33
PHF3-203ENST00000420043 DBF4Q9UBU7 674 aaPredicted RBP12.98□□□□□ -0.33
PHF3-203ENST00000420043 MRC1P22897 1456 aa12.97□□□□□ -0.33
PHF3-203ENST00000420043 BTAF1O14981 1849 aa12.97□□□□□ -0.33
PHF3-203ENST00000420043 VIRMAQ69YN4 1812 aaKnown RBP12.97□□□□□ -0.33
PHF3-203ENST00000420043 NKX1-1Q15270 411 aaPredicted RBP12.97□□□□□ -0.33
PHF3-203ENST00000420043 CHRDL2Q6WN34 429 aa12.97□□□□□ -0.33
PHF3-203ENST00000420043 SYT17Q9BSW7 474 aa12.97□□□□□ -0.33
PHF3-203ENST00000420043 FHDC1Q9C0D6 1143 aaPredicted RBP12.97□□□□□ -0.33
PHF3-203ENST00000420043 SIPA1L3O60292 1781 aaPredicted RBP12.97□□□□□ -0.33
PHF3-203ENST00000420043 F6X3S4 739 aa12.96□□□□□ -0.33
PHF3-203ENST00000420043 SNRPA1P09661 255 aaKnown RBP12.96□□□□□ -0.33
PHF3-203ENST00000420043 AKT1S1Q96B36 256 aa12.96□□□□□ -0.33
PHF3-203ENST00000420043 SGIP1Q9BQI5 828 aa12.96□□□□□ -0.33
PHF3-203ENST00000420043 HEG1Q9ULI3 1381 aa12.95□□□□□ -0.34
PHF3-203ENST00000420043 RGS3P49796 1198 aa12.95□□□□□ -0.34
PHF3-203ENST00000420043 C1orf115Q9H7X2 142 aa12.95□□□□□ -0.34
PHF3-203ENST00000420043 HYPKQ9NX55 129 aa12.95□□□□□ -0.34
PHF3-203ENST00000420043 DDX58O95786 925 aaKnown RBP12.94□□□□□ -0.34
PHF3-203ENST00000420043 SLC27A3Q5K4L6 730 aa12.94□□□□□ -0.34
PHF3-203ENST00000420043 ZNF496Q96IT1 587 aaPredicted RBP12.94□□□□□ -0.34
PHF3-203ENST00000420043 ARXQ96QS3 562 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms