RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 MYO5CQ9NQX4 1742 aa20.17■□□□□ 0.82
SYNGAP1-202ENST00000418600 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.17■□□□□ 0.82
SYNGAP1-202ENST00000418600 ZGPATQ8N5A5 531 aaKnown RBP20.17■□□□□ 0.82
SYNGAP1-202ENST00000418600 CDC45O75419 566 aa20.17■□□□□ 0.82
SYNGAP1-202ENST00000418600 TRIM37O94972 964 aa20.17■□□□□ 0.82
SYNGAP1-202ENST00000418600 MINDY4BA8MYZ0 360 aa20.17■□□□□ 0.82
SYNGAP1-202ENST00000418600 BCAR3O75815 825 aa20.16■□□□□ 0.82
SYNGAP1-202ENST00000418600 MAPKBP1O60336 1514 aa20.16■□□□□ 0.82
SYNGAP1-202ENST00000418600 ZCCHC11Q5TAX3 1644 aaKnown RBP20.16■□□□□ 0.82
SYNGAP1-202ENST00000418600 HOXC9P31274 260 aa20.15■□□□□ 0.82
SYNGAP1-202ENST00000418600 PPP4R3AQ6IN85 833 aa20.15■□□□□ 0.82
SYNGAP1-202ENST00000418600 NFATC2IPQ8NCF5 419 aa20.15■□□□□ 0.82
SYNGAP1-202ENST00000418600 LRRFIP2Q9Y608 721 aaKnown RBP20.15■□□□□ 0.82
SYNGAP1-202ENST00000418600 TXLNAP40222 546 aa20.15■□□□□ 0.82
SYNGAP1-202ENST00000418600 PRIM1P49642 420 aaKnown RBP20.15■□□□□ 0.82
SYNGAP1-202ENST00000418600 FOXD4L6Q3SYB3 417 aaPredicted RBP20.14■□□□□ 0.81
SYNGAP1-202ENST00000418600 FOXD4L3Q6VB84 417 aaPredicted RBP20.14■□□□□ 0.81
SYNGAP1-202ENST00000418600 ANKRD13DQ6ZTN6 518 aa20.14■□□□□ 0.81
SYNGAP1-202ENST00000418600 SAMD9Q5K651 1589 aa20.14■□□□□ 0.81
SYNGAP1-202ENST00000418600 LTKP29376 864 aa20.14■□□□□ 0.81
SYNGAP1-202ENST00000418600 GCC1Q96CN9 775 aa20.14■□□□□ 0.81
SYNGAP1-202ENST00000418600 KDM5DQ9BY66 1539 aa20.14■□□□□ 0.81
SYNGAP1-202ENST00000418600 VPS37CA5D8V6 355 aaPredicted RBP20.14■□□□□ 0.81
SYNGAP1-202ENST00000418600 TCIRG1Q13488 830 aa20.14■□□□□ 0.81
SYNGAP1-202ENST00000418600 LARGE2Q8N3Y3 721 aa20.14■□□□□ 0.81
SYNGAP1-202ENST00000418600 NSFL1CQ9UNZ2 370 aaKnown RBP20.13■□□□□ 0.81
SYNGAP1-202ENST00000418600 ECM2O94769 699 aaPredicted RBP20.13■□□□□ 0.81
SYNGAP1-202ENST00000418600 ATP2B1P20020 1258 aa20.13■□□□□ 0.81
SYNGAP1-202ENST00000418600 MVPQ14764 893 aaKnown RBP20.13■□□□□ 0.81
SYNGAP1-202ENST00000418600 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.13■□□□□ 0.813e-27■■■■■ 503.1
SYNGAP1-202ENST00000418600 ABCC11Q96J66 1382 aa20.12■□□□□ 0.81
SYNGAP1-202ENST00000418600 ANKRD2Q9GZV1 360 aa20.12■□□□□ 0.81
SYNGAP1-202ENST00000418600 NIM1KQ8IY84 436 aa20.12■□□□□ 0.81
SYNGAP1-202ENST00000418600 IMMTQ16891 758 aaKnown RBP20.11■□□□□ 0.81
SYNGAP1-202ENST00000418600 TTF1Q15361 905 aaPredicted RBP20.11■□□□□ 0.81
SYNGAP1-202ENST00000418600 ODF2Q5BJF6 829 aa20.11■□□□□ 0.81
SYNGAP1-202ENST00000418600 CT47A1Q5JQC4 288 aaPredicted RBP20.11■□□□□ 0.81
SYNGAP1-202ENST00000418600 TRIM21P19474 475 aaKnown RBP20.1■□□□□ 0.81
SYNGAP1-202ENST00000418600 PIBF1Q8WXW3 757 aa20.1■□□□□ 0.81
SYNGAP1-202ENST00000418600 PDE6BP35913 854 aa20.1■□□□□ 0.81
SYNGAP1-202ENST00000418600 NAPBQ9H115 298 aa20.1■□□□□ 0.81
SYNGAP1-202ENST00000418600 EFCAB6Q5THR3 1501 aa20.1■□□□□ 0.81
SYNGAP1-202ENST00000418600 UBE3BQ7Z3V4 1068 aa20.09■□□□□ 0.81
SYNGAP1-202ENST00000418600 UNC5CLQ8IV45 518 aa20.09■□□□□ 0.81
SYNGAP1-202ENST00000418600 ZNF526Q8TF50 670 aaPredicted RBP20.09■□□□□ 0.81
SYNGAP1-202ENST00000418600 NLRP1Q9C000 1473 aa20.09■□□□□ 0.81
SYNGAP1-202ENST00000418600 PIK3R4Q99570 1358 aa20.09■□□□□ 0.81
SYNGAP1-202ENST00000418600 XAGE3Q8WTP9 111 aa20.09■□□□□ 0.81
SYNGAP1-202ENST00000418600 CA8P35219 290 aa20.09■□□□□ 0.81
SYNGAP1-202ENST00000418600 AFF2P51816 1311 aa20.09■□□□□ 0.81
SYNGAP1-202ENST00000418600 BICD2Q8TD16 824 aa20.09■□□□□ 0.81
SYNGAP1-202ENST00000418600 PLEKHG1Q9ULL1 1385 aa20.09■□□□□ 0.81
SYNGAP1-202ENST00000418600 EIF2AK4Q9P2K8 1649 aaKnown RBP20.09■□□□□ 0.81
SYNGAP1-202ENST00000418600 FBLN1P23142 703 aa20.08■□□□□ 0.81
SYNGAP1-202ENST00000418600 PICALMQ13492 652 aa20.08■□□□□ 0.81
SYNGAP1-202ENST00000418600 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.08■□□□□ 0.87e-8■□□□□ 9
SYNGAP1-202ENST00000418600 RAB11FIP3O75154 756 aa20.07■□□□□ 0.8
SYNGAP1-202ENST00000418600 EIF4A2Q14240 407 aaKnown RBP20.07■□□□□ 0.8
SYNGAP1-202ENST00000418600 IL1RAPL2Q9NP60 686 aa20.07■□□□□ 0.8
SYNGAP1-202ENST00000418600 ZHX3Q9H4I2 956 aa20.07■□□□□ 0.8
SYNGAP1-202ENST00000418600 SEPT12Q8IYM1 358 aa20.07■□□□□ 0.8
SYNGAP1-202ENST00000418600 ALDH1B1P30837 517 aa20.07■□□□□ 0.8
SYNGAP1-202ENST00000418600 RIMBP3CA6NJZ7 1639 aa20.06■□□□□ 0.8
SYNGAP1-202ENST00000418600 RIMBP3BA6NNM3 1639 aa20.06■□□□□ 0.8
SYNGAP1-202ENST00000418600 RIMBP3Q9UFD9 1639 aa20.06■□□□□ 0.8
SYNGAP1-202ENST00000418600 PIK3C2GO75747 1445 aa20.06■□□□□ 0.8
SYNGAP1-202ENST00000418600 UQCRFS1P1P0C7P4 283 aa20.06■□□□□ 0.8
SYNGAP1-202ENST00000418600 CRNKL1Q9BZJ0 848 aaKnown RBP20.06■□□□□ 0.8
SYNGAP1-202ENST00000418600 DNAI2Q9GZS0 605 aa20.06■□□□□ 0.8
SYNGAP1-202ENST00000418600 RANBP6O60518 1105 aaKnown RBP20.06■□□□□ 0.8
SYNGAP1-202ENST00000418600 HECW2Q9P2P5 1572 aa20.06■□□□□ 0.8
SYNGAP1-202ENST00000418600 NOL7Q9UMY1 257 aaKnown RBP20.06■□□□□ 0.8
SYNGAP1-202ENST00000418600 PIP4K2AP48426 406 aaPredicted RBP20.05■□□□□ 0.8
SYNGAP1-202ENST00000418600 DPP8Q6V1X1 898 aaPredicted RBP20.05■□□□□ 0.8
SYNGAP1-202ENST00000418600 CDKL5O76039 1030 aa20.05■□□□□ 0.8
SYNGAP1-202ENST00000418600 COPS6Q7L5N1 327 aa20.05■□□□□ 0.8
SYNGAP1-202ENST00000418600 BECN2A8MW95 431 aa20.05■□□□□ 0.8
SYNGAP1-202ENST00000418600 GOLGA6L19H0YKK7 550 aa20.05■□□□□ 0.8
SYNGAP1-202ENST00000418600 KIF1BPQ96EK5 621 aa20.05■□□□□ 0.8
SYNGAP1-202ENST00000418600 FLIIQ13045 1269 aa20.04■□□□□ 0.8
SYNGAP1-202ENST00000418600 PLS1Q14651 629 aa20.04■□□□□ 0.8
SYNGAP1-202ENST00000418600 NUTM1Q86Y26 1132 aa20.04■□□□□ 0.8
SYNGAP1-202ENST00000418600 JARID2Q92833 1246 aaPredicted RBP20.04■□□□□ 0.8
SYNGAP1-202ENST00000418600 ATF5Q9Y2D1 282 aaPredicted RBP20.04■□□□□ 0.8
SYNGAP1-202ENST00000418600 MAP3K5Q99683 1374 aa20.04■□□□□ 0.8
SYNGAP1-202ENST00000418600 RNMTO43148 476 aaKnown RBP20.04■□□□□ 0.8
SYNGAP1-202ENST00000418600 RBM6P78332 1123 aaKnown RBP20.04■□□□□ 0.8
SYNGAP1-202ENST00000418600 HOOK2Q96ED9 719 aa20.04■□□□□ 0.8
SYNGAP1-202ENST00000418600 SLC4A8Q2Y0W8 1093 aa20.04■□□□□ 0.8
SYNGAP1-202ENST00000418600 CHPF2Q9P2E5 772 aa20.04■□□□□ 0.8
SYNGAP1-202ENST00000418600 IRS4O14654 1257 aaPredicted RBP20.03■□□□□ 0.8
SYNGAP1-202ENST00000418600 RTN4Q9NQC3 1192 aaKnown RBP20.03■□□□□ 0.8
SYNGAP1-202ENST00000418600 GOLGA6L3A6NEY3 463 aa20.03■□□□□ 0.8
SYNGAP1-202ENST00000418600 UFL1O94874 794 aa20.03■□□□□ 0.8
SYNGAP1-202ENST00000418600 PICK1Q9NRD5 415 aa20.03■□□□□ 0.8
SYNGAP1-202ENST00000418600 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.03■□□□□ 0.8
SYNGAP1-202ENST00000418600 KDM5CP41229 1560 aa20.03■□□□□ 0.8
SYNGAP1-202ENST00000418600 H7C1D1 291 aa20.03■□□□□ 0.8
SYNGAP1-202ENST00000418600 KIF22Q14807 665 aa20.03■□□□□ 0.8
SYNGAP1-202ENST00000418600 PPP4R3BQ5MIZ7 849 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms