RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 BEND3Q5T5X7 828 aa11.29□□□□□ -0.6
LINCMD1-201ENST00000418518 NECTIN2Q92692 538 aa11.29□□□□□ -0.6
LINCMD1-201ENST00000418518 SRCIN1Q9C0H9 1055 aa11.29□□□□□ -0.6
LINCMD1-201ENST00000418518 USP44Q9H0E7 712 aa11.29□□□□□ -0.6
LINCMD1-201ENST00000418518 DDX21Q9NR30 783 aaKnown RBP eCLIP11.29□□□□□ -0.6
LINCMD1-201ENST00000418518 ALDH1L1O75891 902 aa11.28□□□□□ -0.6
LINCMD1-201ENST00000418518 EIF2S2P20042 333 aaKnown RBP11.28□□□□□ -0.6
LINCMD1-201ENST00000418518 PDIA6Q15084 440 aa11.28□□□□□ -0.6
LINCMD1-201ENST00000418518 PLEKHM2Q8IWE5 1019 aa11.28□□□□□ -0.6
LINCMD1-201ENST00000418518 PI4KAP2A4QPH2 592 aa11.27□□□□□ -0.61
LINCMD1-201ENST00000418518 ERVV-2B6SEH9 535 aa11.27□□□□□ -0.61
LINCMD1-201ENST00000418518 IL2RBP14784 551 aa11.27□□□□□ -0.61
LINCMD1-201ENST00000418518 POLA2Q14181 598 aa11.27□□□□□ -0.61
LINCMD1-201ENST00000418518 KSR2Q6VAB6 950 aa11.27□□□□□ -0.61
LINCMD1-201ENST00000418518 TOM1L2Q6ZVM7 507 aa11.27□□□□□ -0.61
LINCMD1-201ENST00000418518 ERICH6Q7L0X2 663 aa11.27□□□□□ -0.61
LINCMD1-201ENST00000418518 PI4KAP1Q8N8J0 262 aa11.27□□□□□ -0.61
LINCMD1-201ENST00000418518 ZCRB1Q8TBF4 217 aaKnown RBP11.27□□□□□ -0.61
LINCMD1-201ENST00000418518 SSH3Q8TE77 659 aa11.27□□□□□ -0.61
LINCMD1-201ENST00000418518 OSBPL3Q9H4L5 887 aa11.27□□□□□ -0.61
LINCMD1-201ENST00000418518 UPF2Q9HAU5 1272 aaKnown RBP11.27□□□□□ -0.61
LINCMD1-201ENST00000418518 UTYO14607 1347 aa11.27□□□□□ -0.61
LINCMD1-201ENST00000418518 ERBB4Q15303 1308 aa11.27□□□□□ -0.61
LINCMD1-201ENST00000418518 SALL3Q9BXA9 1300 aa11.27□□□□□ -0.61
LINCMD1-201ENST00000418518 TJP1Q07157 1748 aa11.26□□□□□ -0.61
LINCMD1-201ENST00000418518 UBTFL1P0CB47 393 aaPredicted RBP11.26□□□□□ -0.61
LINCMD1-201ENST00000418518 MTX1Q13505 466 aa11.26□□□□□ -0.61
LINCMD1-201ENST00000418518 PROSER3Q2NL68 480 aa11.26□□□□□ -0.61
LINCMD1-201ENST00000418518 LRP10Q7Z4F1 713 aa11.26□□□□□ -0.61
LINCMD1-201ENST00000418518 NFATC2IPQ8NCF5 419 aa11.26□□□□□ -0.61
LINCMD1-201ENST00000418518 ZNF496Q96IT1 587 aaPredicted RBP11.26□□□□□ -0.61
LINCMD1-201ENST00000418518 LRRFIP2Q9Y608 721 aaKnown RBP11.26□□□□□ -0.61
LINCMD1-201ENST00000418518 CICQ96RK0 1608 aaPredicted RBP11.26□□□□□ -0.61
LINCMD1-201ENST00000418518 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.26□□□□□ -0.61
LINCMD1-201ENST00000418518 PRAMEF22A3QJZ6 481 aa11.25□□□□□ -0.61
LINCMD1-201ENST00000418518 EIF5BO60841 1220 aaKnown RBP11.25□□□□□ -0.61
LINCMD1-201ENST00000418518 SNRPA1P09661 255 aaKnown RBP11.25□□□□□ -0.61
LINCMD1-201ENST00000418518 SLC39A6Q13433 755 aa11.25□□□□□ -0.61
LINCMD1-201ENST00000418518 TTC22Q5TAA0 569 aa11.25□□□□□ -0.61
LINCMD1-201ENST00000418518 FMNL2Q96PY5 1086 aa11.25□□□□□ -0.61
LINCMD1-201ENST00000418518 COL15A1P39059 1388 aa11.25□□□□□ -0.61
LINCMD1-201ENST00000418518 PNMA6EA0A0J9YXQ4 647 aa11.24□□□□□ -0.61
LINCMD1-201ENST00000418518 DDX58O95786 925 aaKnown RBP11.24□□□□□ -0.61
LINCMD1-201ENST00000418518 ANXA1P04083 346 aa11.24□□□□□ -0.61
LINCMD1-201ENST00000418518 GSPT1P15170 499 aaKnown RBP11.24□□□□□ -0.61
LINCMD1-201ENST00000418518 CABP4P57796 275 aa11.24□□□□□ -0.61
LINCMD1-201ENST00000418518 LARP1Q6PKG0 1096 aaKnown RBP11.24□□□□□ -0.61
LINCMD1-201ENST00000418518 LINS1Q8NG48 757 aa11.24□□□□□ -0.61
LINCMD1-201ENST00000418518 AOX1Q06278 1338 aa11.24□□□□□ -0.61
LINCMD1-201ENST00000418518 DOT1LQ8TEK3 1739 aa11.23□□□□□ -0.61
LINCMD1-201ENST00000418518 CDC45O75419 566 aa11.23□□□□□ -0.61
LINCMD1-201ENST00000418518 RBM25P49756 843 aaKnown RBP11.23□□□□□ -0.61
LINCMD1-201ENST00000418518 TTC5Q8N0Z6 440 aa11.23□□□□□ -0.61
LINCMD1-201ENST00000418518 HDAC5Q9UQL6 1122 aa11.23□□□□□ -0.61
LINCMD1-201ENST00000418518 MAP3K2Q9Y2U5 619 aa11.23□□□□□ -0.61
LINCMD1-201ENST00000418518 RAB11FIP3O75154 756 aa11.22□□□□□ -0.61
LINCMD1-201ENST00000418518 ANKRD36CQ5JPF3 1778 aa11.22□□□□□ -0.61
LINCMD1-201ENST00000418518 TBC1D9Q6ZT07 1266 aa11.22□□□□□ -0.61
LINCMD1-201ENST00000418518 LRRCC1Q9C099 1032 aa11.22□□□□□ -0.61
LINCMD1-201ENST00000418518 STAP2Q9UGK3 403 aa11.22□□□□□ -0.61
LINCMD1-201ENST00000418518 SMARCA5O60264 1052 aaPredicted RBP11.21□□□□□ -0.61
LINCMD1-201ENST00000418518 NBPF7P0C2Y1 421 aaPredicted RBP11.21□□□□□ -0.61
LINCMD1-201ENST00000418518 OTUD7AQ8TE49 926 aaPredicted RBP11.21□□□□□ -0.61
LINCMD1-201ENST00000418518 C22orf23Q9BZE7 217 aa11.21□□□□□ -0.61
LINCMD1-201ENST00000418518 RREB1Q92766 1687 aa11.2□□□□□ -0.62
LINCMD1-201ENST00000418518 PDE1AP54750 535 aa11.2□□□□□ -0.62
LINCMD1-201ENST00000418518 MFAP1P55081 439 aaKnown RBP11.2□□□□□ -0.62
LINCMD1-201ENST00000418518 EVA1CP58658 441 aa11.2□□□□□ -0.62
LINCMD1-201ENST00000418518 PPP1R42Q7Z4L9 355 aa11.2□□□□□ -0.62
LINCMD1-201ENST00000418518 C16orf71Q8IYS4 520 aaPredicted RBP11.2□□□□□ -0.62
LINCMD1-201ENST00000418518 METTL22Q9BUU2 404 aaPredicted RBP11.2□□□□□ -0.62
LINCMD1-201ENST00000418518 STRN4Q9NRL3 753 aa11.2□□□□□ -0.62
LINCMD1-201ENST00000418518 BTG4Q9NY30 223 aa11.2□□□□□ -0.62
LINCMD1-201ENST00000418518 USP16Q9Y5T5 823 aa11.2□□□□□ -0.62
LINCMD1-201ENST00000418518 SLIT2O94813 1529 aa11.19□□□□□ -0.62
LINCMD1-201ENST00000418518 USP42Q9H9J4 1324 aaKnown RBP11.19□□□□□ -0.62
LINCMD1-201ENST00000418518 GRM8O00222 908 aa11.19□□□□□ -0.62
LINCMD1-201ENST00000418518 IGKV5-2P06315 115 aa11.19□□□□□ -0.62
LINCMD1-201ENST00000418518 BECN1Q14457 450 aa11.19□□□□□ -0.62
LINCMD1-201ENST00000418518 HSP90AB4PQ58FF6 505 aa11.19□□□□□ -0.62
LINCMD1-201ENST00000418518 XAGE3Q8WTP9 111 aa11.19□□□□□ -0.62
LINCMD1-201ENST00000418518 EXOC6BQ9Y2D4 811 aa11.19□□□□□ -0.62
LINCMD1-201ENST00000418518 ZNF831Q5JPB2 1677 aa11.19□□□□□ -0.62
LINCMD1-201ENST00000418518 NEURL1BA8MQ27 555 aa11.18□□□□□ -0.62
LINCMD1-201ENST00000418518 SDSP20132 328 aa11.18□□□□□ -0.62
LINCMD1-201ENST00000418518 BCL9O00512 1426 aa11.18□□□□□ -0.62
LINCMD1-201ENST00000418518 SRGAP3O43295 1099 aa11.17□□□□□ -0.62
LINCMD1-201ENST00000418518 MX1P20591 662 aa11.17□□□□□ -0.62
LINCMD1-201ENST00000418518 CWF19L2Q2TBE0 894 aaKnown RBP11.17□□□□□ -0.62
LINCMD1-201ENST00000418518 COPS6Q7L5N1 327 aa11.17□□□□□ -0.62
LINCMD1-201ENST00000418518 RIC3Q7Z5B4 369 aa11.17□□□□□ -0.62
LINCMD1-201ENST00000418518 VSIG10Q8N0Z9 540 aa11.17□□□□□ -0.62
LINCMD1-201ENST00000418518 PLBD2Q8NHP8 589 aa11.17□□□□□ -0.62
LINCMD1-201ENST00000418518 KIF1BPQ96EK5 621 aa11.17□□□□□ -0.62
LINCMD1-201ENST00000418518 KAZALD1Q96I82 304 aa11.17□□□□□ -0.62
LINCMD1-201ENST00000418518 CDCA7Q9BWT1 371 aaPredicted RBP11.17□□□□□ -0.62
LINCMD1-201ENST00000418518 MYH3P11055 1940 aa11.17□□□□□ -0.62
LINCMD1-201ENST00000418518 KAT6BQ8WYB5 2073 aa11.16□□□□□ -0.62
LINCMD1-201ENST00000418518 NBPF26B4DH59 902 aa11.16□□□□□ -0.62
LINCMD1-201ENST00000418518 NEXNQ0ZGT2 675 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms