RNA–Protein interactions for RNA: ENST00000417652.5

NCL-203, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-203ENST00000417652 RPS6KA4O75676 772 aa8.98□□□□□ -0.97
NCL-203ENST00000417652 DSG3P32926 999 aa8.98□□□□□ -0.97
NCL-203ENST00000417652 MSL1Q68DK7 614 aa8.98□□□□□ -0.97
NCL-203ENST00000417652 SMIM5Q71RC9 77 aa8.98□□□□□ -0.97
NCL-203ENST00000417652 CNTNAP4Q9C0A0 1308 aa8.98□□□□□ -0.97
NCL-203ENST00000417652 C5P01031 1676 aa8.97□□□□□ -0.97
NCL-203ENST00000417652 TAF1LQ8IZX4 1826 aa8.97□□□□□ -0.97
NCL-203ENST00000417652 CYP19A1P11511 503 aaPredicted RBP8.97□□□□□ -0.97
NCL-203ENST00000417652 ARHGEF1Q92888 912 aaKnown RBP8.97□□□□□ -0.97
NCL-203ENST00000417652 HEG1Q9ULI3 1381 aa8.97□□□□□ -0.97
NCL-203ENST00000417652 C4BP0C0L5 1744 aa8.97□□□□□ -0.97
NCL-203ENST00000417652 MRC1P22897 1456 aa8.96□□□□□ -0.97
NCL-203ENST00000417652 A0A087WZG4 1122 aa8.96□□□□□ -0.98
NCL-203ENST00000417652 BABAM1Q9NWV8 329 aa8.96□□□□□ -0.98
NCL-203ENST00000417652 TRIM35Q9UPQ4 493 aa8.96□□□□□ -0.98
NCL-203ENST00000417652 CCER2I3L3R5 266 aa8.95□□□□□ -0.98
NCL-203ENST00000417652 A1BGP04217 495 aa8.95□□□□□ -0.98
NCL-203ENST00000417652 EIF2S2P20042 333 aaKnown RBP8.95□□□□□ -0.98
NCL-203ENST00000417652 GNAI1P63096 354 aa8.95□□□□□ -0.98
NCL-203ENST00000417652 INTS5Q6P9B9 1019 aaKnown RBP8.95□□□□□ -0.98
NCL-203ENST00000417652 NLGN1Q8N2Q7 840 aa8.95□□□□□ -0.98
NCL-203ENST00000417652 NGEFQ8N5V2 710 aa8.95□□□□□ -0.98
NCL-203ENST00000417652 USP16Q9Y5T5 823 aa8.95□□□□□ -0.98
NCL-203ENST00000417652 ADAMTS7Q9UKP4 1686 aa8.94□□□□□ -0.98
NCL-203ENST00000417652 CHL1O00533 1208 aa8.94□□□□□ -0.98
NCL-203ENST00000417652 EIF4A1P60842 406 aaKnown RBP8.94□□□□□ -0.98
NCL-203ENST00000417652 MIER1Q8N108 512 aa8.94□□□□□ -0.98
NCL-203ENST00000417652 CFAP44Q96MT7 982 aa8.94□□□□□ -0.98
NCL-203ENST00000417652 ZBTB1Q9Y2K1 713 aa8.94□□□□□ -0.98
NCL-203ENST00000417652 U3KPZ7 1027 aaPredicted RBP8.94□□□□□ -0.98
NCL-203ENST00000417652 PAPPAQ13219 1627 aa8.94□□□□□ -0.98
NCL-203ENST00000417652 PRAMEF22A3QJZ6 481 aa8.93□□□□□ -0.98
NCL-203ENST00000417652 NPHP1O15259 732 aa8.93□□□□□ -0.98
NCL-203ENST00000417652 GIGYF1O75420 1035 aaPredicted RBP8.93□□□□□ -0.98
NCL-203ENST00000417652 NPM3O75607 178 aaKnown RBP8.93□□□□□ -0.98
NCL-203ENST00000417652 MYL6BP14649 208 aa8.93□□□□□ -0.98
NCL-203ENST00000417652 IL6STP40189 918 aaPredicted RBP8.93□□□□□ -0.98
NCL-203ENST00000417652 PIP4K2AP48426 406 aaPredicted RBP8.93□□□□□ -0.98
NCL-203ENST00000417652 USPL1Q5W0Q7 1092 aa8.93□□□□□ -0.98
NCL-203ENST00000417652 AMIGO3Q86WK7 504 aa8.93□□□□□ -0.98
NCL-203ENST00000417652 NECTIN2Q92692 538 aa8.93□□□□□ -0.98
NCL-203ENST00000417652 SPINK5Q9NQ38 1064 aaPredicted RBP8.93□□□□□ -0.98
NCL-203ENST00000417652 IFT57Q9NWB7 429 aa8.93□□□□□ -0.98
NCL-203ENST00000417652 SRP68Q9UHB9 627 aaKnown RBP8.93□□□□□ -0.98
NCL-203ENST00000417652 TBC1D2BQ9UPU7 963 aa8.93□□□□□ -0.98
NCL-203ENST00000417652 PARP3Q9Y6F1 533 aa8.93□□□□□ -0.98
NCL-203ENST00000417652 KCPQ6ZWJ8 1503 aa8.93□□□□□ -0.98
NCL-203ENST00000417652 MYH14Q7Z406 1995 aaKnown RBP8.92□□□□□ -0.98
NCL-203ENST00000417652 SIPA1L3O60292 1781 aaPredicted RBP8.92□□□□□ -0.98
NCL-203ENST00000417652 ZNF831Q5JPB2 1677 aa8.92□□□□□ -0.98
NCL-203ENST00000417652 MMP10P09238 476 aa8.92□□□□□ -0.98
NCL-203ENST00000417652 PTGER2P43116 358 aa8.92□□□□□ -0.98
NCL-203ENST00000417652 CCDC27Q2M243 656 aa8.92□□□□□ -0.98
NCL-203ENST00000417652 BICDL1Q6ZP65 573 aa8.92□□□□□ -0.98
NCL-203ENST00000417652 DZIP3Q86Y13 1208 aaKnown RBP8.92□□□□□ -0.98
NCL-203ENST00000417652 WWC1Q8IX03 1113 aa8.92□□□□□ -0.98
NCL-203ENST00000417652 CHMP4AQ9BY43 222 aa8.92□□□□□ -0.98
NCL-203ENST00000417652 UBR3Q6ZT12 1888 aa8.91□□□□□ -0.98
NCL-203ENST00000417652 TUBGCP6Q96RT7 1819 aa8.91□□□□□ -0.98
NCL-203ENST00000417652 SRCAPQ6ZRS2 3230 aa8.91□□□□□ -0.98
NCL-203ENST00000417652 COL15A1P39059 1388 aa8.91□□□□□ -0.98
NCL-203ENST00000417652 SOS1Q07889 1333 aaPredicted RBP8.91□□□□□ -0.98
NCL-203ENST00000417652 ELL2O00472 640 aaPredicted RBP8.91□□□□□ -0.98
NCL-203ENST00000417652 GYS1P13807 737 aa8.91□□□□□ -0.98
NCL-203ENST00000417652 EIF5P55010 431 aaKnown RBP8.91□□□□□ -0.98
NCL-203ENST00000417652 KIF6Q6ZMV9 814 aa8.91□□□□□ -0.98
NCL-203ENST00000417652 PELP1Q8IZL8 1130 aaKnown RBP8.91□□□□□ -0.98
NCL-203ENST00000417652 FHDC1Q9C0D6 1143 aaPredicted RBP8.91□□□□□ -0.98
NCL-203ENST00000417652 MBIPQ9NS73 344 aa8.91□□□□□ -0.98
NCL-203ENST00000417652 NARFQ9UHQ1 456 aa8.91□□□□□ -0.98
NCL-203ENST00000417652 ZNF652Q9Y2D9 606 aa8.91□□□□□ -0.98
NCL-203ENST00000417652 CASZ1Q86V15 1759 aa8.91□□□□□ -0.98
NCL-203ENST00000417652 QSER1Q2KHR3 1735 aa8.91□□□□□ -0.98
NCL-203ENST00000417652 USP42Q9H9J4 1324 aaKnown RBP8.9□□□□□ -0.98
NCL-203ENST00000417652 FKBP8Q14318 412 aa8.9□□□□□ -0.98
NCL-203ENST00000417652 HDGFL1Q5TGJ6 251 aa8.9□□□□□ -0.98
NCL-203ENST00000417652 DUSP27Q5VZP5 1158 aa8.9□□□□□ -0.98
NCL-203ENST00000417652 WDR63Q8IWG1 891 aa8.9□□□□□ -0.98
NCL-203ENST00000417652 MYH16Q9H6N6 1097 aa8.9□□□□□ -0.98
NCL-203ENST00000417652 UBR2Q8IWV8 1755 aa8.9□□□□□ -0.98
NCL-203ENST00000417652 COL5A3P25940 1745 aaPredicted RBP8.9□□□□□ -0.98
NCL-203ENST00000417652 TJP1Q07157 1748 aa8.9□□□□□ -0.98
NCL-203ENST00000417652 GOLGA2Q08379 1002 aa8.89□□□□□ -0.99
NCL-203ENST00000417652 AIMP1Q12904 312 aaKnown RBP8.89□□□□□ -0.99
NCL-203ENST00000417652 KRT24Q2M2I5 525 aa8.89□□□□□ -0.99
NCL-203ENST00000417652 TSR2Q969E8 191 aaKnown RBP8.89□□□□□ -0.99
NCL-203ENST00000417652 SETDB2Q96T68 719 aa8.89□□□□□ -0.99
NCL-203ENST00000417652 SYT17Q9BSW7 474 aa8.89□□□□□ -0.99
NCL-203ENST00000417652 LRP5O75197 1615 aa8.89□□□□□ -0.99
NCL-203ENST00000417652 IL16Q14005 1332 aa8.88□□□□□ -0.99
NCL-203ENST00000417652 NBPF26B4DH59 902 aa8.88□□□□□ -0.99
NCL-203ENST00000417652 ZNF853P0CG23 659 aa8.88□□□□□ -0.99
NCL-203ENST00000417652 GTF2E1P29083 439 aaPredicted RBP8.88□□□□□ -0.99
NCL-203ENST00000417652 GPR162Q16538 588 aa8.88□□□□□ -0.99
NCL-203ENST00000417652 NBPF10Q6P3W6 841 aaKnown RBP8.88□□□□□ -0.99
NCL-203ENST00000417652 NBPF15Q8N660 670 aa8.88□□□□□ -0.99
NCL-203ENST00000417652 SGIP1Q9BQI5 828 aa8.88□□□□□ -0.99
NCL-203ENST00000417652 STK31Q9BXU1 1019 aa8.88□□□□□ -0.99
NCL-203ENST00000417652 DBF4Q9UBU7 674 aaPredicted RBP8.88□□□□□ -0.99
NCL-203ENST00000417652 ERBB4Q15303 1308 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms