RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-231ENST00000417521 ZPR1O75312 459 aa21.64■■□□□ 1.06
DDR1-231ENST00000417521 CANXP27824 592 aaKnown RBP21.64■■□□□ 1.05
DDR1-231ENST00000417521 PARP3Q9Y6F1 533 aa21.64■■□□□ 1.05
DDR1-231ENST00000417521 UTRNP46939 3433 aa21.63■■□□□ 1.05
DDR1-231ENST00000417521 EIF5P55010 431 aaKnown RBP21.63■■□□□ 1.05
DDR1-231ENST00000417521 FKBP8Q14318 412 aa21.63■■□□□ 1.05
DDR1-231ENST00000417521 PELP1Q8IZL8 1130 aaKnown RBP21.63■■□□□ 1.05
DDR1-231ENST00000417521 NARFQ9UHQ1 456 aa21.63■■□□□ 1.05
DDR1-231ENST00000417521 MYH14Q7Z406 1995 aaKnown RBP21.62■■□□□ 1.05
DDR1-231ENST00000417521 PNISRQ8TF01 805 aaKnown RBP21.62■■□□□ 1.05
DDR1-231ENST00000417521 COL15A1P39059 1388 aa21.62■■□□□ 1.05
DDR1-231ENST00000417521 ANP32CO43423 234 aa21.61■■□□□ 1.05
DDR1-231ENST00000417521 GRIN3BO60391 1043 aa21.61■■□□□ 1.05
DDR1-231ENST00000417521 SNRPA1P09661 255 aaKnown RBP21.61■■□□□ 1.05
DDR1-231ENST00000417521 USPL1Q5W0Q7 1092 aa21.61■■□□□ 1.05
DDR1-231ENST00000417521 A0A087WZG4 1122 aa21.6■■□□□ 1.05
DDR1-231ENST00000417521 WDR43Q15061 677 aaKnown RBP eCLIP21.6■■□□□ 1.05
DDR1-231ENST00000417521 TM4SF1P30408 202 aa21.59■■□□□ 1.05
DDR1-231ENST00000417521 IL6STP40189 918 aaPredicted RBP21.59■■□□□ 1.05
DDR1-231ENST00000417521 TGFB2P61812 414 aa21.59■■□□□ 1.05
DDR1-231ENST00000417521 USP16Q9Y5T5 823 aa21.59■■□□□ 1.05
DDR1-231ENST00000417521 YBX3P16989 372 aaKnown RBP eCLIP21.58■■□□□ 1.05
DDR1-231ENST00000417521 RIPK4P57078 832 aa21.58■■□□□ 1.05
DDR1-231ENST00000417521 DIEXFQ68CQ4 756 aaKnown RBP21.58■■□□□ 1.05
DDR1-231ENST00000417521 UBR2Q8IWV8 1755 aa21.58■■□□□ 1.05
DDR1-231ENST00000417521 A1BGP04217 495 aa21.58■■□□□ 1.04
DDR1-231ENST00000417521 MIS18AQ9NYP9 233 aa21.58■■□□□ 1.04
DDR1-231ENST00000417521 TMPOP42166 694 aaKnown RBP21.57■■□□□ 1.04
DDR1-231ENST00000417521 DDR1Q08345 913 aa21.57■■□□□ 1.04
DDR1-231ENST00000417521 BCL2L12Q9HB09 334 aa21.57■■□□□ 1.04
DDR1-231ENST00000417521 SIPA1L3O60292 1781 aaPredicted RBP21.56■■□□□ 1.04
DDR1-231ENST00000417521 POLRMTO00411 1230 aaKnown RBP21.56■■□□□ 1.04
DDR1-231ENST00000417521 LMOD3Q0VAK6 560 aa21.56■■□□□ 1.04
DDR1-231ENST00000417521 NPM2Q86SE8 214 aaKnown RBP21.56■■□□□ 1.04
DDR1-231ENST00000417521 THUMPD2Q9BTF0 503 aaKnown RBP21.56■■□□□ 1.04
DDR1-231ENST00000417521 ADAMTS8Q9UP79 889 aa21.56■■□□□ 1.04
DDR1-231ENST00000417521 PRAMEF22A3QJZ6 481 aa21.55■■□□□ 1.04
DDR1-231ENST00000417521 RUNDC1Q96C34 613 aa21.55■■□□□ 1.04
DDR1-231ENST00000417521 C10orf71Q711Q0 1435 aa21.55■■□□□ 1.04
DDR1-231ENST00000417521 NFIXQ14938 502 aa21.54■■□□□ 1.04
DDR1-231ENST00000417521 ZNF330Q9Y3S2 320 aaPredicted RBP21.54■■□□□ 1.04
DDR1-231ENST00000417521 GOLGB1Q14789 3259 aaKnown RBP21.54■■□□□ 1.04
DDR1-231ENST00000417521 VIRMAQ69YN4 1812 aaKnown RBP21.54■■□□□ 1.04
DDR1-231ENST00000417521 CCDC146Q8IYE0 955 aa21.53■■□□□ 1.04
DDR1-231ENST00000417521 EIF4A1P60842 406 aaKnown RBP21.52■■□□□ 1.04
DDR1-231ENST00000417521 TBC1D2BQ9UPU7 963 aa21.52■■□□□ 1.04
DDR1-231ENST00000417521 A0A0G2JLW4 131 aa21.52■■□□□ 1.03
DDR1-231ENST00000417521 BABAM1Q9NWV8 329 aa21.52■■□□□ 1.03
DDR1-231ENST00000417521 C4AP0C0L4 1744 aa21.51■■□□□ 1.03
DDR1-231ENST00000417521 GIGYF1O75420 1035 aaPredicted RBP21.51■■□□□ 1.03
DDR1-231ENST00000417521 PXDNLA1KZ92 1463 aa21.5■■□□□ 1.03
DDR1-231ENST00000417521 RRP7AQ9Y3A4 280 aaKnown RBP21.5■■□□□ 1.03
DDR1-231ENST00000417521 CAMTA2O94983 1202 aa21.49■■□□□ 1.03
DDR1-231ENST00000417521 SERPINB2P05120 415 aa21.49■■□□□ 1.03
DDR1-231ENST00000417521 DPEP1P16444 411 aa21.49■■□□□ 1.03
DDR1-231ENST00000417521 NEUROD2Q15784 382 aa21.49■■□□□ 1.03
DDR1-231ENST00000417521 CCDC184Q52MB2 194 aa21.49■■□□□ 1.03
DDR1-231ENST00000417521 DZIP3Q86Y13 1208 aaKnown RBP21.49■■□□□ 1.03
DDR1-231ENST00000417521 TSPYL4Q9UJ04 414 aa21.49■■□□□ 1.03
DDR1-231ENST00000417521 NBPF26B4DH59 902 aa21.48■■□□□ 1.03
DDR1-231ENST00000417521 PIP4K2AP48426 406 aaPredicted RBP21.48■■□□□ 1.03
DDR1-231ENST00000417521 NBPF10Q6P3W6 841 aaKnown RBP21.48■■□□□ 1.03
DDR1-231ENST00000417521 NBPF15Q8N660 670 aa21.48■■□□□ 1.03
DDR1-231ENST00000417521 WWC3Q9ULE0 1092 aa21.48■■□□□ 1.03
DDR1-231ENST00000417521 TBC1D9BQ66K14 1250 aa21.47■■□□□ 1.03
DDR1-231ENST00000417521 ZNF784Q8NCA9 323 aaPredicted RBP21.47■■□□□ 1.03
DDR1-231ENST00000417521 KCNA3P22001 575 aa21.46■■□□□ 1.03
DDR1-231ENST00000417521 CLEC4GQ6UXB4 293 aa21.46■■□□□ 1.03
DDR1-231ENST00000417521 BICDL1Q6ZP65 573 aa21.46■■□□□ 1.03
DDR1-231ENST00000417521 TRIM35Q9UPQ4 493 aa21.46■■□□□ 1.03
DDR1-231ENST00000417521 RGL2O15211 777 aa21.45■■□□□ 1.03
DDR1-231ENST00000417521 PIM2Q9P1W9 311 aa21.45■■□□□ 1.02
DDR1-231ENST00000417521 BCS1LQ9Y276 419 aa21.45■■□□□ 1.02
DDR1-231ENST00000417521 C1QTNF8P60827 252 aa21.44■■□□□ 1.02
DDR1-231ENST00000417521 SETDB2Q96T68 719 aa21.44■■□□□ 1.02
DDR1-231ENST00000417521 CHL1O00533 1208 aa21.43■■□□□ 1.02
DDR1-231ENST00000417521 ZNF652Q9Y2D9 606 aa21.43■■□□□ 1.02
DDR1-231ENST00000417521 CARMIL3Q8ND23 1372 aa21.42■■□□□ 1.02
DDR1-231ENST00000417521 CHRNA5P30532 468 aa21.41■■□□□ 1.02
DDR1-231ENST00000417521 MIER1Q8N108 512 aa21.41■■□□□ 1.02
DDR1-231ENST00000417521 ERBB4Q15303 1308 aa21.41■■□□□ 1.02
DDR1-231ENST00000417521 APAF1O14727 1248 aa21.4■■□□□ 1.02
DDR1-231ENST00000417521 DALRD3Q5D0E6 543 aaKnown RBP21.4■■□□□ 1.02
DDR1-231ENST00000417521 MRS2Q9HD23 443 aa21.4■■□□□ 1.02
DDR1-231ENST00000417521 KIF13BQ9NQT8 1826 aa21.4■■□□□ 1.02
DDR1-231ENST00000417521 DLG5Q8TDM6 1919 aa21.4■■□□□ 1.02
DDR1-231ENST00000417521 PRR5LQ6MZQ0 368 aa21.39■■□□□ 1.01
DDR1-231ENST00000417521 BRIP1Q9BX63 1249 aa21.39■■□□□ 1.01
DDR1-231ENST00000417521 PDZRN3Q9UPQ7 1066 aa21.39■■□□□ 1.01
DDR1-231ENST00000417521 ERVV-1B6SEH8 477 aa21.38■■□□□ 1.01
DDR1-231ENST00000417521 CFAP44Q96MT7 982 aa21.38■■□□□ 1.01
DDR1-231ENST00000417521 KDM3BQ7LBC6 1761 aa21.37■■□□□ 1.01
DDR1-231ENST00000417521 MYL6BP14649 208 aa21.37■■□□□ 1.01
DDR1-231ENST00000417521 NGEFQ8N5V2 710 aa21.37■■□□□ 1.01
DDR1-231ENST00000417521 CNBD1Q8NA66 436 aa21.37■■□□□ 1.01
DDR1-231ENST00000417521 LAS1LQ9Y4W2 734 aaKnown RBP21.37■■□□□ 1.01
DDR1-231ENST00000417521 H0YIN7 160 aa21.36■■□□□ 1.01
DDR1-231ENST00000417521 PDE6BP35913 854 aa21.36■■□□□ 1.01
DDR1-231ENST00000417521 ARHGAP27Q6ZUM4 889 aa21.36■■□□□ 1.01
DDR1-231ENST00000417521 C2CD5Q86YS7 1000 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms