RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 DNAJC10Q8IXB1 793 aa18.65■□□□□ 0.58
SGCE-202ENST00000415788 C8orf58Q8NAV2 365 aa18.65■□□□□ 0.58
SGCE-202ENST00000415788 CT47B1P0C2W7 299 aaPredicted RBP18.65■□□□□ 0.58
SGCE-202ENST00000415788 ITPK1Q13572 414 aa18.65■□□□□ 0.58
SGCE-202ENST00000415788 TWISTNBQ3B726 338 aaPredicted RBP18.65■□□□□ 0.58
SGCE-202ENST00000415788 LRRC4BQ9NT99 713 aa18.65■□□□□ 0.58
SGCE-202ENST00000415788 ELL2O00472 640 aaPredicted RBP18.63■□□□□ 0.57
SGCE-202ENST00000415788 CYP19A1P11511 503 aaPredicted RBP18.63■□□□□ 0.57
SGCE-202ENST00000415788 TSPYL6Q8N831 410 aa18.63■□□□□ 0.57
SGCE-202ENST00000415788 USP16Q9Y5T5 823 aa18.63■□□□□ 0.57
SGCE-202ENST00000415788 PRAMEF22A3QJZ6 481 aa18.62■□□□□ 0.57
SGCE-202ENST00000415788 KCNQ4P56696 695 aa18.62■□□□□ 0.57
SGCE-202ENST00000415788 LINC00116Q8NCU8 138 aa18.62■□□□□ 0.57
SGCE-202ENST00000415788 ZNF428Q96B54 188 aa18.62■□□□□ 0.57
SGCE-202ENST00000415788 ERBB4Q15303 1308 aa18.62■□□□□ 0.57
SGCE-202ENST00000415788 CNTNAP4Q9C0A0 1308 aa18.62■□□□□ 0.57
SGCE-202ENST00000415788 C5P01031 1676 aa18.61■□□□□ 0.57
SGCE-202ENST00000415788 TJP1Q07157 1748 aa18.61■□□□□ 0.57
SGCE-202ENST00000415788 RC3H1Q5TC82 1133 aaKnown RBP18.61■□□□□ 0.57
SGCE-202ENST00000415788 HDGFL1Q5TGJ6 251 aa18.61■□□□□ 0.57
SGCE-202ENST00000415788 VAMP4O75379 141 aa18.6■□□□□ 0.57
SGCE-202ENST00000415788 CCDC30Q5VVM6 783 aa18.6■□□□□ 0.57
SGCE-202ENST00000415788 CCDC87Q9NVE4 849 aa18.6■□□□□ 0.57
SGCE-202ENST00000415788 RREB1Q92766 1687 aa18.59■□□□□ 0.57
SGCE-202ENST00000415788 EIF2S2P20042 333 aaKnown RBP18.59■□□□□ 0.57
SGCE-202ENST00000415788 CRKLP46109 303 aaKnown RBP18.59■□□□□ 0.57
SGCE-202ENST00000415788 LAMB4A4D0S4 1761 aa18.59■□□□□ 0.57
SGCE-202ENST00000415788 COL5A3P25940 1745 aaPredicted RBP18.58■□□□□ 0.57
SGCE-202ENST00000415788 AK7Q96M32 723 aa18.58■□□□□ 0.56
SGCE-202ENST00000415788 SOCS7O14512 581 aa18.57■□□□□ 0.56
SGCE-202ENST00000415788 INTS5Q6P9B9 1019 aaKnown RBP18.57■□□□□ 0.56
SGCE-202ENST00000415788 DBF4Q9UBU7 674 aaPredicted RBP18.57■□□□□ 0.56
SGCE-202ENST00000415788 C4BP0C0L5 1744 aa18.57■□□□□ 0.56
SGCE-202ENST00000415788 STK31Q9BXU1 1019 aa18.56■□□□□ 0.56
SGCE-202ENST00000415788 A1BGP04217 495 aa18.56■□□□□ 0.56
SGCE-202ENST00000415788 NBPF14Q5TI25 921 aa18.56■□□□□ 0.56
SGCE-202ENST00000415788 AKT1S1Q96B36 256 aa18.56■□□□□ 0.56
SGCE-202ENST00000415788 ZBTB1Q9Y2K1 713 aa18.56■□□□□ 0.56
SGCE-202ENST00000415788 TAF1LQ8IZX4 1826 aa18.56■□□□□ 0.56
SGCE-202ENST00000415788 IL6STP40189 918 aaPredicted RBP18.55■□□□□ 0.56
SGCE-202ENST00000415788 DDX21Q9NR30 783 aaKnown RBP eCLIP18.55■□□□□ 0.56
SGCE-202ENST00000415788 STK32BQ9NY57 414 aa18.55■□□□□ 0.56
SGCE-202ENST00000415788 NUP188Q5SRE5 1749 aa18.55■□□□□ 0.56
SGCE-202ENST00000415788 GNPATO15228 680 aa18.54■□□□□ 0.56
SGCE-202ENST00000415788 RPS6KA4O75676 772 aa18.54■□□□□ 0.56
SGCE-202ENST00000415788 ALDH1L2Q3SY69 923 aa18.54■□□□□ 0.56
SGCE-202ENST00000415788 NECTIN2Q92692 538 aa18.54■□□□□ 0.56
SGCE-202ENST00000415788 CHPF2Q9P2E5 772 aa18.54■□□□□ 0.56
SGCE-202ENST00000415788 RTCBQ9Y3I0 505 aaKnown RBP18.54■□□□□ 0.56
SGCE-202ENST00000415788 CANXP27824 592 aaKnown RBP18.54■□□□□ 0.56
SGCE-202ENST00000415788 NPM2Q86SE8 214 aaKnown RBP18.54■□□□□ 0.56
SGCE-202ENST00000415788 HYPKQ9NX55 129 aa18.54■□□□□ 0.56
SGCE-202ENST00000415788 NBPF26B4DH59 902 aa18.53■□□□□ 0.56
SGCE-202ENST00000415788 ADRA2BP18089 450 aa18.53■□□□□ 0.56
SGCE-202ENST00000415788 SSFA2P28290 1259 aa18.53■□□□□ 0.56
SGCE-202ENST00000415788 PDIA6Q15084 440 aa18.53■□□□□ 0.56
SGCE-202ENST00000415788 SLC15A2Q16348 729 aa18.53■□□□□ 0.56
SGCE-202ENST00000415788 NBPF10Q6P3W6 841 aaKnown RBP18.53■□□□□ 0.56
SGCE-202ENST00000415788 NBPF15Q8N660 670 aa18.53■□□□□ 0.56
SGCE-202ENST00000415788 TFCP2L1Q9NZI6 479 aa18.53■□□□□ 0.56
SGCE-202ENST00000415788 ZNF827Q17R98 1081 aa18.52■□□□□ 0.56
SGCE-202ENST00000415788 FLAD1Q8NFF5 587 aa18.52■□□□□ 0.56
SGCE-202ENST00000415788 EIF5P55010 431 aaKnown RBP18.52■□□□□ 0.55
SGCE-202ENST00000415788 B4GALNT3Q6L9W6 998 aa18.52■□□□□ 0.55
SGCE-202ENST00000415788 ANO8Q9HCE9 1232 aaPredicted RBP18.52■□□□□ 0.55
SGCE-202ENST00000415788 A0A087WZG4 1122 aa18.51■□□□□ 0.55
SGCE-202ENST00000415788 NOP58Q9Y2X3 529 aaKnown RBP18.51■□□□□ 0.55
SGCE-202ENST00000415788 SLC4A2P04920 1241 aa18.5■□□□□ 0.55
SGCE-202ENST00000415788 MYL6BP14649 208 aa18.5■□□□□ 0.55
SGCE-202ENST00000415788 RARSP54136 660 aaKnown RBP18.5■□□□□ 0.55
SGCE-202ENST00000415788 PIP4K2AP48426 406 aaPredicted RBP18.5■□□□□ 0.55
SGCE-202ENST00000415788 PROSER3Q2NL68 480 aa18.5■□□□□ 0.55
SGCE-202ENST00000415788 TRAPPC3LQ5T215 181 aa18.5■□□□□ 0.55
SGCE-202ENST00000415788 LRP10Q7Z4F1 713 aa18.5■□□□□ 0.55
SGCE-202ENST00000415788 SSH1Q8WYL5 1049 aa18.5■□□□□ 0.55
SGCE-202ENST00000415788 COL15A1P39059 1388 aa18.49■□□□□ 0.55
SGCE-202ENST00000415788 MYH14Q7Z406 1995 aaKnown RBP18.49■□□□□ 0.55
SGCE-202ENST00000415788 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.49■□□□□ 0.55
SGCE-202ENST00000415788 SMC4Q9NTJ3 1288 aa18.49■□□□□ 0.55
SGCE-202ENST00000415788 ZNF330Q9Y3S2 320 aaPredicted RBP18.49■□□□□ 0.55
SGCE-202ENST00000415788 TCERG1O14776 1098 aaKnown RBP18.48■□□□□ 0.55
SGCE-202ENST00000415788 DEKP35659 375 aaKnown RBP18.48■□□□□ 0.55
SGCE-202ENST00000415788 BRPF1P55201 1214 aaPredicted RBP18.48■□□□□ 0.55
SGCE-202ENST00000415788 RNF123Q5XPI4 1314 aa18.48■□□□□ 0.55
SGCE-202ENST00000415788 ANXA1P04083 346 aa18.48■□□□□ 0.55
SGCE-202ENST00000415788 RCAN3Q9UKA8 241 aa18.48■□□□□ 0.55
SGCE-202ENST00000415788 PHF14O94880 888 aa18.47■□□□□ 0.55
SGCE-202ENST00000415788 MRPL50Q8N5N7 158 aaKnown RBP18.47■□□□□ 0.55
SGCE-202ENST00000415788 ARHGEF1Q92888 912 aaKnown RBP18.46■□□□□ 0.55
SGCE-202ENST00000415788 UBR3Q6ZT12 1888 aa18.46■□□□□ 0.55
SGCE-202ENST00000415788 PNPLA7Q6ZV29 1317 aa18.46■□□□□ 0.55
SGCE-202ENST00000415788 KIF16BQ96L93 1317 aa18.46■□□□□ 0.55
SGCE-202ENST00000415788 RGL2O15211 777 aa18.46■□□□□ 0.54
SGCE-202ENST00000415788 DDX58O95786 925 aaKnown RBP18.46■□□□□ 0.54
SGCE-202ENST00000415788 RFC4P35249 363 aa18.46■□□□□ 0.54
SGCE-202ENST00000415788 KIF6Q6ZMV9 814 aa18.46■□□□□ 0.54
SGCE-202ENST00000415788 COPS6Q7L5N1 327 aa18.46■□□□□ 0.54
SGCE-202ENST00000415788 AMIGO3Q86WK7 504 aa18.46■□□□□ 0.54
SGCE-202ENST00000415788 DZIP3Q86Y13 1208 aaKnown RBP18.46■□□□□ 0.54
SGCE-202ENST00000415788 XAGE3Q8WTP9 111 aa18.46■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms