RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 C22orf23Q9BZE7 217 aa16.76■□□□□ 0.27
SSR4P1-201ENST00000415143 HDAC5Q9UQL6 1122 aa16.76■□□□□ 0.27
SSR4P1-201ENST00000415143 FLIIQ13045 1269 aa16.75■□□□□ 0.27
SSR4P1-201ENST00000415143 FKBP5Q13451 457 aaPredicted RBP16.74■□□□□ 0.27
SSR4P1-201ENST00000415143 NBR1Q14596 966 aa16.74■□□□□ 0.27
SSR4P1-201ENST00000415143 HDGFL1Q5TGJ6 251 aa16.74■□□□□ 0.27
SSR4P1-201ENST00000415143 CEP85Q6P2H3 762 aa16.74■□□□□ 0.27
SSR4P1-201ENST00000415143 SLC4A10Q6U841 1118 aa16.74■□□□□ 0.27
SSR4P1-201ENST00000415143 SIRT2Q8IXJ6 389 aa16.74■□□□□ 0.27
SSR4P1-201ENST00000415143 USHBP1Q8N6Y0 703 aa16.74■□□□□ 0.27
SSR4P1-201ENST00000415143 PXDNLA1KZ92 1463 aa16.73■□□□□ 0.27
SSR4P1-201ENST00000415143 SEC24BO95487 1268 aa16.73■□□□□ 0.27
SSR4P1-201ENST00000415143 CASC1Q6TDU7 716 aa16.73■□□□□ 0.27
SSR4P1-201ENST00000415143 CACNA1FO60840 1977 aa16.73■□□□□ 0.27
SSR4P1-201ENST00000415143 MFAP1P55081 439 aaKnown RBP16.72■□□□□ 0.27
SSR4P1-201ENST00000415143 BTBD11A6QL63 1104 aa16.71■□□□□ 0.27
SSR4P1-201ENST00000415143 RNMTO43148 476 aaKnown RBP16.71■□□□□ 0.27
SSR4P1-201ENST00000415143 CDC45O75419 566 aa16.71■□□□□ 0.27
SSR4P1-201ENST00000415143 EIF4A1P60842 406 aaKnown RBP16.71■□□□□ 0.27
SSR4P1-201ENST00000415143 CASZ1Q86V15 1759 aa16.71■□□□□ 0.27
SSR4P1-201ENST00000415143 SPATA31A1Q5TZJ5 1347 aa16.7■□□□□ 0.26
SSR4P1-201ENST00000415143 ABCC6O95255 1503 aa16.7■□□□□ 0.26
SSR4P1-201ENST00000415143 LMO7Q8WWI1 1683 aa16.7■□□□□ 0.26
SSR4P1-201ENST00000415143 GIGYF1O75420 1035 aaPredicted RBP16.7■□□□□ 0.26
SSR4P1-201ENST00000415143 G2E3Q7L622 706 aa16.7■□□□□ 0.26
SSR4P1-201ENST00000415143 RAPGEF4Q8WZA2 1011 aa16.7■□□□□ 0.26
SSR4P1-201ENST00000415143 MEIS3Q99687 375 aa16.7■□□□□ 0.26
SSR4P1-201ENST00000415143 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.7■□□□□ 0.26
SSR4P1-201ENST00000415143 SPG7Q9UQ90 795 aa16.7■□□□□ 0.26
SSR4P1-201ENST00000415143 TATP17735 454 aaPredicted RBP16.69■□□□□ 0.26
SSR4P1-201ENST00000415143 ATP10DQ9P241 1426 aa16.69■□□□□ 0.26
SSR4P1-201ENST00000415143 RBM25P49756 843 aaKnown RBP16.68■□□□□ 0.26
SSR4P1-201ENST00000415143 ZBTB7AO95365 584 aa16.67■□□□□ 0.26
SSR4P1-201ENST00000415143 HSP90AB1P08238 724 aaKnown RBP16.67■□□□□ 0.26
SSR4P1-201ENST00000415143 ATP8B2P98198 1209 aa16.67■□□□□ 0.26
SSR4P1-201ENST00000415143 PLEKHM2Q8IWE5 1019 aa16.67■□□□□ 0.26
SSR4P1-201ENST00000415143 SRCIN1Q9C0H9 1055 aa16.67■□□□□ 0.26
SSR4P1-201ENST00000415143 PRDM11Q9NQV5 511 aa16.67■□□□□ 0.26
SSR4P1-201ENST00000415143 DBF4Q9UBU7 674 aaPredicted RBP16.67■□□□□ 0.26
SSR4P1-201ENST00000415143 F6X3S4 739 aa16.66■□□□□ 0.26
SSR4P1-201ENST00000415143 UBTFL1P0CB47 393 aaPredicted RBP16.66■□□□□ 0.26
SSR4P1-201ENST00000415143 SLC4A3P48751 1232 aa16.66■□□□□ 0.26
SSR4P1-201ENST00000415143 TTC22Q5TAA0 569 aa16.66■□□□□ 0.26
SSR4P1-201ENST00000415143 HSCBQ8IWL3 235 aa16.66■□□□□ 0.26
SSR4P1-201ENST00000415143 PDGFDQ9GZP0 370 aaPredicted RBP16.66■□□□□ 0.26
SSR4P1-201ENST00000415143 LGR6Q9HBX8 967 aa16.66■□□□□ 0.26
SSR4P1-201ENST00000415143 STRN4Q9NRL3 753 aa16.66■□□□□ 0.26
SSR4P1-201ENST00000415143 ERBB3P21860 1342 aa16.66■□□□□ 0.26
SSR4P1-201ENST00000415143 FAM208AQ9UK61 1670 aaKnown RBP16.65■□□□□ 0.26
SSR4P1-201ENST00000415143 CSB-PGBD3P0DP91 1061 aa16.65■□□□□ 0.26
SSR4P1-201ENST00000415143 SYT17Q9BSW7 474 aa16.65■□□□□ 0.26
SSR4P1-201ENST00000415143 FHDC1Q9C0D6 1143 aaPredicted RBP16.65■□□□□ 0.26
SSR4P1-201ENST00000415143 ANO8Q9HCE9 1232 aaPredicted RBP16.65■□□□□ 0.26
SSR4P1-201ENST00000415143 RAB11FIP3O75154 756 aa16.64■□□□□ 0.25
SSR4P1-201ENST00000415143 EIF2S2P20042 333 aaKnown RBP16.64■□□□□ 0.25
SSR4P1-201ENST00000415143 PTGER2P43116 358 aa16.64■□□□□ 0.25
SSR4P1-201ENST00000415143 ZC3H6P61129 1189 aaKnown RBP16.64■□□□□ 0.25
SSR4P1-201ENST00000415143 HSP90AB4PQ58FF6 505 aa16.64■□□□□ 0.25
SSR4P1-201ENST00000415143 MPRIPQ6WCQ1 1025 aa16.64■□□□□ 0.25
SSR4P1-201ENST00000415143 NLRP2Q9NX02 1062 aa16.64■□□□□ 0.25
SSR4P1-201ENST00000415143 ATF5Q9Y2D1 282 aaPredicted RBP16.64■□□□□ 0.25
SSR4P1-201ENST00000415143 DDX58O95786 925 aaKnown RBP16.63■□□□□ 0.25
SSR4P1-201ENST00000415143 NECTIN2Q92692 538 aa16.63■□□□□ 0.25
SSR4P1-201ENST00000415143 SNX21Q969T3 373 aa16.63■□□□□ 0.25
SSR4P1-201ENST00000415143 LRRCC1Q9C099 1032 aa16.63■□□□□ 0.25
SSR4P1-201ENST00000415143 OSBPL3Q9H4L5 887 aa16.63■□□□□ 0.25
SSR4P1-201ENST00000415143 HYPKQ9NX55 129 aa16.63■□□□□ 0.25
SSR4P1-201ENST00000415143 KDM3BQ7LBC6 1761 aa16.62■□□□□ 0.25
SSR4P1-201ENST00000415143 ALDH1L1O75891 902 aa16.62■□□□□ 0.25
SSR4P1-201ENST00000415143 TBC1D9Q6ZT07 1266 aa16.62■□□□□ 0.25
SSR4P1-201ENST00000415143 IFNL2Q8IZJ0 200 aa16.62■□□□□ 0.25
SSR4P1-201ENST00000415143 DNAAF4Q8WXU2 420 aa16.62■□□□□ 0.25
SSR4P1-201ENST00000415143 CPDO75976 1380 aa16.62■□□□□ 0.25
SSR4P1-201ENST00000415143 RGPD3A6NKT7 1758 aaPredicted RBP16.61■□□□□ 0.25
SSR4P1-201ENST00000415143 RGPD4Q7Z3J3 1758 aa16.61■□□□□ 0.25
SSR4P1-201ENST00000415143 NFKBIBQ15653 356 aa16.61■□□□□ 0.25
SSR4P1-201ENST00000415143 CHRNA2Q15822 529 aa16.61■□□□□ 0.25
SSR4P1-201ENST00000415143 TBC1D2Q9BYX2 928 aa16.61■□□□□ 0.25
SSR4P1-201ENST00000415143 AXIN2Q9Y2T1 843 aa16.61■□□□□ 0.25
SSR4P1-201ENST00000415143 N4BP2Q86UW6 1770 aaPredicted RBP16.6■□□□□ 0.25
SSR4P1-201ENST00000415143 REC8O95072 547 aa16.59■□□□□ 0.25
SSR4P1-201ENST00000415143 BARGINQ6ZT62 677 aa16.59■□□□□ 0.25
SSR4P1-201ENST00000415143 IL27Q8NEV9 243 aa16.59■□□□□ 0.25
SSR4P1-201ENST00000415143 USP44Q9H0E7 712 aa16.59■□□□□ 0.25
SSR4P1-201ENST00000415143 CHPF2Q9P2E5 772 aa16.59■□□□□ 0.25
SSR4P1-201ENST00000415143 AOX1Q06278 1338 aa16.59■□□□□ 0.25
SSR4P1-201ENST00000415143 KSR2Q6VAB6 950 aa16.58■□□□□ 0.24
SSR4P1-201ENST00000415143 DCAF5Q96JK2 942 aa16.58■□□□□ 0.24
SSR4P1-201ENST00000415143 BCL11BQ9C0K0 894 aaPredicted RBP16.58■□□□□ 0.24
SSR4P1-201ENST00000415143 PHAXQ9H814 394 aaKnown RBP16.58■□□□□ 0.24
SSR4P1-201ENST00000415143 LRRFIP2Q9Y608 721 aaKnown RBP16.58■□□□□ 0.24
SSR4P1-201ENST00000415143 HEG1Q9ULI3 1381 aa16.58■□□□□ 0.24
SSR4P1-201ENST00000415143 COL18A1P39060 1754 aa16.58■□□□□ 0.24
SSR4P1-201ENST00000415143 SBF2Q86WG5 1849 aa16.57■□□□□ 0.24
SSR4P1-201ENST00000415143 RGPD2P0DJD1 1756 aa16.57■□□□□ 0.24
SSR4P1-201ENST00000415143 SSH3Q8TE77 659 aa16.57■□□□□ 0.24
SSR4P1-201ENST00000415143 SLC52A2Q9HAB3 445 aa16.57■□□□□ 0.24
SSR4P1-201ENST00000415143 CHMP5Q9NZZ3 219 aa16.57■□□□□ 0.24
SSR4P1-201ENST00000415143 IBTKQ9P2D0 1353 aaPredicted RBP16.56■□□□□ 0.24
SSR4P1-201ENST00000415143 PI4KAP2A4QPH2 592 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms