RNA–Protein interactions for RNA: ENST00000413787.1

SLC6A8-202, Transcript of solute carrier family 6 member 8, humanhuman

TSL 5

Gene SLC6A8, Length 468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-202ENST00000413787 TEX13AQ9BXU3 409 aaPredicted RBP23.81■■□□□ 1.4
SLC6A8-202ENST00000413787 CHD4Q14839 1912 aa23.8■■□□□ 1.4
SLC6A8-202ENST00000413787 UTRNP46939 3433 aa23.79■■□□□ 1.4
SLC6A8-202ENST00000413787 COL15A1P39059 1388 aa23.78■■□□□ 1.4
SLC6A8-202ENST00000413787 GOLGB1Q14789 3259 aaKnown RBP23.78■■□□□ 1.4
SLC6A8-202ENST00000413787 YY1P25490 414 aa23.78■■□□□ 1.4
SLC6A8-202ENST00000413787 PELP1Q8IZL8 1130 aaKnown RBP23.78■■□□□ 1.4
SLC6A8-202ENST00000413787 ZPR1O75312 459 aa23.77■■□□□ 1.4
SLC6A8-202ENST00000413787 CANXP27824 592 aaKnown RBP23.77■■□□□ 1.4
SLC6A8-202ENST00000413787 FKBP8Q14318 412 aa23.77■■□□□ 1.4
SLC6A8-202ENST00000413787 TAF7Q15545 349 aaPredicted RBP23.77■■□□□ 1.4
SLC6A8-202ENST00000413787 KIF13BQ9NQT8 1826 aa23.77■■□□□ 1.4
SLC6A8-202ENST00000413787 EIF5P55010 431 aaKnown RBP23.75■■□□□ 1.39
SLC6A8-202ENST00000413787 USPL1Q5W0Q7 1092 aa23.75■■□□□ 1.39
SLC6A8-202ENST00000413787 NARFQ9UHQ1 456 aa23.75■■□□□ 1.39
SLC6A8-202ENST00000413787 PARP3Q9Y6F1 533 aa23.75■■□□□ 1.39
SLC6A8-202ENST00000413787 YBX3P16989 372 aaKnown RBP eCLIP23.74■■□□□ 1.391e-28■■■□□ 15
SLC6A8-202ENST00000413787 THUMPD2Q9BTF0 503 aaKnown RBP23.74■■□□□ 1.39
SLC6A8-202ENST00000413787 WDR43Q15061 677 aaKnown RBP eCLIP23.73■■□□□ 1.39
SLC6A8-202ENST00000413787 MIS18AQ9NYP9 233 aa23.73■■□□□ 1.39
SLC6A8-202ENST00000413787 C10orf71Q711Q0 1435 aa23.73■■□□□ 1.39
SLC6A8-202ENST00000413787 A1BGP04217 495 aa23.72■■□□□ 1.39
SLC6A8-202ENST00000413787 SNRPA1P09661 255 aaKnown RBP23.72■■□□□ 1.39
SLC6A8-202ENST00000413787 DDR1Q08345 913 aa23.72■■□□□ 1.39
SLC6A8-202ENST00000413787 USP16Q9Y5T5 823 aa23.72■■□□□ 1.39
SLC6A8-202ENST00000413787 KDM3BQ7LBC6 1761 aa23.72■■□□□ 1.39
SLC6A8-202ENST00000413787 PRAMEF22A3QJZ6 481 aa23.71■■□□□ 1.39
SLC6A8-202ENST00000413787 ZNF316A6NFI3 1004 aaPredicted RBP23.71■■□□□ 1.39
SLC6A8-202ENST00000413787 TM4SF1P30408 202 aa23.71■■□□□ 1.39
SLC6A8-202ENST00000413787 IL6STP40189 918 aaPredicted RBP23.71■■□□□ 1.39
SLC6A8-202ENST00000413787 RIPK4P57078 832 aa23.71■■□□□ 1.39
SLC6A8-202ENST00000413787 PNISRQ8TF01 805 aaKnown RBP23.71■■□□□ 1.39
SLC6A8-202ENST00000413787 KIAA1551Q9HCM1 1747 aa23.7■■□□□ 1.39
SLC6A8-202ENST00000413787 A0A087WZG4 1122 aa23.7■■□□□ 1.38
SLC6A8-202ENST00000413787 GRIN3BO60391 1043 aa23.7■■□□□ 1.38
SLC6A8-202ENST00000413787 TMPOP42166 694 aaKnown RBP23.7■■□□□ 1.38
SLC6A8-202ENST00000413787 CCDC146Q8IYE0 955 aa23.7■■□□□ 1.38
SLC6A8-202ENST00000413787 BCL2L12Q9HB09 334 aa23.7■■□□□ 1.38
SLC6A8-202ENST00000413787 PXDNLA1KZ92 1463 aa23.69■■□□□ 1.38
SLC6A8-202ENST00000413787 ADAMTS8Q9UP79 889 aa23.69■■□□□ 1.38
SLC6A8-202ENST00000413787 ZNF330Q9Y3S2 320 aaPredicted RBP23.69■■□□□ 1.38
SLC6A8-202ENST00000413787 N4BP2Q86UW6 1770 aaPredicted RBP23.69■■□□□ 1.38
SLC6A8-202ENST00000413787 POLRMTO00411 1230 aaKnown RBP23.68■■□□□ 1.38
SLC6A8-202ENST00000413787 TGFB2P61812 414 aa23.68■■□□□ 1.38
SLC6A8-202ENST00000413787 NFIXQ14938 502 aa23.67■■□□□ 1.38
SLC6A8-202ENST00000413787 RUNDC1Q96C34 613 aa23.67■■□□□ 1.38
SLC6A8-202ENST00000413787 WWC3Q9ULE0 1092 aa23.67■■□□□ 1.38
SLC6A8-202ENST00000413787 AFDNP55196 1824 aaKnown RBP23.66■■□□□ 1.38
SLC6A8-202ENST00000413787 LMOD3Q0VAK6 560 aa23.66■■□□□ 1.38
SLC6A8-202ENST00000413787 TBC1D2BQ9UPU7 963 aa23.66■■□□□ 1.38
SLC6A8-202ENST00000413787 RRP7AQ9Y3A4 280 aaKnown RBP23.66■■□□□ 1.38
SLC6A8-202ENST00000413787 SCN7AQ01118 1682 aa23.66■■□□□ 1.38
SLC6A8-202ENST00000413787 LAMB4A4D0S4 1761 aa23.65■■□□□ 1.38
SLC6A8-202ENST00000413787 PIP4K2AP48426 406 aaPredicted RBP23.65■■□□□ 1.38
SLC6A8-202ENST00000413787 NPM2Q86SE8 214 aaKnown RBP23.65■■□□□ 1.38
SLC6A8-202ENST00000413787 A0A0G2JLW4 131 aa23.64■■□□□ 1.37
SLC6A8-202ENST00000413787 EIF4A1P60842 406 aaKnown RBP23.64■■□□□ 1.37
SLC6A8-202ENST00000413787 GIGYF1O75420 1035 aaPredicted RBP23.63■■□□□ 1.37
SLC6A8-202ENST00000413787 BRCA1P38398 1863 aaKnown RBP23.63■■□□□ 1.37
SLC6A8-202ENST00000413787 NEUROD2Q15784 382 aa23.63■■□□□ 1.37
SLC6A8-202ENST00000413787 NRXN2Q9P2S2 1712 aa23.62■■□□□ 1.37
SLC6A8-202ENST00000413787 NBPF26B4DH59 902 aa23.62■■□□□ 1.37
SLC6A8-202ENST00000413787 DPEP1P16444 411 aa23.62■■□□□ 1.37
SLC6A8-202ENST00000413787 NBPF10Q6P3W6 841 aaKnown RBP23.62■■□□□ 1.37
SLC6A8-202ENST00000413787 NBPF15Q8N660 670 aa23.62■■□□□ 1.37
SLC6A8-202ENST00000413787 BCORQ6W2J9 1755 aa23.61■■□□□ 1.37
SLC6A8-202ENST00000413787 CAMTA2O94983 1202 aa23.61■■□□□ 1.37
SLC6A8-202ENST00000413787 BICDL1Q6ZP65 573 aa23.61■■□□□ 1.37
SLC6A8-202ENST00000413787 DZIP3Q86Y13 1208 aaKnown RBP23.61■■□□□ 1.37
SLC6A8-202ENST00000413787 TSPYL4Q9UJ04 414 aa23.61■■□□□ 1.37
SLC6A8-202ENST00000413787 SERPINB2P05120 415 aa23.6■■□□□ 1.37
SLC6A8-202ENST00000413787 TBC1D9BQ66K14 1250 aa23.6■■□□□ 1.37
SLC6A8-202ENST00000413787 KCNA3P22001 575 aa23.59■■□□□ 1.37
SLC6A8-202ENST00000413787 BABAM1Q9NWV8 329 aa23.59■■□□□ 1.37
SLC6A8-202ENST00000413787 TRIM35Q9UPQ4 493 aa23.59■■□□□ 1.37
SLC6A8-202ENST00000413787 CCDC184Q52MB2 194 aa23.57■■□□□ 1.36
SLC6A8-202ENST00000413787 ZNF784Q8NCA9 323 aaPredicted RBP23.57■■□□□ 1.36
SLC6A8-202ENST00000413787 BCS1LQ9Y276 419 aa23.57■■□□□ 1.36
SLC6A8-202ENST00000413787 CHRNA5P30532 468 aa23.55■■□□□ 1.36
SLC6A8-202ENST00000413787 CARMIL3Q8ND23 1372 aa23.54■■□□□ 1.36
SLC6A8-202ENST00000413787 CLEC4GQ6UXB4 293 aa23.54■■□□□ 1.36
SLC6A8-202ENST00000413787 PIM2Q9P1W9 311 aa23.54■■□□□ 1.36
SLC6A8-202ENST00000413787 ARFGEF1Q9Y6D6 1849 aa23.54■■□□□ 1.36
SLC6A8-202ENST00000413787 CHL1O00533 1208 aa23.53■■□□□ 1.36
SLC6A8-202ENST00000413787 APAF1O14727 1248 aa23.53■■□□□ 1.36
SLC6A8-202ENST00000413787 ANP32CO43423 234 aa23.53■■□□□ 1.36
SLC6A8-202ENST00000413787 SETDB2Q96T68 719 aa23.53■■□□□ 1.36
SLC6A8-202ENST00000413787 RGL2O15211 777 aa23.52■■□□□ 1.36
SLC6A8-202ENST00000413787 ZNF652Q9Y2D9 606 aa23.52■■□□□ 1.36
SLC6A8-202ENST00000413787 ANKRD31Q8N7Z5 1873 aa23.51■■□□□ 1.35
SLC6A8-202ENST00000413787 DLEC1Q9Y238 1755 aa23.5■■□□□ 1.35
SLC6A8-202ENST00000413787 DALRD3Q5D0E6 543 aaKnown RBP23.5■■□□□ 1.35
SLC6A8-202ENST00000413787 PRR5LQ6MZQ0 368 aa23.5■■□□□ 1.35
SLC6A8-202ENST00000413787 NGEFQ8N5V2 710 aa23.5■■□□□ 1.35
SLC6A8-202ENST00000413787 LAS1LQ9Y4W2 734 aaKnown RBP23.5■■□□□ 1.35
SLC6A8-202ENST00000413787 ERBB4Q15303 1308 aa23.5■■□□□ 1.35
SLC6A8-202ENST00000413787 NUP98P52948 1817 aa23.48■■□□□ 1.35
SLC6A8-202ENST00000413787 MYL6BP14649 208 aa23.48■■□□□ 1.35
SLC6A8-202ENST00000413787 CNBD1Q8NA66 436 aa23.48■■□□□ 1.35
SLC6A8-202ENST00000413787 BRIP1Q9BX63 1249 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms