RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 ZNF316A6NFI3 1004 aaPredicted RBP23.09■■□□□ 1.29
HSPG2-204ENST00000412328 TTC5Q8N0Z6 440 aa23.09■■□□□ 1.29
HSPG2-204ENST00000412328 BTBD11A6QL63 1104 aa23.08■■□□□ 1.29
HSPG2-204ENST00000412328 ANKRD31Q8N7Z5 1873 aa23.08■■□□□ 1.29
HSPG2-204ENST00000412328 RTF1Q92541 710 aaKnown RBP23.07■■□□□ 1.28
HSPG2-204ENST00000412328 ARFGEF1Q9Y6D6 1849 aa23.06■■□□□ 1.28
HSPG2-204ENST00000412328 SRP68Q9UHB9 627 aaKnown RBP23.06■■□□□ 1.28
HSPG2-204ENST00000412328 MAPK8IP3Q9UPT6 1336 aa23.06■■□□□ 1.28
HSPG2-204ENST00000412328 PXDNLA1KZ92 1463 aa23.05■■□□□ 1.28
HSPG2-204ENST00000412328 FMNL2Q96PY5 1086 aa23.05■■□□□ 1.28
HSPG2-204ENST00000412328 MMP10P09238 476 aa23.04■■□□□ 1.28
HSPG2-204ENST00000412328 THUMPD2Q9BTF0 503 aaKnown RBP23.04■■□□□ 1.28
HSPG2-204ENST00000412328 PRAMEF22A3QJZ6 481 aa23.03■■□□□ 1.28
HSPG2-204ENST00000412328 RFC4P35249 363 aa23.03■■□□□ 1.28
HSPG2-204ENST00000412328 PNNQ9H307 717 aaKnown RBP23.03■■□□□ 1.28
HSPG2-204ENST00000412328 CD2APQ9Y5K6 639 aa23.03■■□□□ 1.28
HSPG2-204ENST00000412328 COL11A2P13942 1736 aaPredicted RBP23.02■■□□□ 1.28
HSPG2-204ENST00000412328 EIF5P55010 431 aaKnown RBP23.02■■□□□ 1.28
HSPG2-204ENST00000412328 NUP98P52948 1817 aa23.02■■□□□ 1.28
HSPG2-204ENST00000412328 NEFMP07197 916 aa23.01■■□□□ 1.27
HSPG2-204ENST00000412328 TMPOP42166 694 aaKnown RBP23.01■■□□□ 1.27
HSPG2-204ENST00000412328 DDR1Q08345 913 aa23.01■■□□□ 1.27
HSPG2-204ENST00000412328 FKBP8Q14318 412 aa23.01■■□□□ 1.27
HSPG2-204ENST00000412328 KLHL34Q8N239 644 aa23.01■■□□□ 1.27
HSPG2-204ENST00000412328 NLGN1Q8N2Q7 840 aa23.01■■□□□ 1.27
HSPG2-204ENST00000412328 BCL2L12Q9HB09 334 aa23.01■■□□□ 1.27
HSPG2-204ENST00000412328 ADAMTS8Q9UP79 889 aa23.01■■□□□ 1.27
HSPG2-204ENST00000412328 TAF7Q15545 349 aaPredicted RBP23■■□□□ 1.27
HSPG2-204ENST00000412328 CCDC184Q52MB2 194 aa23■■□□□ 1.27
HSPG2-204ENST00000412328 CCDC146Q8IYE0 955 aa23■■□□□ 1.27
HSPG2-204ENST00000412328 TEX13AQ9BXU3 409 aaPredicted RBP22.99■■□□□ 1.27
HSPG2-204ENST00000412328 NARFQ9UHQ1 456 aa22.99■■□□□ 1.27
HSPG2-204ENST00000412328 STARD3NLO95772 234 aa22.98■■□□□ 1.27
HSPG2-204ENST00000412328 USPL1Q5W0Q7 1092 aa22.98■■□□□ 1.27
HSPG2-204ENST00000412328 RUNDC1Q96C34 613 aa22.98■■□□□ 1.27
HSPG2-204ENST00000412328 MIS18AQ9NYP9 233 aa22.98■■□□□ 1.27
HSPG2-204ENST00000412328 USP16Q9Y5T5 823 aa22.98■■□□□ 1.27
HSPG2-204ENST00000412328 ANKRD36CQ5JPF3 1778 aa22.97■■□□□ 1.27
HSPG2-204ENST00000412328 CANXP27824 592 aaKnown RBP22.97■■□□□ 1.27
HSPG2-204ENST00000412328 WDR43Q15061 677 aaKnown RBP eCLIP22.97■■□□□ 1.27
HSPG2-204ENST00000412328 YBX3P16989 372 aaKnown RBP eCLIP22.96■■□□□ 1.27
HSPG2-204ENST00000412328 TM4SF1P30408 202 aa22.96■■□□□ 1.27
HSPG2-204ENST00000412328 IL6STP40189 918 aaPredicted RBP22.96■■□□□ 1.27
HSPG2-204ENST00000412328 RIPK4P57078 832 aa22.96■■□□□ 1.27
HSPG2-204ENST00000412328 TRIM35Q9UPQ4 493 aa22.96■■□□□ 1.27
HSPG2-204ENST00000412328 ARFGEF2Q9Y6D5 1785 aa22.96■■□□□ 1.27
HSPG2-204ENST00000412328 POLRMTO00411 1230 aaKnown RBP22.95■■□□□ 1.26
HSPG2-204ENST00000412328 A1BGP04217 495 aa22.95■■□□□ 1.26
HSPG2-204ENST00000412328 SNRPA1P09661 255 aaKnown RBP22.95■■□□□ 1.26
HSPG2-204ENST00000412328 RRP7AQ9Y3A4 280 aaKnown RBP22.95■■□□□ 1.26
HSPG2-204ENST00000412328 EIF4A1P60842 406 aaKnown RBP22.94■■□□□ 1.26
HSPG2-204ENST00000412328 PNISRQ8TF01 805 aaKnown RBP22.94■■□□□ 1.26
HSPG2-204ENST00000412328 CACNA1SQ13698 1873 aa22.94■■□□□ 1.26
HSPG2-204ENST00000412328 NBPF26B4DH59 902 aa22.93■■□□□ 1.26
HSPG2-204ENST00000412328 NBPF10Q6P3W6 841 aaKnown RBP22.93■■□□□ 1.26
HSPG2-204ENST00000412328 NBPF15Q8N660 670 aa22.93■■□□□ 1.26
HSPG2-204ENST00000412328 CARMIL3Q8ND23 1372 aa22.91■■□□□ 1.26
HSPG2-204ENST00000412328 ZPR1O75312 459 aa22.91■■□□□ 1.26
HSPG2-204ENST00000412328 GIGYF1O75420 1035 aaPredicted RBP22.91■■□□□ 1.26
HSPG2-204ENST00000412328 PIP4K2AP48426 406 aaPredicted RBP22.91■■□□□ 1.26
HSPG2-204ENST00000412328 LMOD3Q0VAK6 560 aa22.91■■□□□ 1.26
HSPG2-204ENST00000412328 NFIXQ14938 502 aa22.91■■□□□ 1.26
HSPG2-204ENST00000412328 CAMTA2O94983 1202 aa22.9■■□□□ 1.26
HSPG2-204ENST00000412328 BABAM1Q9NWV8 329 aa22.89■■□□□ 1.25
HSPG2-204ENST00000412328 PARP3Q9Y6F1 533 aa22.89■■□□□ 1.25
HSPG2-204ENST00000412328 TNRC6CQ9HCJ0 1690 aaKnown RBP22.89■■□□□ 1.25
HSPG2-204ENST00000412328 A0A087WZG4 1122 aa22.88■■□□□ 1.25
HSPG2-204ENST00000412328 SBF1O95248 1867 aa22.88■■□□□ 1.25
HSPG2-204ENST00000412328 DCAF8L1A6NGE4 600 aa22.87■■□□□ 1.25
HSPG2-204ENST00000412328 GPR162Q16538 588 aa22.87■■□□□ 1.25
HSPG2-204ENST00000412328 TBC1D2BQ9UPU7 963 aa22.87■■□□□ 1.25
HSPG2-204ENST00000412328 TSPYL4Q9UJ04 414 aa22.86■■□□□ 1.25
HSPG2-204ENST00000412328 KCNA3P22001 575 aa22.85■■□□□ 1.25
HSPG2-204ENST00000412328 TGFB2P61812 414 aa22.85■■□□□ 1.25
HSPG2-204ENST00000412328 NEUROD2Q15784 382 aa22.85■■□□□ 1.25
HSPG2-204ENST00000412328 TBC1D9BQ66K14 1250 aa22.85■■□□□ 1.25
HSPG2-204ENST00000412328 CHL1O00533 1208 aa22.84■■□□□ 1.25
HSPG2-204ENST00000412328 LRP10Q7Z4F1 713 aa22.84■■□□□ 1.25
HSPG2-204ENST00000412328 DZIP3Q86Y13 1208 aaKnown RBP22.84■■□□□ 1.25
HSPG2-204ENST00000412328 ZNF330Q9Y3S2 320 aaPredicted RBP22.84■■□□□ 1.25
HSPG2-204ENST00000412328 APAF1O14727 1248 aa22.83■■□□□ 1.25
HSPG2-204ENST00000412328 YY1P25490 414 aa22.83■■□□□ 1.25
HSPG2-204ENST00000412328 RGL2O15211 777 aa22.82■■□□□ 1.24
HSPG2-204ENST00000412328 DPEP1P16444 411 aa22.82■■□□□ 1.24
HSPG2-204ENST00000412328 PELP1Q8IZL8 1130 aaKnown RBP22.82■■□□□ 1.24
HSPG2-204ENST00000412328 ERBB4Q15303 1308 aa22.82■■□□□ 1.24
HSPG2-204ENST00000412328 LAMB2P55268 1798 aa22.81■■□□□ 1.24
HSPG2-204ENST00000412328 ADCY9O60503 1353 aa22.81■■□□□ 1.24
HSPG2-204ENST00000412328 A0A0G2JLW4 131 aa22.81■■□□□ 1.24
HSPG2-204ENST00000412328 ANP32CO43423 234 aa22.81■■□□□ 1.24
HSPG2-204ENST00000412328 SERPINB2P05120 415 aa22.81■■□□□ 1.24
HSPG2-204ENST00000412328 ZNF853P0CG23 659 aa22.81■■□□□ 1.24
HSPG2-204ENST00000412328 CCDC88AQ3V6T2 1871 aa22.81■■□□□ 1.24
HSPG2-204ENST00000412328 FER1L6Q2WGJ9 1857 aa22.8■■□□□ 1.24
HSPG2-204ENST00000412328 PDIA6Q15084 440 aa22.8■■□□□ 1.24
HSPG2-204ENST00000412328 KRT24Q2M2I5 525 aa22.8■■□□□ 1.24
HSPG2-204ENST00000412328 WWC3Q9ULE0 1092 aa22.8■■□□□ 1.24
HSPG2-204ENST00000412328 ATP10DQ9P241 1426 aa22.8■■□□□ 1.24
HSPG2-204ENST00000412328 MRS2Q9HD23 443 aa22.79■■□□□ 1.24
HSPG2-204ENST00000412328 SLX4Q8IY92 1834 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms