RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 NPM2Q86SE8 214 aaKnown RBP21.34■■□□□ 1.01
DDR1-230ENST00000412274 KLHL34Q8N239 644 aa21.34■■□□□ 1.01
DDR1-230ENST00000412274 DLG5Q8TDM6 1919 aa21.33■■□□□ 1.01
DDR1-230ENST00000412274 SNRPA1P09661 255 aaKnown RBP21.33■■□□□ 1.01
DDR1-230ENST00000412274 RIPK4P57078 832 aa21.33■■□□□ 1.01
DDR1-230ENST00000412274 BABAM1Q9NWV8 329 aa21.33■■□□□ 1.01
DDR1-230ENST00000412274 MMP10P09238 476 aa21.32■■□□□ 1
DDR1-230ENST00000412274 TMPOP42166 694 aaKnown RBP21.32■■□□□ 1
DDR1-230ENST00000412274 ZBTB1Q9Y2K1 713 aa21.32■■□□□ 1
DDR1-230ENST00000412274 IL6STP40189 918 aaPredicted RBP21.31■■□□□ 1
DDR1-230ENST00000412274 NARFQ9UHQ1 456 aa21.31■■□□□ 1
DDR1-230ENST00000412274 PARP3Q9Y6F1 533 aa21.31■■□□□ 1
DDR1-230ENST00000412274 C4AP0C0L4 1744 aa21.31■■□□□ 1
DDR1-230ENST00000412274 COL15A1P39059 1388 aa21.31■■□□□ 1
DDR1-230ENST00000412274 ANP32CO43423 234 aa21.3■■□□□ 1
DDR1-230ENST00000412274 EIF5P55010 431 aaKnown RBP21.3■■□□□ 1
DDR1-230ENST00000412274 ADAMTS8Q9UP79 889 aa21.3■■□□□ 1
DDR1-230ENST00000412274 CANXP27824 592 aaKnown RBP21.29■■□□□ 1
DDR1-230ENST00000412274 KCNQ3O43525 872 aa21.28■■□□□ 1
DDR1-230ENST00000412274 GPR162Q16538 588 aa21.28■■□□□ 1
DDR1-230ENST00000412274 TGFB2P61812 414 aa21.27■■□□□ 1
DDR1-230ENST00000412274 USPL1Q5W0Q7 1092 aa21.26■□□□□ 0.99
DDR1-230ENST00000412274 NLGN2Q8NFZ4 835 aa21.26■□□□□ 0.99
DDR1-230ENST00000412274 SRP68Q9UHB9 627 aaKnown RBP21.26■□□□□ 0.99
DDR1-230ENST00000412274 USP16Q9Y5T5 823 aa21.26■□□□□ 0.99
DDR1-230ENST00000412274 GRIN3BO60391 1043 aa21.25■□□□□ 0.99
DDR1-230ENST00000412274 TM4SF1P30408 202 aa21.25■□□□□ 0.99
DDR1-230ENST00000412274 FKBP8Q14318 412 aa21.25■□□□□ 0.99
DDR1-230ENST00000412274 KDM3BQ7LBC6 1761 aa21.24■□□□□ 0.99
DDR1-230ENST00000412274 RGL2O15211 777 aa21.24■□□□□ 0.99
DDR1-230ENST00000412274 CCDC146Q8IYE0 955 aa21.24■□□□□ 0.99
DDR1-230ENST00000412274 A1BGP04217 495 aa21.23■□□□□ 0.99
DDR1-230ENST00000412274 EIF4A1P60842 406 aaKnown RBP21.23■□□□□ 0.99
DDR1-230ENST00000412274 MIS18AQ9NYP9 233 aa21.23■□□□□ 0.99
DDR1-230ENST00000412274 TSPYL4Q9UJ04 414 aa21.23■□□□□ 0.99
DDR1-230ENST00000412274 GIGYF1O75420 1035 aaPredicted RBP21.22■□□□□ 0.99
DDR1-230ENST00000412274 THUMPD2Q9BTF0 503 aaKnown RBP21.22■□□□□ 0.99
DDR1-230ENST00000412274 KIF13BQ9NQT8 1826 aa21.21■□□□□ 0.99
DDR1-230ENST00000412274 CALD1Q05682 793 aaKnown RBP21.21■□□□□ 0.99
DDR1-230ENST00000412274 NEUROD2Q15784 382 aa21.21■□□□□ 0.99
DDR1-230ENST00000412274 C10orf71Q711Q0 1435 aa21.21■□□□□ 0.99
DDR1-230ENST00000412274 CLEC4GQ6UXB4 293 aa21.2■□□□□ 0.98
DDR1-230ENST00000412274 POLRMTO00411 1230 aaKnown RBP21.19■□□□□ 0.98
DDR1-230ENST00000412274 YY1P25490 414 aa21.19■□□□□ 0.98
DDR1-230ENST00000412274 PELP1Q8IZL8 1130 aaKnown RBP21.19■□□□□ 0.98
DDR1-230ENST00000412274 TRIM35Q9UPQ4 493 aa21.19■□□□□ 0.98
DDR1-230ENST00000412274 ZNF652Q9Y2D9 606 aa21.19■□□□□ 0.98
DDR1-230ENST00000412274 RRP7AQ9Y3A4 280 aaKnown RBP21.19■□□□□ 0.98
DDR1-230ENST00000412274 ZNF330Q9Y3S2 320 aaPredicted RBP21.19■□□□□ 0.98
DDR1-230ENST00000412274 ERBB4Q15303 1308 aa21.19■□□□□ 0.98
DDR1-230ENST00000412274 LAMB4A4D0S4 1761 aa21.18■□□□□ 0.98
DDR1-230ENST00000412274 NFIXQ14938 502 aa21.18■□□□□ 0.98
DDR1-230ENST00000412274 DZIP3Q86Y13 1208 aaKnown RBP21.18■□□□□ 0.98
DDR1-230ENST00000412274 BCL2L12Q9HB09 334 aa21.18■□□□□ 0.98
DDR1-230ENST00000412274 PRAMEF22A3QJZ6 481 aa21.17■□□□□ 0.98
DDR1-230ENST00000412274 CHL1O00533 1208 aa21.17■□□□□ 0.98
DDR1-230ENST00000412274 DDR1Q08345 913 aa21.17■□□□□ 0.98
DDR1-230ENST00000412274 TBC1D2BQ9UPU7 963 aa21.17■□□□□ 0.98
DDR1-230ENST00000412274 NCBP3Q53F19 620 aaKnown RBP21.16■□□□□ 0.98
DDR1-230ENST00000412274 SCN7AQ01118 1682 aa21.15■□□□□ 0.98
DDR1-230ENST00000412274 APAF1O14727 1248 aa21.15■□□□□ 0.98
DDR1-230ENST00000412274 CAMTA2O94983 1202 aa21.15■□□□□ 0.98
DDR1-230ENST00000412274 SERPINB2P05120 415 aa21.15■□□□□ 0.98
DDR1-230ENST00000412274 CFAP44Q96MT7 982 aa21.15■□□□□ 0.98
DDR1-230ENST00000412274 SETDB2Q96T68 719 aa21.15■□□□□ 0.98
DDR1-230ENST00000412274 MRS2Q9HD23 443 aa21.15■□□□□ 0.98
DDR1-230ENST00000412274 PDZRN3Q9UPQ7 1066 aa21.15■□□□□ 0.98
DDR1-230ENST00000412274 NBPF26B4DH59 902 aa21.14■□□□□ 0.97
DDR1-230ENST00000412274 NBPF10Q6P3W6 841 aaKnown RBP21.14■□□□□ 0.97
DDR1-230ENST00000412274 NBPF15Q8N660 670 aa21.14■□□□□ 0.97
DDR1-230ENST00000412274 CHD4Q14839 1912 aa21.14■□□□□ 0.97
DDR1-230ENST00000412274 PXDNLA1KZ92 1463 aa21.13■□□□□ 0.97
DDR1-230ENST00000412274 CARMIL3Q8ND23 1372 aa21.13■□□□□ 0.97
DDR1-230ENST00000412274 YBX3P16989 372 aaKnown RBP eCLIP21.13■□□□□ 0.97
DDR1-230ENST00000412274 NRXN2Q9P2S2 1712 aa21.12■□□□□ 0.97
DDR1-230ENST00000412274 HOXB7P09629 217 aa21.12■□□□□ 0.97
DDR1-230ENST00000412274 ERVV-1B6SEH8 477 aa21.11■□□□□ 0.97
DDR1-230ENST00000412274 GNAI1P63096 354 aa21.11■□□□□ 0.97
DDR1-230ENST00000412274 CCDC27Q2M243 656 aa21.11■□□□□ 0.97
DDR1-230ENST00000412274 TBC1D9BQ66K14 1250 aa21.11■□□□□ 0.97
DDR1-230ENST00000412274 CHMP4AQ9BY43 222 aa21.11■□□□□ 0.97
DDR1-230ENST00000412274 IFT57Q9NWB7 429 aa21.11■□□□□ 0.97
DDR1-230ENST00000412274 PIM2Q9P1W9 311 aa21.11■□□□□ 0.97
DDR1-230ENST00000412274 LAS1LQ9Y4W2 734 aaKnown RBP21.11■□□□□ 0.97
DDR1-230ENST00000412274 BCORQ6W2J9 1755 aa21.1■□□□□ 0.97
DDR1-230ENST00000412274 UTRNP46939 3433 aa21.1■□□□□ 0.97
DDR1-230ENST00000412274 A0A0G2JLW4 131 aa21.1■□□□□ 0.97
DDR1-230ENST00000412274 KIF6Q6ZMV9 814 aa21.1■□□□□ 0.97
DDR1-230ENST00000412274 DPEP1P16444 411 aa21.09■□□□□ 0.97
DDR1-230ENST00000412274 PIP4K2AP48426 406 aaPredicted RBP21.09■□□□□ 0.97
DDR1-230ENST00000412274 CCDC184Q52MB2 194 aa21.09■□□□□ 0.97
DDR1-230ENST00000412274 BICDL1Q6ZP65 573 aa21.09■□□□□ 0.97
DDR1-230ENST00000412274 KIAA1551Q9HCM1 1747 aa21.09■□□□□ 0.97
DDR1-230ENST00000412274 PDE6BP35913 854 aa21.08■□□□□ 0.97
DDR1-230ENST00000412274 BRIP1Q9BX63 1249 aa21.08■□□□□ 0.97
DDR1-230ENST00000412274 AFDNP55196 1824 aaKnown RBP21.08■□□□□ 0.96
DDR1-230ENST00000412274 ZNF853P0CG23 659 aa21.07■□□□□ 0.96
DDR1-230ENST00000412274 ST5P78524 1137 aa21.07■□□□□ 0.96
DDR1-230ENST00000412274 NGEFQ8N5V2 710 aa21.07■□□□□ 0.96
DDR1-230ENST00000412274 N4BP2Q86UW6 1770 aaPredicted RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms