RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 CD33P20138 364 aa6.24□□□□□ -1.41
HMGB3P2-201ENST00000411913 NIFKQ9BYG3 293 aaKnown RBP6.24□□□□□ -1.41
HMGB3P2-201ENST00000411913 DNAAF2Q9NVR5 837 aaKnown RBP6.24□□□□□ -1.41
HMGB3P2-201ENST00000411913 DOLKQ9UPQ8 538 aa6.24□□□□□ -1.41
HMGB3P2-201ENST00000411913 APBB1O00213 710 aa6.23□□□□□ -1.41
HMGB3P2-201ENST00000411913 MAPTP10636 758 aaKnown RBP6.23□□□□□ -1.41
HMGB3P2-201ENST00000411913 PCBP4P57723 403 aaKnown RBP6.23□□□□□ -1.41
HMGB3P2-201ENST00000411913 TNP2Q05952 138 aa6.23□□□□□ -1.41
HMGB3P2-201ENST00000411913 FAM182BQ5T319 152 aa6.23□□□□□ -1.41
HMGB3P2-201ENST00000411913 FCHSD1Q86WN1 690 aa6.23□□□□□ -1.41
HMGB3P2-201ENST00000411913 TRIM11Q96F44 468 aa6.23□□□□□ -1.41
HMGB3P2-201ENST00000411913 AVENQ9NQS1 362 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P2-201ENST00000411913 KLF15Q9UIH9 416 aa6.23□□□□□ -1.41
HMGB3P2-201ENST00000411913 GJA3Q9Y6H8 435 aa6.23□□□□□ -1.41
HMGB3P2-201ENST00000411913 A0A1W2PNR3 127 aa6.22□□□□□ -1.41
HMGB3P2-201ENST00000411913 SPDYE3A6NKU9 549 aa6.22□□□□□ -1.41
HMGB3P2-201ENST00000411913 NBPF1Q3BBV0 1214 aa6.22□□□□□ -1.41
HMGB3P2-201ENST00000411913 SLFNL1Q499Z3 407 aa6.22□□□□□ -1.41
HMGB3P2-201ENST00000411913 OXLD1Q5BKU9 147 aa6.22□□□□□ -1.41
HMGB3P2-201ENST00000411913 PRRT3Q5FWE3 981 aa6.22□□□□□ -1.41
HMGB3P2-201ENST00000411913 SIRT1Q96EB6 747 aa6.22□□□□□ -1.41
HMGB3P2-201ENST00000411913 APBA3O96018 575 aa6.21□□□□□ -1.42
HMGB3P2-201ENST00000411913 TATP17735 454 aaPredicted RBP6.21□□□□□ -1.42
HMGB3P2-201ENST00000411913 ATP4AP20648 1035 aa6.21□□□□□ -1.42
HMGB3P2-201ENST00000411913 ALAS2P22557 587 aa6.21□□□□□ -1.42
HMGB3P2-201ENST00000411913 TSGA10IPQ3SY00 556 aa6.21□□□□□ -1.42
HMGB3P2-201ENST00000411913 BANK1Q8NDB2 785 aa6.21□□□□□ -1.42
HMGB3P2-201ENST00000411913 INHAP05111 366 aa6.2□□□□□ -1.42
HMGB3P2-201ENST00000411913 EIF4G2P78344 907 aaKnown RBP eCLIP6.2□□□□□ -1.42
HMGB3P2-201ENST00000411913 RSPO4Q2I0M5 234 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P2-201ENST00000411913 MTMR14Q8NCE2 650 aa6.2□□□□□ -1.42
HMGB3P2-201ENST00000411913 IL27Q8NEV9 243 aa6.2□□□□□ -1.42
HMGB3P2-201ENST00000411913 GPR37L1O60883 481 aa6.19□□□□□ -1.42
HMGB3P2-201ENST00000411913 GDF10P55107 478 aa6.19□□□□□ -1.42
HMGB3P2-201ENST00000411913 ZNF468Q5VIY5 522 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P2-201ENST00000411913 ZFP64Q9NPA5 681 aa6.19□□□□□ -1.42
HMGB3P2-201ENST00000411913 TPSG1Q9NRR2 321 aa6.19□□□□□ -1.42
HMGB3P2-201ENST00000411913 MARK1Q9P0L2 795 aa6.19□□□□□ -1.42
HMGB3P2-201ENST00000411913 SOCS7O14512 581 aa6.18□□□□□ -1.42
HMGB3P2-201ENST00000411913 SMTNP53814 917 aa6.18□□□□□ -1.42
HMGB3P2-201ENST00000411913 NKAPLQ5M9Q1 402 aa6.18□□□□□ -1.42
HMGB3P2-201ENST00000411913 BICDL1Q6ZP65 573 aa6.18□□□□□ -1.42
HMGB3P2-201ENST00000411913 NBPF11Q86T75 865 aa6.18□□□□□ -1.42
HMGB3P2-201ENST00000411913 SERTAD1Q9UHV2 236 aa6.18□□□□□ -1.42
HMGB3P2-201ENST00000411913 HCN2Q9UL51 889 aa6.18□□□□□ -1.42
HMGB3P2-201ENST00000411913 ELOA3CA0A087WX78 387 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P2-201ENST00000411913 ELOA3DA6NLF2 546 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P2-201ENST00000411913 DYRK3O43781 588 aa6.17□□□□□ -1.42
HMGB3P2-201ENST00000411913 FAM157BP0CG42 384 aa6.17□□□□□ -1.42
HMGB3P2-201ENST00000411913 SCNN1DP51172 638 aa6.17□□□□□ -1.42
HMGB3P2-201ENST00000411913 ELOA3BQ3SY89 546 aa6.17□□□□□ -1.42
HMGB3P2-201ENST00000411913 KRTAP1-3Q8IUG1 177 aa6.17□□□□□ -1.42
HMGB3P2-201ENST00000411913 PHTF2Q8N3S3 785 aa6.17□□□□□ -1.42
HMGB3P2-201ENST00000411913 ELOA3Q8NG57 546 aa6.17□□□□□ -1.42
HMGB3P2-201ENST00000411913 ZIC5Q96T25 663 aa6.17□□□□□ -1.42
HMGB3P2-201ENST00000411913 SNRKQ9NRH2 765 aa6.17□□□□□ -1.42
HMGB3P2-201ENST00000411913 TRIM28Q13263 835 aaKnown RBP6.16□□□□□ -1.42
HMGB3P2-201ENST00000411913 FOXD4L6Q3SYB3 417 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P2-201ENST00000411913 ARTNQ5T4W7 220 aa6.16□□□□□ -1.42
HMGB3P2-201ENST00000411913 FOXD4L3Q6VB84 417 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P2-201ENST00000411913 NACC1Q96RE7 527 aa6.16□□□□□ -1.42
HMGB3P2-201ENST00000411913 ZDHHC3Q9NYG2 299 aa6.16□□□□□ -1.42
HMGB3P2-201ENST00000411913 CABP1Q9NZU7 370 aa6.16□□□□□ -1.42
HMGB3P2-201ENST00000411913 FAM229AH3BQW9 127 aa6.15□□□□□ -1.42
HMGB3P2-201ENST00000411913 LAMC2Q13753 1193 aa6.15□□□□□ -1.42
HMGB3P2-201ENST00000411913 SYT9Q86SS6 491 aa6.15□□□□□ -1.42
HMGB3P2-201ENST00000411913 PRM3Q9NNZ6 103 aa6.15□□□□□ -1.42
HMGB3P2-201ENST00000411913 STRN4Q9NRL3 753 aa6.15□□□□□ -1.42
HMGB3P2-201ENST00000411913 M0R082 166 aa6.14□□□□□ -1.43
HMGB3P2-201ENST00000411913 CDK2AP1O14519 115 aa6.14□□□□□ -1.43
HMGB3P2-201ENST00000411913 NEUROD2Q15784 382 aa6.14□□□□□ -1.43
HMGB3P2-201ENST00000411913 PRSS36Q5K4E3 855 aa6.14□□□□□ -1.43
HMGB3P2-201ENST00000411913 SAMD5Q5TGI4 173 aa6.14□□□□□ -1.43
HMGB3P2-201ENST00000411913 ZNF417Q8TAU3 575 aa6.14□□□□□ -1.43
HMGB3P2-201ENST00000411913 ZNF587Q96SQ5 575 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P2-201ENST00000411913 NEUROD4Q9HD90 331 aa6.14□□□□□ -1.43
HMGB3P2-201ENST00000411913 A6NJY4 79 aa6.13□□□□□ -1.43
HMGB3P2-201ENST00000411913 TBC1D2BQ9UPU7 963 aa6.13□□□□□ -1.43
HMGB3P2-201ENST00000411913 PARP3Q9Y6F1 533 aa6.13□□□□□ -1.43
HMGB3P2-201ENST00000411913 EFSO43281 561 aa6.12□□□□□ -1.43
HMGB3P2-201ENST00000411913 SIN3BO75182 1162 aa6.12□□□□□ -1.43
HMGB3P2-201ENST00000411913 MAP7D1Q3KQU3 841 aa6.12□□□□□ -1.43
HMGB3P2-201ENST00000411913 SLC4A9Q96Q91 983 aa6.12□□□□□ -1.43
HMGB3P2-201ENST00000411913 CHIC2Q9UKJ5 165 aa6.12□□□□□ -1.43
HMGB3P2-201ENST00000411913 MTFR1Q15390 333 aa6.11□□□□□ -1.43
HMGB3P2-201ENST00000411913 GRIK4Q16099 956 aa6.11□□□□□ -1.43
HMGB3P2-201ENST00000411913 LCE3BQ5TA77 95 aa6.11□□□□□ -1.43
HMGB3P2-201ENST00000411913 LRRC69Q6ZNQ3 347 aa6.11□□□□□ -1.43
HMGB3P2-201ENST00000411913 IQSEC3Q9UPP2 1182 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P2-201ENST00000411913 ADARB2-AS1A8MUL3 147 aa6.1□□□□□ -1.43
HMGB3P2-201ENST00000411913 TMEM229AB2RXF0 380 aa6.1□□□□□ -1.43
HMGB3P2-201ENST00000411913 TXLNAP40222 546 aa6.1□□□□□ -1.43
HMGB3P2-201ENST00000411913 NEUROD1Q13562 356 aa6.1□□□□□ -1.43
HMGB3P2-201ENST00000411913 TRAPPC3LQ5T215 181 aa6.1□□□□□ -1.43
HMGB3P2-201ENST00000411913 ZNF295-AS1Q8N0V1 137 aa6.1□□□□□ -1.43
HMGB3P2-201ENST00000411913 PLPP7Q8NBV4 271 aa6.1□□□□□ -1.43
HMGB3P2-201ENST00000411913 USP3Q9Y6I4 520 aa6.1□□□□□ -1.43
HMGB3P2-201ENST00000411913 C9orf172C9J069 976 aa6.09□□□□□ -1.43
HMGB3P2-201ENST00000411913 BACH1O14867 736 aa6.09□□□□□ -1.43
HMGB3P2-201ENST00000411913 ALBP02768 609 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms