RNA–Protein interactions for RNA: ENST00000410913.1

RN7SKP42-201, Transcript of RNA, 7SK small nuclear pseudogene 42, humanhuman

BASIC

Gene RN7SKP42, Length 300 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP42-201ENST00000410913 SOS2Q07890 1332 aaPredicted RBP11.25□□□□□ -0.61
RN7SKP42-201ENST00000410913 TNS3Q68CZ2 1445 aa11.25□□□□□ -0.61
RN7SKP42-201ENST00000410913 AMPHP49418 695 aa11.24□□□□□ -0.61
RN7SKP42-201ENST00000410913 WDR43Q15061 677 aaKnown RBP eCLIP11.24□□□□□ -0.61
RN7SKP42-201ENST00000410913 PRR14Q9BWN1 585 aa11.24□□□□□ -0.61
RN7SKP42-201ENST00000410913 AATKQ6ZMQ8 1374 aa11.24□□□□□ -0.61
RN7SKP42-201ENST00000410913 IQSEC2Q5JU85 1478 aa11.24□□□□□ -0.61
RN7SKP42-201ENST00000410913 KCNH5Q8NCM2 988 aa11.23□□□□□ -0.61
RN7SKP42-201ENST00000410913 CABLES1Q8TDN4 633 aa11.23□□□□□ -0.61
RN7SKP42-201ENST00000410913 ARHGEF10O15013 1369 aa11.22□□□□□ -0.61
RN7SKP42-201ENST00000410913 GCP02774 474 aa11.22□□□□□ -0.61
RN7SKP42-201ENST00000410913 MAP3K19Q56UN5 1328 aa11.22□□□□□ -0.61
RN7SKP42-201ENST00000410913 AHDC1Q5TGY3 1603 aaPredicted RBP11.22□□□□□ -0.61
RN7SKP42-201ENST00000410913 RGPD5Q99666 1765 aa11.22□□□□□ -0.61
RN7SKP42-201ENST00000410913 TMEM134Q9H6X4 195 aa11.22□□□□□ -0.61
RN7SKP42-201ENST00000410913 PEAK1Q9H792 1746 aa11.22□□□□□ -0.61
RN7SKP42-201ENST00000410913 SHPRHQ149N8 1683 aa11.21□□□□□ -0.61
RN7SKP42-201ENST00000410913 PHRF1Q9P1Y6 1649 aaKnown RBP11.21□□□□□ -0.61
RN7SKP42-201ENST00000410913 USP19O94966 1318 aa11.21□□□□□ -0.61
RN7SKP42-201ENST00000410913 SENP3-EIF4A1A0A087X0R7 540 aa11.21□□□□□ -0.61
RN7SKP42-201ENST00000410913 DIAPH1O60610 1272 aaKnown RBP11.21□□□□□ -0.61
RN7SKP42-201ENST00000410913 ZC3H6P61129 1189 aaKnown RBP11.21□□□□□ -0.61
RN7SKP42-201ENST00000410913 HIC1Q14526 733 aa11.21□□□□□ -0.61
RN7SKP42-201ENST00000410913 ADAMTS8Q9UP79 889 aa11.21□□□□□ -0.61
RN7SKP42-201ENST00000410913 MED1Q15648 1581 aaPredicted RBP11.2□□□□□ -0.62
RN7SKP42-201ENST00000410913 SLIT3O75094 1523 aa11.2□□□□□ -0.62
RN7SKP42-201ENST00000410913 RCCD1A6NED2 376 aa11.2□□□□□ -0.62
RN7SKP42-201ENST00000410913 U2SURPO15042 1029 aaKnown RBP11.2□□□□□ -0.62
RN7SKP42-201ENST00000410913 RBM26Q5T8P6 1007 aaKnown RBP11.2□□□□□ -0.62
RN7SKP42-201ENST00000410913 ZNF516Q92618 1163 aa11.2□□□□□ -0.62
RN7SKP42-201ENST00000410913 LRRC59Q96AG4 307 aaKnown RBP11.2□□□□□ -0.62
RN7SKP42-201ENST00000410913 NUDCQ9Y266 331 aa11.2□□□□□ -0.62
RN7SKP42-201ENST00000410913 NFAT5O94916 1531 aa11.19□□□□□ -0.62
RN7SKP42-201ENST00000410913 CDK12Q9NYV4 1490 aaPredicted RBP11.19□□□□□ -0.62
RN7SKP42-201ENST00000410913 CRYBG1Q9Y4K1 1723 aa11.19□□□□□ -0.62
RN7SKP42-201ENST00000410913 OATP04181 439 aa11.19□□□□□ -0.62
RN7SKP42-201ENST00000410913 FAM161AQ3B820 660 aa11.19□□□□□ -0.62
RN7SKP42-201ENST00000410913 HSP90AB2PQ58FF8 381 aa11.19□□□□□ -0.62
RN7SKP42-201ENST00000410913 LTV1Q96GA3 475 aaPredicted RBP11.19□□□□□ -0.62
RN7SKP42-201ENST00000410913 COL3A1P02461 1466 aaPredicted RBP11.19□□□□□ -0.62
RN7SKP42-201ENST00000410913 SMG6Q86US8 1419 aaKnown RBP11.18□□□□□ -0.62
RN7SKP42-201ENST00000410913 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.18□□□□□ -0.62
RN7SKP42-201ENST00000410913 U2AF1L5P0DN76 240 aaPredicted RBP11.18□□□□□ -0.62
RN7SKP42-201ENST00000410913 HOXC9P31274 260 aa11.18□□□□□ -0.62
RN7SKP42-201ENST00000410913 COPS2P61201 443 aa11.18□□□□□ -0.62
RN7SKP42-201ENST00000410913 HNRNPUQ00839 825 aaKnown RBP eCLIP11.18□□□□□ -0.62
RN7SKP42-201ENST00000410913 U2AF1Q01081 240 aaKnown RBP eCLIP11.18□□□□□ -0.62
RN7SKP42-201ENST00000410913 CCDC146Q8IYE0 955 aa11.18□□□□□ -0.62
RN7SKP42-201ENST00000410913 ABCA3Q99758 1704 aa11.18□□□□□ -0.62
RN7SKP42-201ENST00000410913 INSRP06213 1382 aa11.17□□□□□ -0.62
RN7SKP42-201ENST00000410913 FLT4P35916 1363 aa11.17□□□□□ -0.62
RN7SKP42-201ENST00000410913 PNPLA6Q8IY17 1366 aa11.17□□□□□ -0.62
RN7SKP42-201ENST00000410913 COL16A1Q07092 1604 aaPredicted RBP11.17□□□□□ -0.62
RN7SKP42-201ENST00000410913 EIF4A2Q14240 407 aaKnown RBP11.17□□□□□ -0.62
RN7SKP42-201ENST00000410913 PPP1R18Q6NYC8 613 aa11.17□□□□□ -0.62
RN7SKP42-201ENST00000410913 ARHGEF25Q86VW2 580 aa11.17□□□□□ -0.62
RN7SKP42-201ENST00000410913 IP6K1Q92551 441 aa11.17□□□□□ -0.62
RN7SKP42-201ENST00000410913 RGPD2P0DJD1 1756 aa11.17□□□□□ -0.62
RN7SKP42-201ENST00000410913 IL13P35225 146 aa11.16□□□□□ -0.62
RN7SKP42-201ENST00000410913 CHRNA2Q15822 529 aa11.16□□□□□ -0.62
RN7SKP42-201ENST00000410913 SALL2Q9Y467 1007 aaPredicted RBP11.16□□□□□ -0.62
RN7SKP42-201ENST00000410913 PCDHB3Q9Y5E6 796 aa11.16□□□□□ -0.62
RN7SKP42-201ENST00000410913 HMOX1P09601 288 aa11.15□□□□□ -0.62
RN7SKP42-201ENST00000410913 KMT5BQ4FZB7 885 aa11.15□□□□□ -0.62
RN7SKP42-201ENST00000410913 PXYLP1Q8TE99 480 aa11.15□□□□□ -0.62
RN7SKP42-201ENST00000410913 RTL1A6NKG5 1358 aa11.15□□□□□ -0.63
RN7SKP42-201ENST00000410913 COL18A1P39060 1754 aa11.14□□□□□ -0.63
RN7SKP42-201ENST00000410913 NUTM2BA6NNL0 878 aaPredicted RBP11.14□□□□□ -0.63
RN7SKP42-201ENST00000410913 NUTM2EB1AL46 878 aaPredicted RBP11.14□□□□□ -0.63
RN7SKP42-201ENST00000410913 GNPATO15228 680 aa11.14□□□□□ -0.63
RN7SKP42-201ENST00000410913 NUTM2AQ8IVF1 878 aaPredicted RBP11.14□□□□□ -0.63
RN7SKP42-201ENST00000410913 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.14□□□□□ -0.63
RN7SKP42-201ENST00000410913 KIF24Q5T7B8 1368 aa11.14□□□□□ -0.63
RN7SKP42-201ENST00000410913 KIAA0232Q92628 1395 aa11.14□□□□□ -0.63
RN7SKP42-201ENST00000410913 COL22A1Q8NFW1 1626 aaPredicted RBP11.13□□□□□ -0.63
RN7SKP42-201ENST00000410913 ZPR1O75312 459 aa11.13□□□□□ -0.63
RN7SKP42-201ENST00000410913 GGCXP38435 758 aa11.13□□□□□ -0.63
RN7SKP42-201ENST00000410913 PRDM11Q9NQV5 511 aa11.13□□□□□ -0.63
RN7SKP42-201ENST00000410913 BLMP54132 1417 aaPredicted RBP11.12□□□□□ -0.63
RN7SKP42-201ENST00000410913 ACTN4O43707 911 aaKnown RBP11.12□□□□□ -0.63
RN7SKP42-201ENST00000410913 HSPA1LP34931 641 aa11.12□□□□□ -0.63
RN7SKP42-201ENST00000410913 METTL3Q86U44 580 aaKnown RBP11.12□□□□□ -0.63
RN7SKP42-201ENST00000410913 NKX2-3Q8TAU0 364 aa11.12□□□□□ -0.63
RN7SKP42-201ENST00000410913 ANKRD24Q8TF21 1146 aa11.12□□□□□ -0.63
RN7SKP42-201ENST00000410913 RUNDC1Q96C34 613 aa11.12□□□□□ -0.63
RN7SKP42-201ENST00000410913 PNNQ9H307 717 aaKnown RBP11.12□□□□□ -0.63
RN7SKP42-201ENST00000410913 APAF1O14727 1248 aa11.11□□□□□ -0.63
RN7SKP42-201ENST00000410913 GPR37O15354 613 aa11.11□□□□□ -0.63
RN7SKP42-201ENST00000410913 ADAMTS2O95450 1211 aa11.11□□□□□ -0.63
RN7SKP42-201ENST00000410913 NEFMP07197 916 aa11.11□□□□□ -0.63
RN7SKP42-201ENST00000410913 CFHP08603 1231 aa11.11□□□□□ -0.63
RN7SKP42-201ENST00000410913 CSB-PGBD3P0DP91 1061 aa11.11□□□□□ -0.63
RN7SKP42-201ENST00000410913 PRKAR2BP31323 418 aa11.11□□□□□ -0.63
RN7SKP42-201ENST00000410913 SULT6B1Q6IMI4 303 aa11.11□□□□□ -0.63
RN7SKP42-201ENST00000410913 USHBP1Q8N6Y0 703 aa11.11□□□□□ -0.63
RN7SKP42-201ENST00000410913 RGPD1P0DJD0 1748 aa11.11□□□□□ -0.63
RN7SKP42-201ENST00000410913 CPDO75976 1380 aa11.11□□□□□ -0.63
RN7SKP42-201ENST00000410913 MAPK8IP3Q9UPT6 1336 aa11.1□□□□□ -0.63
RN7SKP42-201ENST00000410913 FAM83GA6ND36 823 aa11.1□□□□□ -0.63
RN7SKP42-201ENST00000410913 NEUROD2Q15784 382 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms