RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 LAMB4A4D0S4 1761 aa19.64■□□□□ 0.73
LSM5-207ENST00000410044 STARD3NLO95772 234 aa19.63■□□□□ 0.73
LSM5-207ENST00000410044 EZH2Q15910 746 aaKnown RBP19.63■□□□□ 0.73
LSM5-207ENST00000410044 DEFB132Q7Z7B7 95 aa19.63■□□□□ 0.73
LSM5-207ENST00000410044 CACNA1FO60840 1977 aa19.63■□□□□ 0.73
LSM5-207ENST00000410044 ERBB4Q15303 1308 aa19.62■□□□□ 0.73
LSM5-207ENST00000410044 MYH14Q7Z406 1995 aaKnown RBP19.61■□□□□ 0.73
LSM5-207ENST00000410044 CNTNAP4Q9C0A0 1308 aa19.61■□□□□ 0.73
LSM5-207ENST00000410044 KCNQ4P56696 695 aa19.61■□□□□ 0.73
LSM5-207ENST00000410044 LINC00116Q8NCU8 138 aa19.61■□□□□ 0.73
LSM5-207ENST00000410044 RREB1Q92766 1687 aa19.61■□□□□ 0.73
LSM5-207ENST00000410044 HDGFL1Q5TGJ6 251 aa19.6■□□□□ 0.73
LSM5-207ENST00000410044 CCDC30Q5VVM6 783 aa19.6■□□□□ 0.73
LSM5-207ENST00000410044 INTS5Q6P9B9 1019 aaKnown RBP19.6■□□□□ 0.73
LSM5-207ENST00000410044 EIF2S2P20042 333 aaKnown RBP19.59■□□□□ 0.73
LSM5-207ENST00000410044 PDIA6Q15084 440 aa19.59■□□□□ 0.73
LSM5-207ENST00000410044 ALDH1L2Q3SY69 923 aa19.59■□□□□ 0.73
LSM5-207ENST00000410044 A1BGP04217 495 aa19.58■□□□□ 0.72
LSM5-207ENST00000410044 CRKLP46109 303 aaKnown RBP19.58■□□□□ 0.72
LSM5-207ENST00000410044 DDX21Q9NR30 783 aaKnown RBP eCLIP19.58■□□□□ 0.72
LSM5-207ENST00000410044 CCDC87Q9NVE4 849 aa19.58■□□□□ 0.72
LSM5-207ENST00000410044 DBF4Q9UBU7 674 aaPredicted RBP19.58■□□□□ 0.72
LSM5-207ENST00000410044 C4BP0C0L5 1744 aa19.57■□□□□ 0.72
LSM5-207ENST00000410044 BRPF1P55201 1214 aaPredicted RBP19.57■□□□□ 0.72
LSM5-207ENST00000410044 NBPF26B4DH59 902 aa19.56■□□□□ 0.72
LSM5-207ENST00000410044 RPS6KA4O75676 772 aa19.56■□□□□ 0.72
LSM5-207ENST00000410044 RARSP54136 660 aaKnown RBP19.56■□□□□ 0.72
LSM5-207ENST00000410044 NBPF14Q5TI25 921 aa19.56■□□□□ 0.72
LSM5-207ENST00000410044 NBPF10Q6P3W6 841 aaKnown RBP19.56■□□□□ 0.72
LSM5-207ENST00000410044 LRP10Q7Z4F1 713 aa19.56■□□□□ 0.72
LSM5-207ENST00000410044 NBPF15Q8N660 670 aa19.56■□□□□ 0.72
LSM5-207ENST00000410044 AKT1S1Q96B36 256 aa19.56■□□□□ 0.72
LSM5-207ENST00000410044 IL6STP40189 918 aaPredicted RBP19.55■□□□□ 0.72
LSM5-207ENST00000410044 NUP188Q5SRE5 1749 aa19.55■□□□□ 0.72
LSM5-207ENST00000410044 EIF5P55010 431 aaKnown RBP19.54■□□□□ 0.72
LSM5-207ENST00000410044 SSH1Q8WYL5 1049 aa19.54■□□□□ 0.72
LSM5-207ENST00000410044 NECTIN2Q92692 538 aa19.54■□□□□ 0.72
LSM5-207ENST00000410044 STK31Q9BXU1 1019 aa19.54■□□□□ 0.72
LSM5-207ENST00000410044 HYPKQ9NX55 129 aa19.54■□□□□ 0.72
LSM5-207ENST00000410044 CHPF2Q9P2E5 772 aa19.54■□□□□ 0.72
LSM5-207ENST00000410044 ZBTB1Q9Y2K1 713 aa19.54■□□□□ 0.72
LSM5-207ENST00000410044 SLC4A2P04920 1241 aa19.53■□□□□ 0.72
LSM5-207ENST00000410044 MRPL50Q8N5N7 158 aaKnown RBP19.53■□□□□ 0.72
LSM5-207ENST00000410044 UBR3Q6ZT12 1888 aa19.52■□□□□ 0.72
LSM5-207ENST00000410044 CANXP27824 592 aaKnown RBP19.52■□□□□ 0.72
LSM5-207ENST00000410044 PROSER3Q2NL68 480 aa19.52■□□□□ 0.72
LSM5-207ENST00000410044 AK7Q96M32 723 aa19.51■□□□□ 0.71
LSM5-207ENST00000410044 RCAN3Q9UKA8 241 aa19.51■□□□□ 0.71
LSM5-207ENST00000410044 RTCBQ9Y3I0 505 aaKnown RBP19.51■□□□□ 0.71
LSM5-207ENST00000410044 ADRA2BP18089 450 aa19.5■□□□□ 0.71
LSM5-207ENST00000410044 SLC15A2Q16348 729 aa19.5■□□□□ 0.71
LSM5-207ENST00000410044 ZNF827Q17R98 1081 aa19.5■□□□□ 0.71
LSM5-207ENST00000410044 TCERG1O14776 1098 aaKnown RBP19.49■□□□□ 0.71
LSM5-207ENST00000410044 GNPATO15228 680 aa19.49■□□□□ 0.71
LSM5-207ENST00000410044 ANXA1P04083 346 aa19.49■□□□□ 0.71
LSM5-207ENST00000410044 MYL6BP14649 208 aa19.49■□□□□ 0.71
LSM5-207ENST00000410044 SSFA2P28290 1259 aa19.49■□□□□ 0.71
LSM5-207ENST00000410044 PIP4K2AP48426 406 aaPredicted RBP19.49■□□□□ 0.71
LSM5-207ENST00000410044 QSER1Q2KHR3 1735 aa19.48■□□□□ 0.71
LSM5-207ENST00000410044 A0A087WZG4 1122 aa19.48■□□□□ 0.71
LSM5-207ENST00000410044 FLAD1Q8NFF5 587 aa19.48■□□□□ 0.71
LSM5-207ENST00000410044 PHAXQ9H814 394 aaKnown RBP19.48■□□□□ 0.71
LSM5-207ENST00000410044 SMC4Q9NTJ3 1288 aa19.48■□□□□ 0.71
LSM5-207ENST00000410044 STK32BQ9NY57 414 aa19.48■□□□□ 0.71
LSM5-207ENST00000410044 SOCS7O14512 581 aa19.47■□□□□ 0.71
LSM5-207ENST00000410044 BCAR3O75815 825 aa19.47■□□□□ 0.71
LSM5-207ENST00000410044 TRAPPC3LQ5T215 181 aa19.47■□□□□ 0.71
LSM5-207ENST00000410044 COPS6Q7L5N1 327 aa19.47■□□□□ 0.71
LSM5-207ENST00000410044 G2E3Q7L622 706 aa19.47■□□□□ 0.71
LSM5-207ENST00000410044 AMIGO3Q86WK7 504 aa19.47■□□□□ 0.71
LSM5-207ENST00000410044 ANO8Q9HCE9 1232 aaPredicted RBP19.47■□□□□ 0.71
LSM5-207ENST00000410044 RGL2O15211 777 aa19.46■□□□□ 0.71
LSM5-207ENST00000410044 XAGE3Q8WTP9 111 aa19.46■□□□□ 0.71
LSM5-207ENST00000410044 ARHGAP45Q92619 1136 aa19.46■□□□□ 0.71
LSM5-207ENST00000410044 ARHGEF1Q92888 912 aaKnown RBP19.46■□□□□ 0.71
LSM5-207ENST00000410044 TFCP2L1Q9NZI6 479 aa19.46■□□□□ 0.71
LSM5-207ENST00000410044 COL15A1P39059 1388 aa19.45■□□□□ 0.7
LSM5-207ENST00000410044 FLIIQ13045 1269 aa19.45■□□□□ 0.7
LSM5-207ENST00000410044 NPM2Q86SE8 214 aaKnown RBP19.45■□□□□ 0.7
LSM5-207ENST00000410044 BCL2L13Q9BXK5 485 aa19.45■□□□□ 0.7
LSM5-207ENST00000410044 TUBGCP6Q96RT7 1819 aa19.45■□□□□ 0.7
LSM5-207ENST00000410044 PTPRCP08575 1304 aa19.45■□□□□ 0.7
LSM5-207ENST00000410044 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.44■□□□□ 0.7
LSM5-207ENST00000410044 ERVV-1B6SEH8 477 aa19.44■□□□□ 0.7
LSM5-207ENST00000410044 TTLL7Q6ZT98 887 aa19.44■□□□□ 0.7
LSM5-207ENST00000410044 NARFQ9UHQ1 456 aa19.44■□□□□ 0.7
LSM5-207ENST00000410044 KIF16BQ96L93 1317 aa19.44■□□□□ 0.7
LSM5-207ENST00000410044 ANKRD13DQ6ZTN6 518 aa19.43■□□□□ 0.7
LSM5-207ENST00000410044 DZIP3Q86Y13 1208 aaKnown RBP19.43■□□□□ 0.7
LSM5-207ENST00000410044 PLBD2Q8NHP8 589 aa19.43■□□□□ 0.7
LSM5-207ENST00000410044 NOB1Q9ULX3 412 aaKnown RBP19.43■□□□□ 0.7
LSM5-207ENST00000410044 PNPLA7Q6ZV29 1317 aa19.43■□□□□ 0.7
LSM5-207ENST00000410044 IPO8O15397 1037 aaKnown RBP19.42■□□□□ 0.7
LSM5-207ENST00000410044 DDX58O95786 925 aaKnown RBP19.42■□□□□ 0.7
LSM5-207ENST00000410044 CENPBP07199 599 aaPredicted RBP19.42■□□□□ 0.7
LSM5-207ENST00000410044 AIMP1Q12904 312 aaKnown RBP19.42■□□□□ 0.7
LSM5-207ENST00000410044 KSR2Q6VAB6 950 aa19.42■□□□□ 0.7
LSM5-207ENST00000410044 SMIM5Q71RC9 77 aa19.42■□□□□ 0.7
LSM5-207ENST00000410044 COL23A1Q86Y22 540 aaPredicted RBP19.42■□□□□ 0.7
LSM5-207ENST00000410044 TBC1D2BQ9UPU7 963 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms