RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 IP6K1Q92551 441 aa9.51□□□□□ -0.89
CXCR4-202ENST00000409817 THUMPD2Q9BTF0 503 aaKnown RBP9.51□□□□□ -0.89
CXCR4-202ENST00000409817 PCDHGA10Q9Y5H3 936 aa9.51□□□□□ -0.89
CXCR4-202ENST00000409817 SOS1Q07889 1333 aaPredicted RBP9.5□□□□□ -0.89
CXCR4-202ENST00000409817 SLIT3O75094 1523 aa9.5□□□□□ -0.89
CXCR4-202ENST00000409817 PHF14O94880 888 aa9.5□□□□□ -0.89
CXCR4-202ENST00000409817 IGHDP01880 384 aa9.5□□□□□ -0.89
CXCR4-202ENST00000409817 HDAC1Q13547 482 aaPredicted RBP9.5□□□□□ -0.89
CXCR4-202ENST00000409817 MRPL50Q8N5N7 158 aaKnown RBP9.5□□□□□ -0.89
CXCR4-202ENST00000409817 REPIN1Q9BWE0 567 aaKnown RBP9.5□□□□□ -0.89
CXCR4-202ENST00000409817 BABAM1Q9NWV8 329 aa9.5□□□□□ -0.89
CXCR4-202ENST00000409817 LTN1O94822 1766 aa9.5□□□□□ -0.89
CXCR4-202ENST00000409817 C1orf167Q5SNV9 1468 aa9.49□□□□□ -0.89
CXCR4-202ENST00000409817 FAM161AQ3B820 660 aa9.49□□□□□ -0.89
CXCR4-202ENST00000409817 ITPRIPQ8IWB1 547 aa9.49□□□□□ -0.89
CXCR4-202ENST00000409817 API5Q9BZZ5 524 aaKnown RBP9.49□□□□□ -0.89
CXCR4-202ENST00000409817 CRB1P82279 1406 aa9.49□□□□□ -0.89
CXCR4-202ENST00000409817 FAM83GA6ND36 823 aa9.49□□□□□ -0.89
CXCR4-202ENST00000409817 MTHFSDQ2M296 383 aaKnown RBP9.49□□□□□ -0.89
CXCR4-202ENST00000409817 PCDHB15Q9Y5E8 787 aa9.49□□□□□ -0.89
CXCR4-202ENST00000409817 USP19O94966 1318 aa9.48□□□□□ -0.89
CXCR4-202ENST00000409817 TSR1Q2NL82 804 aaKnown RBP9.48□□□□□ -0.89
CXCR4-202ENST00000409817 TMEM57Q8N5G2 664 aa9.48□□□□□ -0.89
CXCR4-202ENST00000409817 DDRGK1Q96HY6 314 aa9.48□□□□□ -0.89
CXCR4-202ENST00000409817 TRPM3Q9HCF6 1732 aaPredicted RBP9.48□□□□□ -0.89
CXCR4-202ENST00000409817 ZBTB40Q9NUA8 1239 aa9.48□□□□□ -0.89
CXCR4-202ENST00000409817 TNNQ9UQP3 1299 aa9.48□□□□□ -0.89
CXCR4-202ENST00000409817 PCDHGA4Q9Y5G9 962 aa9.48□□□□□ -0.89
CXCR4-202ENST00000409817 LRRC37A3O60309 1634 aa9.48□□□□□ -0.89
CXCR4-202ENST00000409817 ABCC4O15439 1325 aa9.47□□□□□ -0.89
CXCR4-202ENST00000409817 GNAT3A8MTJ3 354 aa9.47□□□□□ -0.89
CXCR4-202ENST00000409817 ATF3P18847 181 aa9.47□□□□□ -0.89
CXCR4-202ENST00000409817 DCTN1Q14203 1278 aa9.47□□□□□ -0.89
CXCR4-202ENST00000409817 NUTM2GQ5VZR2 741 aa9.47□□□□□ -0.89
CXCR4-202ENST00000409817 TSPYL6Q8N831 410 aa9.47□□□□□ -0.89
CXCR4-202ENST00000409817 C8orf58Q8NAV2 365 aa9.47□□□□□ -0.89
CXCR4-202ENST00000409817 EPAS1Q99814 870 aa9.47□□□□□ -0.89
CXCR4-202ENST00000409817 MCM10Q7L590 875 aa9.47□□□□□ -0.89
CXCR4-202ENST00000409817 RBM33Q96EV2 1170 aaKnown RBP9.47□□□□□ -0.89
CXCR4-202ENST00000409817 ORAI2Q96SN7 254 aa9.47□□□□□ -0.89
CXCR4-202ENST00000409817 PHOX2BQ99453 314 aa9.47□□□□□ -0.89
CXCR4-202ENST00000409817 MAP3K5Q99683 1374 aa9.46□□□□□ -0.89
CXCR4-202ENST00000409817 PTPRCP08575 1304 aa9.46□□□□□ -0.89
CXCR4-202ENST00000409817 NCAPD2Q15021 1401 aa9.46□□□□□ -0.89
CXCR4-202ENST00000409817 MAP3K7O43318 606 aa9.46□□□□□ -0.9
CXCR4-202ENST00000409817 FOXO3O43524 673 aa9.46□□□□□ -0.9
CXCR4-202ENST00000409817 GCP02774 474 aa9.46□□□□□ -0.9
CXCR4-202ENST00000409817 GIGYF2Q6Y7W6 1299 aaKnown RBP9.46□□□□□ -0.9
CXCR4-202ENST00000409817 KRT28Q7Z3Y7 464 aa9.46□□□□□ -0.9
CXCR4-202ENST00000409817 ARHGEF25Q86VW2 580 aa9.46□□□□□ -0.9
CXCR4-202ENST00000409817 IPO9Q96P70 1041 aaKnown RBP9.46□□□□□ -0.9
CXCR4-202ENST00000409817 CHMP4AQ9BY43 222 aa9.46□□□□□ -0.9
CXCR4-202ENST00000409817 TMEM94Q12767 1356 aa9.46□□□□□ -0.9
CXCR4-202ENST00000409817 TTLL12Q14166 644 aaPredicted RBP9.45□□□□□ -0.9
CXCR4-202ENST00000409817 SLAIN1Q8ND83 568 aa9.45□□□□□ -0.9
CXCR4-202ENST00000409817 TMUB1Q9BVT8 246 aa9.45□□□□□ -0.9
CXCR4-202ENST00000409817 ALS2Q96Q42 1657 aa9.45□□□□□ -0.9
CXCR4-202ENST00000409817 PLEKHG2Q9H7P9 1386 aa9.45□□□□□ -0.9
CXCR4-202ENST00000409817 RGS3P49796 1198 aa9.45□□□□□ -0.9
CXCR4-202ENST00000409817 SMC5Q8IY18 1101 aa9.45□□□□□ -0.9
CXCR4-202ENST00000409817 ARXQ96QS3 562 aa9.45□□□□□ -0.9
CXCR4-202ENST00000409817 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.45□□□□□ -0.9
CXCR4-202ENST00000409817 TSPYL4Q9UJ04 414 aa9.45□□□□□ -0.9
CXCR4-202ENST00000409817 ABCC6O95255 1503 aa9.44□□□□□ -0.9
CXCR4-202ENST00000409817 LMTK3Q96Q04 1460 aa9.44□□□□□ -0.9
CXCR4-202ENST00000409817 ELL2O00472 640 aaPredicted RBP9.44□□□□□ -0.9
CXCR4-202ENST00000409817 ZBTB7BO15156 539 aaPredicted RBP9.44□□□□□ -0.9
CXCR4-202ENST00000409817 C8orf34Q49A92 452 aa9.44□□□□□ -0.9
CXCR4-202ENST00000409817 AMOTQ4VCS5 1084 aa9.44□□□□□ -0.9
CXCR4-202ENST00000409817 NPHP3Q7Z494 1330 aa9.44□□□□□ -0.9
CXCR4-202ENST00000409817 VIRMAQ69YN4 1812 aaKnown RBP9.43□□□□□ -0.9
CXCR4-202ENST00000409817 MSH6P52701 1360 aa9.43□□□□□ -0.9
CXCR4-202ENST00000409817 INTS3Q68E01 1043 aaKnown RBP9.43□□□□□ -0.9
CXCR4-202ENST00000409817 PDZRN3Q9UPQ7 1066 aa9.43□□□□□ -0.9
CXCR4-202ENST00000409817 CAMTA1Q9Y6Y1 1673 aa9.43□□□□□ -0.9
CXCR4-202ENST00000409817 OVOS2A0A0G2JMS6 1433 aa9.43□□□□□ -0.9
CXCR4-202ENST00000409817 STRCP1A6NGW2 1772 aa9.43□□□□□ -0.9
CXCR4-202ENST00000409817 CEMIPQ8WUJ3 1361 aa9.43□□□□□ -0.9
CXCR4-202ENST00000409817 CACNA1FO60840 1977 aa9.43□□□□□ -0.9
CXCR4-202ENST00000409817 TAF7Q15545 349 aaPredicted RBP9.42□□□□□ -0.9
CXCR4-202ENST00000409817 TYW1BQ6NUM6 668 aa9.42□□□□□ -0.9
CXCR4-202ENST00000409817 GCC1Q96CN9 775 aa9.42□□□□□ -0.9
CXCR4-202ENST00000409817 LTV1Q96GA3 475 aaPredicted RBP9.42□□□□□ -0.9
CXCR4-202ENST00000409817 POTEJP0CG39 1038 aa9.42□□□□□ -0.9
CXCR4-202ENST00000409817 PLEKHO1Q53GL0 409 aaPredicted RBP9.42□□□□□ -0.9
CXCR4-202ENST00000409817 SKAP1Q86WV1 359 aa9.42□□□□□ -0.9
CXCR4-202ENST00000409817 ANP32EQ9BTT0 268 aa9.42□□□□□ -0.9
CXCR4-202ENST00000409817 NOP58Q9Y2X3 529 aaKnown RBP9.42□□□□□ -0.9
CXCR4-202ENST00000409817 MED1Q15648 1581 aaPredicted RBP9.41□□□□□ -0.9
CXCR4-202ENST00000409817 HOXB7P09629 217 aa9.41□□□□□ -0.9
CXCR4-202ENST00000409817 FOSBP53539 338 aa9.41□□□□□ -0.9
CXCR4-202ENST00000409817 MYT1Q01538 1121 aa9.41□□□□□ -0.9
CXCR4-202ENST00000409817 NBPF6Q5VWK0 638 aa9.41□□□□□ -0.9
CXCR4-202ENST00000409817 NBPF4Q96M43 638 aa9.41□□□□□ -0.9
CXCR4-202ENST00000409817 LMO7Q8WWI1 1683 aa9.41□□□□□ -0.9
CXCR4-202ENST00000409817 AKAP4Q5JQC9 854 aa9.4□□□□□ -0.9
CXCR4-202ENST00000409817 CCDC30Q5VVM6 783 aa9.4□□□□□ -0.9
CXCR4-202ENST00000409817 IL17REQ8NFR9 667 aa9.4□□□□□ -0.9
CXCR4-202ENST00000409817 STK31Q9BXU1 1019 aa9.4□□□□□ -0.9
CXCR4-202ENST00000409817 RGS12O14924 1447 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms