RNA–Protein interactions for RNA: ENST00000409776.6

RGPD1-202, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 6,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-202ENST00000409776 CARD11Q9BXL7 1154 aa4.76□□□□□ -1.65
RGPD1-202ENST00000409776 LMNAP02545 664 aaKnown RBP4.75□□□□□ -1.65
RGPD1-202ENST00000409776 LRRFIP1Q32MZ4 808 aaKnown RBP4.75□□□□□ -1.65
RGPD1-202ENST00000409776 CEP70Q8NHQ1 597 aa4.75□□□□□ -1.65
RGPD1-202ENST00000409776 MIS18AQ9NYP9 233 aa4.75□□□□□ -1.65
RGPD1-202ENST00000409776 DDX49Q9Y6V7 483 aaKnown RBP4.75□□□□□ -1.65
RGPD1-202ENST00000409776 DHX16O60231 1041 aaKnown RBP4.75□□□□□ -1.65
RGPD1-202ENST00000409776 LMNTD2Q8IXW0 634 aa4.75□□□□□ -1.65
RGPD1-202ENST00000409776 ENAHQ8N8S7 591 aaPredicted RBP4.75□□□□□ -1.65
RGPD1-202ENST00000409776 SRRTQ9BXP5 876 aaKnown RBP4.75□□□□□ -1.65
RGPD1-202ENST00000409776 NSRP1Q9H0G5 558 aaKnown RBP4.75□□□□□ -1.65
RGPD1-202ENST00000409776 POTECB2RU33 542 aa4.75□□□□□ -1.65
RGPD1-202ENST00000409776 USP5P45974 858 aa4.75□□□□□ -1.65
RGPD1-202ENST00000409776 INPP1P49441 399 aa4.75□□□□□ -1.65
RGPD1-202ENST00000409776 MCCD1P59942 119 aaPredicted RBP4.75□□□□□ -1.65
RGPD1-202ENST00000409776 CCDC144BQ3MJ40 725 aa4.75□□□□□ -1.65
RGPD1-202ENST00000409776 DDX42Q86XP3 938 aaKnown RBP eCLIP4.75□□□□□ -1.65
RGPD1-202ENST00000409776 KLHDC4Q8TBB5 520 aa4.75□□□□□ -1.65
RGPD1-202ENST00000409776 MMRN2Q9H8L6 949 aa4.75□□□□□ -1.65
RGPD1-202ENST00000409776 VPS37CA5D8V6 355 aaPredicted RBP4.75□□□□□ -1.65
RGPD1-202ENST00000409776 IVLP07476 585 aa4.75□□□□□ -1.65
RGPD1-202ENST00000409776 SDCCAG8Q86SQ7 713 aaPredicted RBP4.75□□□□□ -1.65
RGPD1-202ENST00000409776 ZNF354CQ86Y25 554 aa4.75□□□□□ -1.65
RGPD1-202ENST00000409776 ERMNQ8TAM6 284 aa4.75□□□□□ -1.65
RGPD1-202ENST00000409776 TXNDC9O14530 226 aa4.75□□□□□ -1.65
RGPD1-202ENST00000409776 SMIM24O75264 130 aa4.75□□□□□ -1.65
RGPD1-202ENST00000409776 HCLS1P14317 486 aaPredicted RBP4.75□□□□□ -1.65
RGPD1-202ENST00000409776 ARHGAP25P42331 645 aa4.75□□□□□ -1.65
RGPD1-202ENST00000409776 TSC22D1Q15714 1073 aa4.75□□□□□ -1.65
RGPD1-202ENST00000409776 MCM10Q7L590 875 aa4.75□□□□□ -1.65
RGPD1-202ENST00000409776 NUDCD3Q8IVD9 361 aa4.75□□□□□ -1.65
RGPD1-202ENST00000409776 JAKMIP2Q96AA8 810 aa4.75□□□□□ -1.65
RGPD1-202ENST00000409776 CCDC69A6NI79 296 aa4.74□□□□□ -1.65
RGPD1-202ENST00000409776 TRAF5O00463 557 aa4.74□□□□□ -1.65
RGPD1-202ENST00000409776 CDC40O60508 579 aaKnown RBP eCLIP4.74□□□□□ -1.65
RGPD1-202ENST00000409776 CCDC159P0C7I6 412 aa4.74□□□□□ -1.65
RGPD1-202ENST00000409776 FOSL1P15407 271 aa4.74□□□□□ -1.65
RGPD1-202ENST00000409776 TXLNAP40222 546 aa4.74□□□□□ -1.65
RGPD1-202ENST00000409776 SH3GL2Q99962 352 aa4.74□□□□□ -1.65
RGPD1-202ENST00000409776 hCG_2014768A0A024R1R8 64 aa4.74□□□□□ -1.65
RGPD1-202ENST00000409776 NBPF7P0C2Y1 421 aaPredicted RBP4.74□□□□□ -1.65
RGPD1-202ENST00000409776 NBPF9Q3BBW0 867 aa4.74□□□□□ -1.65
RGPD1-202ENST00000409776 P3H4Q92791 437 aa4.74□□□□□ -1.65
RGPD1-202ENST00000409776 JADE2Q9NQC1 790 aa4.74□□□□□ -1.65
RGPD1-202ENST00000409776 DDX21Q9NR30 783 aaKnown RBP eCLIP4.74□□□□□ -1.65
RGPD1-202ENST00000409776 FAF1Q9UNN5 650 aaPredicted RBP4.74□□□□□ -1.65
RGPD1-202ENST00000409776 HNRNPCP07910 306 aaKnown RBP eCLIP4.74□□□□□ -1.65
RGPD1-202ENST00000409776 GKAP1Q5VSY0 366 aaPredicted RBP4.74□□□□□ -1.65
RGPD1-202ENST00000409776 MICALL1Q8N3F8 863 aa4.74□□□□□ -1.65
RGPD1-202ENST00000409776 CENPKQ9BS16 269 aa4.74□□□□□ -1.65
RGPD1-202ENST00000409776 MRPS26Q9BYN8 205 aaKnown RBP4.74□□□□□ -1.65
RGPD1-202ENST00000409776 ABCF2Q9UG63 623 aa4.74□□□□□ -1.65
RGPD1-202ENST00000409776 CARSP49589 748 aaKnown RBP4.74□□□□□ -1.65
RGPD1-202ENST00000409776 SPC24Q8NBT2 197 aa4.74□□□□□ -1.65
RGPD1-202ENST00000409776 SCLT1Q96NL6 688 aa4.74□□□□□ -1.65
RGPD1-202ENST00000409776 CCDC68Q9H2F9 335 aa4.74□□□□□ -1.65
RGPD1-202ENST00000409776 CENPJQ9HC77 1338 aaPredicted RBP4.74□□□□□ -1.65
RGPD1-202ENST00000409776 SMARCA5O60264 1052 aaPredicted RBP4.74□□□□□ -1.65
RGPD1-202ENST00000409776 RNF40O75150 1001 aa4.74□□□□□ -1.65
RGPD1-202ENST00000409776 PCYT1AP49585 367 aa4.74□□□□□ -1.65
RGPD1-202ENST00000409776 MRPS35P82673 323 aaKnown RBP4.74□□□□□ -1.65
RGPD1-202ENST00000409776 PABPN1Q86U42 306 aaKnown RBP eCLIP4.74□□□□□ -1.65
RGPD1-202ENST00000409776 GFM2Q969S9 779 aaKnown RBP4.74□□□□□ -1.65
RGPD1-202ENST00000409776 PLVAPQ9BX97 442 aa4.74□□□□□ -1.65
RGPD1-202ENST00000409776 E9PMD0 336 aa4.74□□□□□ -1.65
RGPD1-202ENST00000409776 PRDM1O75626 825 aa4.74□□□□□ -1.65
RGPD1-202ENST00000409776 C1orf94Q6P1W5 598 aa4.74□□□□□ -1.65
RGPD1-202ENST00000409776 CACNA2D3Q8IZS8 1091 aa4.74□□□□□ -1.65
RGPD1-202ENST00000409776 ANKRD35Q8N283 1001 aa4.74□□□□□ -1.65
RGPD1-202ENST00000409776 RFWD2Q8NHY2 731 aa4.74□□□□□ -1.65
RGPD1-202ENST00000409776 PNISRQ8TF01 805 aaKnown RBP4.74□□□□□ -1.65
RGPD1-202ENST00000409776 TSPY26PQ9H489 355 aa4.74□□□□□ -1.65
RGPD1-202ENST00000409776 DNAJC8O75937 253 aaPredicted RBP4.73□□□□□ -1.65
RGPD1-202ENST00000409776 DYNC1I2Q13409 638 aaKnown RBP4.73□□□□□ -1.65
RGPD1-202ENST00000409776 MAATS1Q7Z4T9 603 aa4.73□□□□□ -1.65
RGPD1-202ENST00000409776 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.73□□□□□ -1.65
RGPD1-202ENST00000409776 ANLNQ9NQW6 1124 aa4.73□□□□□ -1.65
RGPD1-202ENST00000409776 UTP6Q9NYH9 597 aaKnown RBP4.73□□□□□ -1.65
RGPD1-202ENST00000409776 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.73□□□□□ -1.65
RGPD1-202ENST00000409776 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.73□□□□□ -1.65
RGPD1-202ENST00000409776 ARHGEF9O43307 516 aa4.73□□□□□ -1.65
RGPD1-202ENST00000409776 EPS15P42566 896 aa4.73□□□□□ -1.65
RGPD1-202ENST00000409776 ABTB1Q969K4 478 aaPredicted RBP4.73□□□□□ -1.65
RGPD1-202ENST00000409776 MAML3Q96JK9 1138 aa4.73□□□□□ -1.65
RGPD1-202ENST00000409776 BAG1Q99933 345 aaPredicted RBP4.73□□□□□ -1.65
RGPD1-202ENST00000409776 PPP1R12CQ9BZL4 782 aa4.73□□□□□ -1.65
RGPD1-202ENST00000409776 ELL2O00472 640 aaPredicted RBP4.73□□□□□ -1.65
RGPD1-202ENST00000409776 CFAP157Q5JU67 520 aa4.73□□□□□ -1.65
RGPD1-202ENST00000409776 MAP3K21Q5TCX8 1036 aa4.73□□□□□ -1.65
RGPD1-202ENST00000409776 CCDC129Q6ZRS4 1044 aa4.73□□□□□ -1.65
RGPD1-202ENST00000409776 LTV1Q96GA3 475 aaPredicted RBP4.73□□□□□ -1.65
RGPD1-202ENST00000409776 NOL10Q9BSC4 688 aaKnown RBP4.73□□□□□ -1.65
RGPD1-202ENST00000409776 CRACR2AQ9BSW2 395 aa4.73□□□□□ -1.65
RGPD1-202ENST00000409776 GOLGA6AQ9NYA3 693 aa4.73□□□□□ -1.65
RGPD1-202ENST00000409776 CLIP2Q9UDT6 1046 aa4.73□□□□□ -1.65
RGPD1-202ENST00000409776 APPL1Q9UKG1 709 aa4.73□□□□□ -1.65
RGPD1-202ENST00000409776 CAPN11Q9UMQ6 739 aa4.73□□□□□ -1.65
RGPD1-202ENST00000409776 SLC8A1P32418 973 aa4.73□□□□□ -1.65
RGPD1-202ENST00000409776 UBE2Q1Q7Z7E8 422 aa4.73□□□□□ -1.65
RGPD1-202ENST00000409776 PFDN4Q9NQP4 134 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms